Clone IP07257 Report

Search the DGRC for IP07257

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:72
Well:57
Vector:pOT2
Associated Gene/TranscriptCG5267-RA
Protein status:IP07257.pep: gold
Preliminary Size:537
Sequenced Size:787

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG5267 2005-01-01 Successful iPCR screen
CG5267 2008-04-29 Release 5.5 accounting
CG5267 2008-08-15 Release 5.9 accounting
CG5267 2008-12-18 5.12 accounting

Clone Sequence Records

IP07257.complete Sequence

787 bp (787 high quality bases) assembled on 2006-07-25

GenBank Submission: BT028783

> IP07257.complete
CATGGCCGAAGGTTTATTTTGTCGTACAGCTTATTGGAATTCTCTTTCAA
AAACATGTACTGATGGCAGAAGATTCTGCAGAGGACCAGATTACCTGGCC
GGATGACATTGCCGAGCCAACCTTGGAGTCTGAGTTGACCTGGCCCAATG
AACTTCCGGTAACAGTAACTAATGGCATGACTTTTCGCACCGCTCGAACC
TTGGATCATTTCGATGCTTTGCGAGACGATGACGAGTTCATGGAGAACCC
GCATAAAAAGGTTTTTGACGAATTTGATAGCCTGGAGCATAGATACCACA
TCGTTCATCCAATAGGTGAAGAAATAGCCCTCAAGCGGAACCCGCTCCCT
GAGGAGAAGTATATCAAGCAGCCCTTCAAGTTCGGCTGCTGTCACAACTC
CACATATGTGGGATGTGCTGGCGTTTGTCCGGAGACATGCGAATACCGCT
CCAAATACTGTGTACCGCTTTGCGGACCGCCTTGTCGCTGTAAGCGTGGT
TATGTCTACAATATTCCACATAGCGCATGTACTCTGCGCTCCGACTGTCC
CAAGGGGATCGTTCAGAGTAAGAACGGGATATACAGGGTATTTTTGTGAG
GTGGAGGATGTGATAAGGTGATTTGGGTTAGTGTGGTGGACTGATATATG
CTGTGGGTGTGCTGTGGTGTCGTGCCAATTTCGTTTGTTCTAATAAACCA
AGAAAGCCGAATGGATGCAAGCTAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

IP07257.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:13:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG5267-RA 723 CG5267-RA 1..723 1..723 3615 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 20:12:23
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 12642305..12643027 1..723 3495 98.9 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:51:33 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 20:12:20
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 16755101..16755825 1..725 3625 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:06:56
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 16756300..16757024 1..725 3625 100 Plus
Blast to na_te.dros performed on 2019-03-16 20:12:21 has no hits.

IP07257.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 20:13:17 Download gff for IP07257.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 12642305..12643027 1..723 98   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:32:05 Download gff for IP07257.complete
Subject Subject Range Query Range Percent Splice Strand
CG5267-RA 1..537 63..599 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:21:00 Download gff for IP07257.complete
Subject Subject Range Query Range Percent Splice Strand
CG5267-RA 1..537 63..599 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:52:40 Download gff for IP07257.complete
Subject Subject Range Query Range Percent Splice Strand
CG5267-RA 1..537 63..599 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 15:39:06 Download gff for IP07257.complete
Subject Subject Range Query Range Percent Splice Strand
CG5267-RA 1..537 63..599 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:54:58 Download gff for IP07257.complete
Subject Subject Range Query Range Percent Splice Strand
CG5267-RA 1..537 63..599 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:49:35 Download gff for IP07257.complete
Subject Subject Range Query Range Percent Splice Strand
CG5267-RA 1..723 1..723 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:21:00 Download gff for IP07257.complete
Subject Subject Range Query Range Percent Splice Strand
CG5267-RA 1..723 1..723 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:52:40 Download gff for IP07257.complete
Subject Subject Range Query Range Percent Splice Strand
CG5267-RA 1..723 1..723 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 15:39:07 Download gff for IP07257.complete
Subject Subject Range Query Range Percent Splice Strand
CG5267-RA 1..723 1..723 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:54:58 Download gff for IP07257.complete
Subject Subject Range Query Range Percent Splice Strand
CG5267-RA 1..723 1..723 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:13:17 Download gff for IP07257.complete
Subject Subject Range Query Range Percent Splice Strand
2R 16755101..16755823 1..723 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:13:17 Download gff for IP07257.complete
Subject Subject Range Query Range Percent Splice Strand
2R 16755101..16755823 1..723 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:13:17 Download gff for IP07257.complete
Subject Subject Range Query Range Percent Splice Strand
2R 16755101..16755823 1..723 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:52:40 Download gff for IP07257.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 12642606..12643328 1..723 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:49:52 Download gff for IP07257.complete
Subject Subject Range Query Range Percent Splice Strand
2R 16756300..16757022 1..723 100   Plus

IP07257.hyp Sequence

Translation from 2 to 598

> IP07257.hyp
WPKVYFVVQLIGILFQKHVLMAEDSAEDQITWPDDIAEPTLESELTWPNE
LPVTVTNGMTFRTARTLDHFDALRDDDEFMENPHKKVFDEFDSLEHRYHI
VHPIGEEIALKRNPLPEEKYIKQPFKFGCCHNSTYVGCAGVCPETCEYRS
KYCVPLCGPPCRCKRGYVYNIPHSACTLRSDCPKGIVQSKNGIYRVFL*

IP07257.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 10:16:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG5267-PA 178 CG5267-PA 1..178 21..198 1003 100 Plus
CG34189-PA 122 CG34189-PA 43..121 119..197 193 48.1 Plus
Acp62F-PA 115 CG1262-PA 31..97 126..191 181 50.7 Plus
CG33259-PA 119 CG33259-PA 24..88 126..189 172 50.8 Plus

IP07257.pep Sequence

Translation from 62 to 598

> IP07257.pep
MAEDSAEDQITWPDDIAEPTLESELTWPNELPVTVTNGMTFRTARTLDHF
DALRDDDEFMENPHKKVFDEFDSLEHRYHIVHPIGEEIALKRNPLPEEKY
IKQPFKFGCCHNSTYVGCAGVCPETCEYRSKYCVPLCGPPCRCKRGYVYN
IPHSACTLRSDCPKGIVQSKNGIYRVFL*

IP07257.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 00:51:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF11405-PA 213 GF11405-PA 24..213 2..178 414 50 Plus
Dana\GF19794-PA 128 GF19794-PA 34..90 112..168 144 47.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 00:51:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG20624-PA 200 GG20624-PA 24..200 2..178 767 79.1 Plus
Dere\GG14885-PA 131 GG14885-PA 26..88 106..167 141 50.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 00:51:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH23083-PA 113 GH23083-PA 9..112 78..177 183 44.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:43:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG5267-PB 201 CG5267-PB 24..201 1..178 1003 100 Plus
CG34189-PA 122 CG34189-PA 43..121 99..177 193 48.1 Plus
Acp62F-PA 115 CG1262-PA 31..97 106..171 181 50.7 Plus
CG33259-PA 119 CG33259-PA 24..88 106..169 172 50.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 00:51:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL11796-PA 98 GL11796-PA 17..97 97..177 181 48.1 Plus
Dper\Acp62F-PA 135 GL11209-PA 25..91 102..169 135 44.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 00:51:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA18773-PB 96 GA18773-PB 15..95 97..177 181 48.1 Plus
Dpse\Acp62F-PA 135 GA24640-PA 25..91 102..169 137 44.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 00:51:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM21718-PA 200 GM21718-PA 23..200 1..178 907 93.8 Plus
Dsec\Acp62F-PA 117 GM14509-PA 34..102 109..176 149 49.3 Plus
Dsec\GM25525-PA 117 GM25525-PA 24..88 106..169 142 46.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 00:51:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\Acp62F-PA 117 GD13705-PA 34..102 109..176 145 47.8 Plus
Dsim\GD14540-PA 118 GD14540-PA 24..88 106..169 143 47.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 00:51:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ20998-PA 107 GJ20998-PA 26..106 97..177 184 46.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 00:51:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK19009-PA 106 GK19009-PA 17..106 89..178 402 77.8 Plus
Dwil\GK18908-PA 97 GK18908-PA 21..81 109..168 140 47.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 00:51:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE11814-PA 198 GE11814-PA 22..198 2..178 775 81.4 Plus
Dyak\GE20336-PA 118 GE20336-PA 23..98 103..177 156 44.7 Plus