Clone IP07229 Report

Search the DGRC for IP07229

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:72
Well:29
Vector:pOT2
Associated Gene/TranscriptCG32718-RB
Protein status:IP07229.pep: gold
Preliminary Size:534
Sequenced Size:982

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG32718 2005-01-01 Successful iPCR screen
CG32718 2008-04-29 Release 5.5 accounting
CG32718 2008-08-15 Release 5.9 accounting
CG32718 2008-12-18 5.12 accounting

Clone Sequence Records

IP07229.complete Sequence

982 bp (982 high quality bases) assembled on 2006-02-24

GenBank Submission: BT025134

> IP07229.complete
TTTTAGCTATCAAACAAATAATTCAAATATATATTTTTAAAATTTGTTCA
AAAACGAAACCAAAGCGAGCATGAGGAAAATGCCTCTTGGACTACCCATT
TGGACACCATTGTTCATCCTTTTCTTGCTTTTCCTGGCCGGCGTTTGGGG
TGTGAATCGCAATGGTCTGCTGGACTTTTATCATGAACAGGTTCATGGAA
CTCCTTTAACTAAGAAGGAAGTCGAGTGTCCAGAGGATGGAATTATGAAC
ATCAAGCAAAGCCGTTACGATAGATCACTGAATCCTTTCAAGGCATTTCT
GAATTGGCCGGATAGACACAAAGTACATAAGGATGATAAATATAAGCCAC
TTGAAGGTGATTTGTATGGCCACGAAGAGCCTCTATTTGATTTTGAATTG
ACAAAGTACCAAGCCGGTGCACCGCTAGTTGATAACAGAGCTGATCACTT
TTTAGCCCAAGATTATAAATCAGACTTTGATCGCAAGCTGGGTGTAATGG
ATCATGATTATCCCGATCATTTTAAGCTTAATGCAGATCACTTTAATCTT
GATGCAGATCAGTTTAATACGGTGTCAGACCGCTTGAATCAGAATGAAAA
TCATTTCAGTCTGGATGCAGATCAATTAAATCGTGATGCCAATCAATTCA
ACGTGAATACAAATAACTTTAATCAGCATCGTGACGTGGATGTGCTTGAC
AACTTTCAAGCTAACAAGCCCGAATTGGTAAATAGTCCCATGATGGACTA
TAAACGTGAATTCGCCAGCGATGAAGCTAATCCTTATGTTGAGAGCCTTC
AGCAGCGCTATGAGCCCTTACCACATGCTTATAAGGACTAGTTACATTAG
TTACATTAGCCTTCATACGAGGATGTATATTTTTCTATAAATTGTTATGT
ATTTAAAGCTTACAATTTGTTAAAATACATATTTCGAGTTCTTAAAGAGC
AAGTTACAGTTCACAAAAAAAAAAAAAAAAAA

IP07229.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:46:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG32718-RB 963 CG32718-RB 1..963 1..963 4815 100 Plus
CG32718.b 995 CG32718.b 16..981 1..963 4760 99.6 Plus
CG32718.a 1007 CG32718.a 179..993 149..963 4075 100 Plus
CG32718.a 1007 CG32718.a 16..166 1..151 755 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 17:23:34
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 7670567..7670992 285..710 2130 100 Plus
chrX 22417052 chrX 7671049..7671303 709..963 1275 100 Plus
chrX 22417052 chrX 7670137..7670287 1..151 755 100 Plus
chrX 22417052 chrX 7670368..7670503 149..284 680 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:51:29 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 17:23:32
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 7778635..7779060 285..710 2130 100 Plus
X 23542271 X 7779117..7779371 709..963 1275 100 Plus
X 23542271 X 7778205..7778355 1..151 755 100 Plus
X 23542271 X 7778436..7778571 149..284 680 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:36:13
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 7786733..7787158 285..710 2130 100 Plus
X 23527363 X 7787215..7787469 709..963 1275 100 Plus
X 23527363 X 7786303..7786453 1..151 755 100 Plus
X 23527363 X 7786534..7786669 149..284 680 100 Plus
Blast to na_te.dros performed 2019-03-15 17:23:33
Subject Length Description Subject Range Query Range Score Percent Strand
rover 7318 rover ROVER 7318bp 1151..1212 7..68 121 66.1 Plus
ZAM 8435 ZAM DMZAM 8435bp Derived from AJ000387 (e1237231) ((Rel. 54, Last updated, Version 1). 6847..6991 961..821 120 58.5 Minus

IP07229.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 17:24:29 Download gff for IP07229.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 7670567..7670992 285..710 100 -> Plus
chrX 7670369..7670503 150..284 100 -> Plus
chrX 7671051..7671303 711..964 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:32:02 Download gff for IP07229.complete
Subject Subject Range Query Range Percent Splice Strand
CG32718-RB 1..771 71..841 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:16:01 Download gff for IP07229.complete
Subject Subject Range Query Range Percent Splice Strand
CG32718-RB 1..771 71..841 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:34:24 Download gff for IP07229.complete
Subject Subject Range Query Range Percent Splice Strand
CG32718-RB 1..771 71..841 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:00:28 Download gff for IP07229.complete
Subject Subject Range Query Range Percent Splice Strand
CG32718-RA 223..534 527..841 98   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:35:59 Download gff for IP07229.complete
Subject Subject Range Query Range Percent Splice Strand
CG32718-RB 1..771 71..841 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:14:38 Download gff for IP07229.complete
Subject Subject Range Query Range Percent Splice Strand
CG32718-RB 1..963 1..963 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:16:01 Download gff for IP07229.complete
Subject Subject Range Query Range Percent Splice Strand
CG32718-RB 1..963 1..963 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:34:24 Download gff for IP07229.complete
Subject Subject Range Query Range Percent Splice Strand
CG32718-RB 1..962 1..962 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:00:29 Download gff for IP07229.complete
Subject Subject Range Query Range Percent Splice Strand
CG32718-RA 223..534 527..841 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:35:59 Download gff for IP07229.complete
Subject Subject Range Query Range Percent Splice Strand
CG32718-RB 1..962 1..962 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:24:29 Download gff for IP07229.complete
Subject Subject Range Query Range Percent Splice Strand
X 7778205..7778353 1..149 100 -> Plus
X 7778437..7778571 150..284 100 -> Plus
X 7778635..7779060 285..710 100 -> Plus
X 7779119..7779371 711..964 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:24:29 Download gff for IP07229.complete
Subject Subject Range Query Range Percent Splice Strand
X 7778205..7778353 1..149 100 -> Plus
X 7778437..7778571 150..284 100 -> Plus
X 7778635..7779060 285..710 100 -> Plus
X 7779119..7779371 711..964 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:24:29 Download gff for IP07229.complete
Subject Subject Range Query Range Percent Splice Strand
X 7778205..7778353 1..149 100 -> Plus
X 7778437..7778571 150..284 100 -> Plus
X 7778635..7779060 285..710 100 -> Plus
X 7779119..7779371 711..964 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:34:24 Download gff for IP07229.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 7672238..7672386 1..149 100 -> Plus
arm_X 7672470..7672604 150..284 100 -> Plus
arm_X 7672668..7673093 285..710 100 -> Plus
arm_X 7673152..7673404 711..964 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:36:02 Download gff for IP07229.complete
Subject Subject Range Query Range Percent Splice Strand
X 7786733..7787158 285..710 100 -> Plus
X 7787217..7787469 711..964 99   Plus
X 7786303..7786451 1..149 100 -> Plus
X 7786535..7786669 150..284 100 -> Plus

IP07229.pep Sequence

Translation from 70 to 840

> IP07229.pep
MRKMPLGLPIWTPLFILFLLFLAGVWGVNRNGLLDFYHEQVHGTPLTKKE
VECPEDGIMNIKQSRYDRSLNPFKAFLNWPDRHKVHKDDKYKPLEGDLYG
HEEPLFDFELTKYQAGAPLVDNRADHFLAQDYKSDFDRKLGVMDHDYPDH
FKLNADHFNLDADQFNTVSDRLNQNENHFSLDADQLNRDANQFNVNTNNF
NQHRDVDVLDNFQANKPELVNSPMMDYKREFASDEANPYVESLQQRYEPL
PHAYKD*

IP07229.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 16:11:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF21029-PA 212 GF21029-PA 1..211 1..252 340 35.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 16:11:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG19660-PA 175 GG19660-PA 1..175 1..256 426 44.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:27:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG32718-PB 256 CG32718-PB 1..256 1..256 1405 100 Plus
CG32718-PD 257 CG32718-PD 1..257 1..256 1393 99.6 Plus
CG32718-PC 261 CG32718-PC 1..261 1..256 1389 98.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 16:11:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM17539-PA 211 GM17539-PA 1..211 1..256 645 59.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 16:11:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD16861-PA 177 GD16861-PA 1..177 1..256 449 46.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 16:12:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE15735-PA 316 GE15735-PA 1..316 1..256 808 57 Plus

IP07229.hyp Sequence

Translation from 70 to 840

> IP07229.hyp
MRKMPLGLPIWTPLFILFLLFLAGVWGVNRNGLLDFYHEQVHGTPLTKKE
VECPEDGIMNIKQSRYDRSLNPFKAFLNWPDRHKVHKDDKYKPLEGDLYG
HEEPLFDFELTKYQAGAPLVDNRADHFLAQDYKSDFDRKLGVMDHDYPDH
FKLNADHFNLDADQFNTVSDRLNQNENHFSLDADQLNRDANQFNVNTNNF
NQHRDVDVLDNFQANKPELVNSPMMDYKREFASDEANPYVESLQQRYEPL
PHAYKD*

IP07229.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 10:15:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG32718-PB 256 CG32718-PB 1..256 1..256 1405 100 Plus
CG32718-PD 257 CG32718-PD 1..257 1..256 1393 99.6 Plus
CG32718-PC 261 CG32718-PC 1..261 1..256 1389 98.1 Plus