IP06608.complete Sequence
819 bp (819 high quality bases) assembled on 2005-03-09
GenBank Submission: BT022573
> IP06608.complete
AGCAGTATCAAATTTTCAACATGTCCGCGACGAGCCTTGTAACCATTAAG
TCGATCCCCTCAGCGGGAGATGTCCTGCGGGGTAAAAATGTACCAGTTCA
CCGCCTCAACGCGAAGTTTGTGGCCAAGGCCCAGGAGAAGGCTAAGAAAG
TGGAGGAATTCCTGACTAGGACGAAGACCACTTCGTTGGTTTCCTTGTCA
GGACTTGCTTCCCGATATGAGTTCCATCGTCTCCAGGAGCTCGACGAGTG
GTATGAGCCAAGGATCAAGTTCCACGACGAGGCCGATGCCAGTTTGCATC
CCAGCTACGATATAAAGCACTTTCAGTAGTCAGTTAAGAAAGAACTTGCT
GAGTTACTTAGGTTTCCTGACACACCATTATTTCCAGCGATCTTAATTGC
TATGTGCGGTATCTGGACTCCAAAGCGAAATATGATAGGCAGTTCCTTCA
CGAAATGGAGCACATTATTGCCAATCAACGCAATATCTGCGACCAGTTTT
TCCTGAAGAAAATCCTGTGCTATAAAACAATGTGGCCCCCACTGCATACA
AAGAGGGAACTGAATAACTTTGTCTCAAAATTCTTTCAACTGCCTCCTAA
GGAAAAACGTCGCGTCGAGTATCTGTTGAAAACGGATTTAAGTCTGGGTT
GCTAAAACTGATCCAATTGCAAAGTAAATGAGCCTTTTTATTCCACTTGG
AAATGGTTTAATTAGCTCATTTAATTTTGCAATTATTCTCTGCAAAACTG
ATAAAATTACCTTATGGAAAATTGTACAGCCAATAAATTTAATTATGCAA
TTAAAAAAAAAAAAAAAAA
IP06608.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 17:38:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11286-RA | 835 | CG11286-RA | 441..835 | 388..782 | 1975 | 100 | Plus |
CG11286-RA | 835 | CG11286-RA | 113..440 | 1..328 | 1640 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 02:41:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3R | 27901430 | chr3R | 3597271..3597780 | 510..1 | 2550 | 100 | Minus |
chr3R | 27901430 | chr3R | 3596920..3597211 | 802..511 | 1460 | 100 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:49:13 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 02:41:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 7771211..7771720 | 510..1 | 2550 | 100 | Minus |
3R | 32079331 | 3R | 7770857..7771151 | 805..511 | 1475 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:28:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 31820162 | 3R | 7512042..7512551 | 510..1 | 2550 | 100 | Minus |
3R | 31820162 | 3R | 7511688..7511982 | 805..511 | 1475 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-16 02:41:02 has no hits.
IP06608.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 02:41:55 Download gff for
IP06608.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3R | 3596920..3597211 | 511..802 | 100 | <- | Minus |
chr3R | 3597271..3597780 | 1..510 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:30:17 Download gff for
IP06608.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11286-RA | 1..308 | 21..328 | 100 | == | Plus |
CG11286-RA | 309..576 | 388..655 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:04:41 Download gff for
IP06608.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11286-RA | 1..308 | 21..328 | 100 | == | Plus |
CG11286-RA | 309..576 | 388..655 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:21:35 Download gff for
IP06608.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11286-RB | 1..309 | 21..329 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:49:47 Download gff for
IP06608.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11286-RA | 1..308 | 21..328 | 100 | == | Plus |
CG11286-RA | 309..576 | 388..655 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:16:42 Download gff for
IP06608.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11286-RB | 1..309 | 21..329 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:51:45 Download gff for
IP06608.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11286-RA | 28..355 | 1..328 | 100 | == | Plus |
CG11286-RA | 356..623 | 388..655 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:04:41 Download gff for
IP06608.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11286-RA | 28..355 | 1..328 | 100 | == | Plus |
CG11286-RA | 356..623 | 388..655 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:21:35 Download gff for
IP06608.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11286-RB | 37..838 | 1..802 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:49:47 Download gff for
IP06608.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11286-RA | 28..355 | 1..328 | 100 | == | Plus |
CG11286-RA | 356..623 | 388..655 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:16:42 Download gff for
IP06608.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11286-RB | 37..838 | 1..802 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:41:55 Download gff for
IP06608.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 7770860..7771151 | 511..802 | 100 | <- | Minus |
3R | 7771211..7771720 | 1..510 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:41:55 Download gff for
IP06608.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 7770860..7771151 | 511..802 | 100 | <- | Minus |
3R | 7771211..7771720 | 1..510 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:41:55 Download gff for
IP06608.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 7770860..7771151 | 511..802 | 100 | <- | Minus |
3R | 7771211..7771720 | 1..510 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:21:35 Download gff for
IP06608.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 3596582..3596873 | 511..802 | 100 | <- | Minus |
arm_3R | 3596933..3597442 | 1..510 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:24:28 Download gff for
IP06608.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 7511691..7511982 | 511..802 | 100 | <- | Minus |
3R | 7512042..7512551 | 1..510 | 100 | | Minus |
IP06608.pep Sequence
Translation from 2 to 328
> IP06608.pep
QYQIFNMSATSLVTIKSIPSAGDVLRGKNVPVHRLNAKFVAKAQEKAKKV
EEFLTRTKTTSLVSLSGLASRYEFHRLQELDEWYEPRIKFHDEADASLHP
SYDIKHFQ*
IP06608.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 15:29:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF17287-PA | 161 | GF17287-PA | 37..120 | 22..108 | 164 | 43.7 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 15:29:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG25006-PA | 191 | GG25006-PA | 1..102 | 7..108 | 409 | 73.5 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:37:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11286-PB | 102 | CG11286-PB | 1..102 | 7..108 | 520 | 100 | Plus |
CG11286-PA | 191 | CG11286-PA | 1..102 | 7..108 | 520 | 100 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 15:29:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM10461-PA | 191 | GM10461-PA | 1..102 | 7..108 | 424 | 86.3 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 15:29:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD19465-PA | 191 | GD19465-PA | 1..102 | 7..108 | 417 | 85.3 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 15:29:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE25775-PA | 191 | GE25775-PA | 1..102 | 7..108 | 434 | 78.4 | Plus |
IP06608.hyp Sequence
Translation from 2 to 328
> IP06608.hyp
QYQIFNMSATSLVTIKSIPSAGDVLRGKNVPVHRLNAKFVAKAQEKAKKV
EEFLTRTKTTSLVSLSGLASRYEFHRLQELDEWYEPRIKFHDEADASLHP
SYDIKHFQ*
IP06608.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 09:58:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11286-PB | 102 | CG11286-PB | 1..102 | 7..108 | 520 | 100 | Plus |
CG11286-PA | 191 | CG11286-PA | 1..102 | 7..108 | 520 | 100 | Plus |