Clone IP06949 Report

Search the DGRC for IP06949

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:69
Well:49
Vector:pOT2
Associated Gene/TranscriptOsi5-RA
Protein status:IP06949.pep: gold
Preliminary Size:609
Sequenced Size:1029

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG15590 2005-01-01 Successful iPCR screen
Osi5 2008-04-29 Release 5.5 accounting
Osi5 2008-08-15 Release 5.9 accounting
Osi5 2008-12-18 5.12 accounting

Clone Sequence Records

IP06949.complete Sequence

1029 bp (1029 high quality bases) assembled on 2006-06-12

GenBank Submission: BT028782

> IP06949.complete
CGGCAGCCAAGCGCATCCCACGGCTGTCCGACCAACTGACCGTTGAAAAT
TGGAAAAATTGCAACGGCCGGTGAAGAAGAAAATTGCACGGCCGAGGCAA
AAAGCAGAGAAACGCGAACTGAAGGCACATTTCTTTCTTTCCAGAAGCAG
CATTGTTTTAATTTACAATTGTGACAATTCGGCCGGGGACGCTTGACTGA
CTTCGCCTCCTCCGTTTTCCCCCTGGGAAAGTGCGCCGTGGAAATGCGAG
CTATAAAAAATGACCGGGCAATTGTCAAGGCTTTTAGTTGAACTTCAAGC
GTTTTGGCAACATGTTCCGCACTTTTCCTCTGCTCTGTTTGCTGTTCCTT
ACGGCTGTCCGTTCCGAAAACTGTGATCAGGATGCCGGTGCCACGCTATA
TTGTCGCGGTGAACGAGCTCTGCGAAATGTCTTGCGGAATTTAAATCGCA
GTGATAAACCCCTTGTGGTGATTAGAGGATTGGAGATAGTTCCGCTGCAG
AACAATTCAATTTCTGATGAGGAGCCGGATCAGGAGCAGGGTCTTTTGGA
CAGTCTATCCTTCTATCTGCGCACCCACGAAATCAATGTAAAGCTGGCAG
ATCTCCTGGAGGACGAGTCCCAAGTTTCAGAAGCCCGCAAAAAGGACAAG
GGCCAGGGAATGCTGTTGGCAATGGCTCTGATGTTTGGCAAGATGATGGC
CGTAATGGGGTTGGGCGGCATCGCGGCATTGGCCATGAAGGCACTGGGCG
TGTCCTTGGTGGCTCTGATGATGGCCGGGATGCTGGGTCTTAAGACAGCC
GCCCAGCATGGCGGAGAGTCTAGTCACAGCATATCGTATGTGACCGGCGA
GGGACATCACCACAAACGGAGGCGCCGCTCGTCCGGCCAACAACCCTTGG
CTTACAGAGGCTGGGACTGAGGCACTGAGGGGCCCATGATGTTATCGTGC
ATTTTGTTAGTTCTCATGTAGCACTTAAATAATTTAATAATTTATCCATC
ATGCAACAGAAAAAAAAAAAAAAAAAAAA

IP06949.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:13:23
Subject Length Description Subject Range Query Range Score Percent Strand
Osi5.c 1477 Osi5.c 466..1475 1..1010 5050 100 Plus
Osi5.a 1215 Osi5.a 1..935 76..1010 4675 100 Plus
Osi5.b 937 Osi5.b 1..935 76..1010 4675 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 23:45:34
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 2053047..2053676 1..630 3150 100 Plus
chr3R 27901430 chr3R 2054095..2054480 624..1009 1930 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:50:03 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 23:45:32
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 6227395..6228024 1..630 3150 100 Plus
3R 32079331 3R 6228443..6228829 624..1010 1935 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:07:09
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 5968226..5968855 1..630 3150 100 Plus
3R 31820162 3R 5969274..5969660 624..1010 1935 100 Plus
Blast to na_te.dros performed on 2019-03-15 23:45:32 has no hits.

IP06949.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 23:46:25 Download gff for IP06949.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 2053047..2053676 1..630 100 -> Plus
chr3R 2054102..2054480 631..1009 94   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:31:01 Download gff for IP06949.complete
Subject Subject Range Query Range Percent Splice Strand
Osi5-RA 1..609 312..920 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:21:33 Download gff for IP06949.complete
Subject Subject Range Query Range Percent Splice Strand
Osi5-RA 1..609 312..920 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:45:01 Download gff for IP06949.complete
Subject Subject Range Query Range Percent Splice Strand
Osi5-RA 1..609 312..920 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 15:40:01 Download gff for IP06949.complete
Subject Subject Range Query Range Percent Splice Strand
Osi5-RA 1..609 312..920 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:47:39 Download gff for IP06949.complete
Subject Subject Range Query Range Percent Splice Strand
Osi5-RA 1..609 312..920 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:50:06 Download gff for IP06949.complete
Subject Subject Range Query Range Percent Splice Strand
Osi5-RA 1..609 312..920 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:21:33 Download gff for IP06949.complete
Subject Subject Range Query Range Percent Splice Strand
Osi5-RA 1..1009 1..1009 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:45:01 Download gff for IP06949.complete
Subject Subject Range Query Range Percent Splice Strand
Osi5-RA 1..892 118..1009 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 15:40:01 Download gff for IP06949.complete
Subject Subject Range Query Range Percent Splice Strand
Osi5-RA 1..609 312..920 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:47:39 Download gff for IP06949.complete
Subject Subject Range Query Range Percent Splice Strand
Osi5-RA 1..892 118..1009 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:46:25 Download gff for IP06949.complete
Subject Subject Range Query Range Percent Splice Strand
3R 6227395..6228024 1..630 100 -> Plus
3R 6228450..6228828 631..1009 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:46:25 Download gff for IP06949.complete
Subject Subject Range Query Range Percent Splice Strand
3R 6227395..6228024 1..630 100 -> Plus
3R 6228450..6228828 631..1009 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:46:25 Download gff for IP06949.complete
Subject Subject Range Query Range Percent Splice Strand
3R 6227395..6228024 1..630 100 -> Plus
3R 6228450..6228828 631..1009 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:45:01 Download gff for IP06949.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 2053117..2053746 1..630 100 -> Plus
arm_3R 2054172..2054550 631..1009 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:50:14 Download gff for IP06949.complete
Subject Subject Range Query Range Percent Splice Strand
3R 5968226..5968855 1..630 100 -> Plus
3R 5969281..5969659 631..1009 100   Plus

IP06949.pep Sequence

Translation from 311 to 919

> IP06949.pep
MFRTFPLLCLLFLTAVRSENCDQDAGATLYCRGERALRNVLRNLNRSDKP
LVVIRGLEIVPLQNNSISDEEPDQEQGLLDSLSFYLRTHEINVKLADLLE
DESQVSEARKKDKGQGMLLAMALMFGKMMAVMGLGGIAALAMKALGVSLV
ALMMAGMLGLKTAAQHGGESSHSISYVTGEGHHHKRRRRSSGQQPLAYRG
WD*

IP06949.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 18:56:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF16377-PA 204 GF16377-PA 1..204 1..202 825 82 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 18:56:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG13143-PA 202 GG13143-PA 1..201 1..201 997 93.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 18:56:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH14020-PA 219 GH14020-PA 18..217 14..201 633 68.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:55:31
Subject Length Description Subject Range Query Range Score Percent Strand
Osi5-PA 202 CG15590-PA 1..202 1..202 1025 100 Plus
Osi5-PB 201 CG15590-PB 1..201 1..202 1008 99.5 Plus
Osi8-PA 274 CG15591-PA 130..260 66..201 144 31.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 18:56:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI24393-PA 228 GI24393-PA 27..226 19..201 647 66.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 18:56:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL24057-PA 212 GL24057-PA 14..212 13..202 792 77.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 18:56:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA13832-PA 212 GA13832-PA 14..212 13..202 792 77.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 18:56:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM10866-PA 205 GM10866-PA 1..146 1..146 697 90.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 18:56:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD19847-PA 202 GD19847-PA 1..202 1..202 1044 97 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 18:56:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ14249-PA 210 GJ14249-PA 22..208 19..201 670 70.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 18:56:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13035-PA 212 GK13035-PA 1..210 1..201 721 69.6 Plus
Dwil\GK17693-PA 111 GK17693-PA 8..100 7..101 295 62.5 Plus
Dwil\GK16065-PA 112 GK16065-PA 8..107 7..108 294 59.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 18:56:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE10188-PA 202 GE10188-PA 1..202 1..202 1013 94.6 Plus

IP06949.hyp Sequence

Translation from 311 to 919

> IP06949.hyp
MFRTFPLLCLLFLTAVRSENCDQDAGATLYCRGERALRNVLRNLNRSDKP
LVVIRGLEIVPLQNNSISDEEPDQEQGLLDSLSFYLRTHEINVKLADLLE
DESQVSEARKKDKGQGMLLAMALMFGKMMAVMGLGGIAALAMKALGVSLV
ALMMAGMLGLKTAAQHGGESSHSISYVTGEGHHHKRRRRSSGQQPLAYRG
WD*

IP06949.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 10:04:13
Subject Length Description Subject Range Query Range Score Percent Strand
Osi5-PA 202 CG15590-PA 1..202 1..202 1025 100 Plus
Osi5-PB 201 CG15590-PB 1..201 1..202 1008 99.5 Plus
Osi8-PA 274 CG15591-PA 130..260 66..201 144 31.9 Plus