Clone IP07046 Report

Search the DGRC for IP07046

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:70
Well:46
Vector:pOT2
Associated Gene/TranscriptCG15484-RA
Protein status:IP07046.pep: gold
Preliminary Size:621
Sequenced Size:880

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG15484 2005-01-01 Successful iPCR screen
CG15484 2008-04-29 Release 5.5 accounting

Clone Sequence Records

IP07046.complete Sequence

880 bp (880 high quality bases) assembled on 2005-01-13

GenBank Submission: BT022650

> IP07046.complete
AAAAGCATTTCCGGGAAATGAAAATAAGGCTGTGAGAATACTATAAGCAA
CTGAAATCATCATGGCTTGGGTTCCCACATCACGATTCGAGCACGATCTG
GTGCAGTTGGAGCCGCACTTTAATCTGGTCCATGGACAGATCGCCTATGA
ACTGAGGAAGAAAGAGGAATTCTCAGAATCCGTTCCCATTCATACCTATG
AGCTTTTGACAGCCCGCGAGGATCTGCTTGGATATGGCACGCGGGGTGGA
AAGGGCCGAGAGATTCGTCAAAGTCTGCAAATGATGGAGACGATTCAGAG
AGTAGCTGGCACCAAGCCGCTGGGAGAGCACGCCACAATGGAGGACTGGG
AGGACACCACAATGGTGGACGTGGAGGCGATTGCCATCATCCGGAACTTC
GGAAGAATGACCCTGAAACAGGACTCACTGACACTCCAGCCGCAGATCAG
CTTACCTGCGGTTGCTCCAAATGAAAGCCAGCGATTTCCTTTAATCACAG
ATCGCGACTTCTTCACGCCACGAAAGATTCGTAGACCAAAGGATCTTCCG
CCAGTGGAGAACAGTCCGGATAACTCAGCCGATGACTCATTTCACACCGC
TAAAAGTCTGAGCAACTGCATCTGGCTGAACGGATTAAAATATCCAGATA
AGACCAGCAAGGGCGAAATTCAGAATACATAGATACTTCATTAAATTACT
AACTAACAAACCTTGAAAATAACTTGAAGATTTATTTTACTAAATCCGAT
TGAGCATGTACTCACATTATTTGCAATGAATATTGTCGTTCGTATGTAAT
AGAATTTATTTATATGCTTTTTTTTTCTTTTTTTAATAATAGATACGAAT
ATCCATCCTATCAAAAAAAAAAAAAAAAAA

IP07046.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:45:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG15484-RA 792 CG15484-RA 1..792 1..792 3960 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 09:40:47
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 12705500..12706291 792..1 3960 100 Minus
chr2L 23010047 chr2L 22390210..22390263 367..314 210 92.6 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:50:30 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 09:40:45
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 12706799..12707590 792..1 3960 100 Minus
2L 23513712 2L 22391702..22391755 367..314 210 92.6 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:35:24
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 12706799..12707590 792..1 3960 100 Minus
2L 23513712 2L 22391702..22391755 367..314 210 92.5 Minus
2L 23513712 2L 22391583..22391656 513..440 160 81 Minus
2L 23513712 2L 22391901..22391983 127..45 160 79.5 Minus
Blast to na_te.dros performed on 2019-03-16 09:40:45 has no hits.

IP07046.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 09:41:35 Download gff for IP07046.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 12705500..12706291 1..792 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:31:21 Download gff for IP07046.complete
Subject Subject Range Query Range Percent Splice Strand
CG15484-RA 1..621 62..682 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:14:41 Download gff for IP07046.complete
Subject Subject Range Query Range Percent Splice Strand
CG15484-RA 1..621 62..682 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 09:58:43 Download gff for IP07046.complete
Subject Subject Range Query Range Percent Splice Strand
CG15484-RA 1..621 62..682 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:59:07 Download gff for IP07046.complete
Subject Subject Range Query Range Percent Splice Strand
CG15484-RA 1..621 62..682 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 09:43:49 Download gff for IP07046.complete
Subject Subject Range Query Range Percent Splice Strand
CG15484-RA 1..621 62..682 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:12:02 Download gff for IP07046.complete
Subject Subject Range Query Range Percent Splice Strand
CG15484-RA 1..621 62..682 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:14:41 Download gff for IP07046.complete
Subject Subject Range Query Range Percent Splice Strand
CG15484-RA 1..792 1..792 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:58:43 Download gff for IP07046.complete
Subject Subject Range Query Range Percent Splice Strand
CG15484-RA 122..913 1..792 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:59:07 Download gff for IP07046.complete
Subject Subject Range Query Range Percent Splice Strand
CG15484-RA 1..621 62..682 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:43:49 Download gff for IP07046.complete
Subject Subject Range Query Range Percent Splice Strand
CG15484-RA 122..913 1..792 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:41:35 Download gff for IP07046.complete
Subject Subject Range Query Range Percent Splice Strand
2L 12706799..12707590 1..792 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:41:35 Download gff for IP07046.complete
Subject Subject Range Query Range Percent Splice Strand
2L 12706799..12707590 1..792 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:41:35 Download gff for IP07046.complete
Subject Subject Range Query Range Percent Splice Strand
2L 12706799..12707590 1..792 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:58:43 Download gff for IP07046.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 12706799..12707590 1..792 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:34:40 Download gff for IP07046.complete
Subject Subject Range Query Range Percent Splice Strand
2L 12706799..12707590 1..792 100   Minus

IP07046.pep Sequence

Translation from 61 to 681

> IP07046.pep
MAWVPTSRFEHDLVQLEPHFNLVHGQIAYELRKKEEFSESVPIHTYELLT
AREDLLGYGTRGGKGREIRQSLQMMETIQRVAGTKPLGEHATMEDWEDTT
MVDVEAIAIIRNFGRMTLKQDSLTLQPQISLPAVAPNESQRFPLITDRDF
FTPRKIRRPKDLPPVENSPDNSADDSFHTAKSLSNCIWLNGLKYPDKTSK
GEIQNT*

IP07046.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 16:02:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF14004-PA 282 GF14004-PA 1..208 1..191 468 49.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 16:02:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG10241-PA 237 GG10241-PA 1..200 1..200 832 77 Plus
Dere\GG22758-PA 271 GG22758-PA 1..190 1..191 496 51 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 16:02:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH25198-PA 206 GH25198-PA 1..165 1..158 342 43 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:48:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG15484-PA 206 CG15484-PA 1..206 1..206 1082 100 Plus
squ-PC 241 CG4711-PC 1..181 1..182 457 49.7 Plus
squ-PB 241 CG4711-PB 1..181 1..182 457 49.7 Plus
squ-PA 241 CG4711-PA 1..181 1..182 457 49.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 16:02:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI17267-PA 232 GI17267-PA 1..189 1..176 358 44.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 16:02:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL12351-PA 278 GL12351-PA 1..167 1..157 330 44.4 Plus
Dper\GL19649-PA 149 GL19649-PA 1..131 1..127 291 45.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 16:02:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA13764-PA 278 GA13764-PA 1..167 1..157 333 43.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 16:02:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM26009-PA 125 GM26009-PA 1..112 1..130 462 71.5 Plus
Dsec\GM17192-PA 242 GM17192-PA 1..186 1..180 455 50.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 16:02:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22100-PA 143 GD22100-PA 1..130 1..130 551 79.2 Plus
Dsim\GD24068-PA 242 GD24068-PA 1..186 1..180 452 50.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 16:02:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22736-PA 260 GJ22736-PA 1..163 1..158 360 45.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 16:02:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK18923-PA 266 GK18923-PA 1..207 1..188 371 40.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 16:02:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12753-PA 262 GE12753-PA 1..190 1..191 469 50.2 Plus
Dyak\GE12077-PA 137 GE12077-PA 1..137 1..196 399 48 Plus

IP07046.hyp Sequence

Translation from 61 to 681

> IP07046.hyp
MAWVPTSRFEHDLVQLEPHFNLVHGQIAYELRKKEEFSESVPIHTYELLT
AREDLLGYGTRGGKGREIRQSLQMMETIQRVAGTKPLGEHATMEDWEDTT
MVDVEAIAIIRNFGRMTLKQDSLTLQPQISLPAVAPNESQRFPLITDRDF
FTPRKIRRPKDLPPVENSPDNSADDSFHTAKSLSNCIWLNGLKYPDKTSK
GEIQNT*

IP07046.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 10:07:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG15484-PA 206 CG15484-PA 1..206 1..206 1082 100 Plus
squ-PC 241 CG4711-PC 1..181 1..182 457 49.7 Plus
squ-PB 241 CG4711-PB 1..181 1..182 457 49.7 Plus
squ-PA 241 CG4711-PA 1..181 1..182 457 49.7 Plus