IP07112.complete Sequence
738 bp (738 high quality bases) assembled on 2005-03-09
GenBank Submission: BT022670
> IP07112.complete
AAAGGATAGGTCATTACGATTGAGGACGACGACCAACTGCGCTAAGTCAT
AATTAAGCCAAAGATGGAAAAGAATCTACCGGCATCCATTTCGAAGAACA
AGAGATTCGAATCGACGATGATGAGTTCTCCCGTGCCAAGTTTTGCCAAG
TCCAATGGGATGAAAAAGAAGACTACGACCTTTTCACGATTCATCCGCAC
CGATCGTGCCGCAGGGGGCTTGACCAATGGGGTGAAAAAGAAGACTGTAT
CCGTTTCGCGATTCAGCCGCGTCCATCGTGTCGCAGAGGACCTGACCCGT
GAATTGGCCGGCATGTCGTTGAAAAAACAGGCTGTGCAACCGCGTCGTCG
TTATTCTTTCACCAATGAGTTCCCGGATGATCCACCAAAGCCAGCTCCCA
ACCGTCGCTGCTCGCTTGTCCGCCGCAACTCAATTAACCTCCCAATTGAG
TCCAATTTTGATATGTCCGTGCTGATGGATGATGATGATGAGGAGGAGGA
GGATGATGAGATGATGATGGCGAAGGAGGAGGATGATGAGATGATGATGG
CGAAGGAGGAGGAGGATGAAGTACAGGATCTAAATATGACCAGTGGCTCC
ATCAACCCAGCTACATCGACCTCGAAAGGCGCCATCCCGAAGCCGCCCAA
AAATTTCGGCTTTACCTTCTAGAAATGCAAGGACTAATAAATCAAGCTAG
CTGAGCGCTACGACTATTATAAAAAAAAAAAAAAAAAA
IP07112.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 17:41:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14810-RA | 750 | CG14810-RA | 29..750 | 1..722 | 3610 | 100 | Plus |
CG14811-RA | 651 | CG14811-RA | 383..545 | 335..497 | 530 | 88.3 | Plus |
CG14811-RA | 651 | CG14811-RA | 1..207 | 118..324 | 495 | 82.6 | Plus |
CG14811-RA | 651 | CG14811-RA | 536..651 | 557..672 | 370 | 87.9 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 19:39:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chrX | 22417052 | chrX | 1713366..1713993 | 720..93 | 3095 | 99.5 | Minus |
chrX | 22417052 | chrX | 1715815..1716045 | 324..94 | 615 | 84.4 | Minus |
chrX | 22417052 | chrX | 1715477..1715639 | 497..335 | 515 | 87.7 | Minus |
chrX | 22417052 | chrX | 1715323..1715486 | 720..557 | 490 | 86.6 | Minus |
chrX | 22417052 | chrX | 1714054..1714111 | 93..36 | 290 | 100 | Minus |
chrX | 22417052 | chrX | 1716109..1716164 | 91..36 | 190 | 89.3 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:50:50 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 19:39:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 1819493..1820122 | 722..93 | 3150 | 100 | Minus |
X | 23542271 | X | 1821944..1822174 | 324..94 | 615 | 84.4 | Minus |
X | 23542271 | X | 1821606..1821768 | 497..335 | 530 | 88.3 | Minus |
X | 23542271 | X | 1821450..1821615 | 722..557 | 500 | 86.7 | Minus |
X | 23542271 | X | 1820183..1820240 | 93..36 | 290 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:31:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23527363 | X | 1827591..1828220 | 722..93 | 3150 | 100 | Minus |
X | 23527363 | X | 1830042..1830272 | 324..94 | 615 | 84.4 | Minus |
X | 23527363 | X | 1829704..1829866 | 497..335 | 530 | 88.3 | Minus |
X | 23527363 | X | 1829548..1829713 | 722..557 | 500 | 86.7 | Minus |
X | 23527363 | X | 1828281..1828338 | 93..36 | 290 | 100 | Minus |
X | 23527363 | X | 1828405..1828439 | 35..1 | 175 | 100 | Minus |
X | 23527363 | X | 1830336..1830391 | 91..36 | 175 | 87.5 | Minus |
X | 23527363 | X | 1830457..1830491 | 35..1 | 160 | 97.1 | Minus |
Blast to na_te.dros performed on 2019-03-16 19:39:29 has no hits.
IP07112.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 19:40:27 Download gff for
IP07112.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chrX | 1713366..1713536 | 550..720 | 100 | == | Minus |
chrX | 1713609..1713992 | 94..477 | 99 | <- | Minus |
chrX | 1714054..1714111 | 36..93 | 100 | <- | Minus |
chrX | 1714178..1714212 | 1..35 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:31:36 Download gff for
IP07112.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14810-RA | 1..609 | 64..672 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:08:30 Download gff for
IP07112.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14810-RA | 1..609 | 64..672 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:44:30 Download gff for
IP07112.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14810-RA | 1..609 | 64..672 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:53:22 Download gff for
IP07112.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14810-RA | 1..609 | 64..672 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:38:07 Download gff for
IP07112.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14810-RA | 1..609 | 64..672 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:59:22 Download gff for
IP07112.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14810-RA | 1..720 | 1..720 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:08:30 Download gff for
IP07112.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14810-RA | 1..720 | 1..720 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:44:30 Download gff for
IP07112.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14810-RA | 1..720 | 1..720 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:53:22 Download gff for
IP07112.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14810-RA | 1..720 | 1..720 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:38:07 Download gff for
IP07112.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14810-RA | 1..720 | 1..720 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:40:27 Download gff for
IP07112.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 1820183..1820240 | 36..93 | 100 | <- | Minus |
X | 1820307..1820341 | 1..35 | 100 | | Minus |
X | 1819495..1820121 | 94..720 | 100 | <- | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:40:27 Download gff for
IP07112.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 1820183..1820240 | 36..93 | 100 | <- | Minus |
X | 1820307..1820341 | 1..35 | 100 | | Minus |
X | 1819495..1820121 | 94..720 | 100 | <- | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:40:27 Download gff for
IP07112.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 1820183..1820240 | 36..93 | 100 | <- | Minus |
X | 1820307..1820341 | 1..35 | 100 | | Minus |
X | 1819495..1820121 | 94..720 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:44:30 Download gff for
IP07112.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 1713528..1714154 | 94..720 | 100 | <- | Minus |
arm_X | 1714216..1714273 | 36..93 | 100 | <- | Minus |
arm_X | 1714340..1714374 | 1..35 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:28:23 Download gff for
IP07112.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 1827593..1828219 | 94..720 | 100 | <- | Minus |
X | 1828281..1828338 | 36..93 | 100 | <- | Minus |
X | 1828405..1828439 | 1..35 | 100 | | Minus |
IP07112.hyp Sequence
Translation from 63 to 671
> IP07112.hyp
MEKNLPASISKNKRFESTMMSSPVPSFAKSNGMKKKTTTFSRFIRTDRAA
GGLTNGVKKKTVSVSRFSRVHRVAEDLTRELAGMSLKKQAVQPRRRYSFT
NEFPDDPPKPAPNRRCSLVRRNSINLPIESNFDMSVLMDDDDEEEEDDEM
MMAKEEDDEMMMAKEEEDEVQDLNMTSGSINPATSTSKGAIPKPPKNFGF
TF*
IP07112.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 10:09:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14810-PA | 202 | CG14810-PA | 1..202 | 1..202 | 1035 | 100 | Plus |
CG14810-PB | 201 | CG14810-PB | 1..201 | 1..202 | 1018 | 99.5 | Plus |
CG14811-PB | 237 | CG14811-PB | 5..237 | 1..202 | 487 | 48.2 | Plus |
IP07112.pep Sequence
Translation from 63 to 671
> IP07112.pep
MEKNLPASISKNKRFESTMMSSPVPSFAKSNGMKKKTTTFSRFIRTDRAA
GGLTNGVKKKTVSVSRFSRVHRVAEDLTRELAGMSLKKQAVQPRRRYSFT
NEFPDDPPKPAPNRRCSLVRRNSINLPIESNFDMSVLMDDDDEEEEDDEM
MMAKEEDDEMMMAKEEEDEVQDLNMTSGSINPATSTSKGAIPKPPKNFGF
TF*
IP07112.pep Blast Records
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:19:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14810-PA | 202 | CG14810-PA | 1..202 | 1..202 | 1035 | 100 | Plus |
CG14810-PB | 201 | CG14810-PB | 1..201 | 1..202 | 1018 | 99.5 | Plus |
CG14811-PB | 237 | CG14811-PB | 5..237 | 1..202 | 487 | 48.2 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 15:43:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM18953-PA | 479 | GM18953-PA | 302..479 | 12..202 | 473 | 63.2 | Plus |
Dsec\GM18953-PA | 479 | GM18953-PA | 105..280 | 4..140 | 382 | 51.7 | Plus |
Dsec\GM18953-PA | 479 | GM18953-PA | 6..87 | 2..91 | 211 | 58.9 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 15:43:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD16413-PA | 177 | GD16413-PA | 6..177 | 2..202 | 474 | 58.1 | Plus |
Dsim\GD16412-PA | 225 | GD16412-PA | 5..225 | 1..202 | 460 | 47.8 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 15:43:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE16510-PA | 241 | GE16510-PA | 6..236 | 2..202 | 227 | 33.7 | Plus |