Clone IP07274 Report

Search the DGRC for IP07274

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:72
Well:74
Vector:pOT2
Associated Gene/TranscriptCG9101-RA
Protein status:IP07274.pep: gold
Preliminary Size:597
Sequenced Size:1060

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG9101 2005-01-01 Successful iPCR screen
CG9101 2008-04-29 Release 5.5 accounting
CG9101 2008-08-15 Release 5.9 accounting
CG9101 2008-12-18 5.12 accounting

Clone Sequence Records

IP07274.complete Sequence

1060 bp (1060 high quality bases) assembled on 2006-01-20

GenBank Submission: BT024368

> IP07274.complete
CTTTCCCCCATCAGTTAGTTTAGCAACTCAAAATCTCTAGCTATGAAAAT
TGTATCTGTTTGACAAAAAACAAAGAACTAAAAACACCAACATAAGTACA
CCAGTTCACAGGTTTAACCCAGACCCAACCACAAAAGTACACACAGAGCG
AATCTAGCTGGGATTATCCGAGCACACACTCCAAATGGGCGCCCAGTTGG
CCGGCGAAACGCGTGCCGAGGGTGGCGGTGCAGGACCAGGAACAGGACCA
CACCCACCGCAAAAGCAGGATTCGACGACCAAGAGGTCGGAAAAATCGGA
CCAGACGGAGAAAGCGTTGCCGGGGCAGACGAAGCAGGAACCGGATGGAC
AACCGATTCCCAAACAGGAGTATCCACAGCCGATGCCCGTTTCCAGACGC
CTCATAAGATCGCGCAGCTTCACCACCGATATCCAACGAATGCCAACGGA
GGCCATTTACGCGGAATTCGATCGACTGATTCAGCAGGTGGAGGGCCATC
TGGGGCCGGTGGCGGTGGAGTCACCGTGCTTGGATGTGGCCGCCCGGCTG
CAGAGCTGCCTCCAGGCGCACCGCCAGCGGTCGTGCAACTGCTTTGCAGC
TATGGAGGAGTACCGCAACTGCGTGGTGCGTGCCACACAGAATCGCGTGG
ACGACTTGGCGGACATGGAGCCGCCAATGATGCCGGTGGTGCCGCCCCAG
GTGATGCCACCTCCCGCTGTGCCGCCGCCAAATGCGCGTGGCAACCGCAG
GTGGTGGAAGTTTTGGACCTGGTTCCGCTAACCGGATGCAGTTGTCCGTT
TATCCGCCCAAAAACACGATGCTAGAGAAACGGCTTTATTAATTTAAATC
ATAGGACTTGAATCCATTTTCGTAGTTTTCCCGGCTGCAGATGTGACCAA
AAAGGATGTCTACTTCAAGTGAATTTAGTCACAGTGAATGCTCGGAAATT
AAACGCGGCAGCGTTTAGTTCAAATTGATAAATTGAAGCCAAGTAGATAA
ATAATTTGTATGTTCTGTGTAAAATAAATATTTAAACTTCAAAAAAAAAA
AAAAAAAAAA

IP07274.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:21:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG9101-RA 1091 CG9101-RA 45..1086 1..1042 5210 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 17:37:57
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 15118871..15119469 1040..442 2980 99.8 Minus
chrX 22417052 chrX 15119561..15120002 442..1 2210 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:51:40 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 17:37:55
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 15228742..15229342 1042..442 3005 100 Minus
X 23542271 X 15229434..15229875 442..1 2210 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:13:41
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 15236840..15237440 1042..442 3005 100 Minus
X 23527363 X 15237532..15237973 442..1 2210 100 Minus
Blast to na_te.dros performed on 2019-03-16 17:37:55 has no hits.

IP07274.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 17:39:08 Download gff for IP07274.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 15118871..15119469 442..1040 99 <- Minus
chrX 15119562..15120002 1..441 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:32:09 Download gff for IP07274.complete
Subject Subject Range Query Range Percent Splice Strand
CG9101-RA 1..597 185..781 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:37:18 Download gff for IP07274.complete
Subject Subject Range Query Range Percent Splice Strand
CG9101-RA 1..597 185..781 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 16:58:40 Download gff for IP07274.complete
Subject Subject Range Query Range Percent Splice Strand
CG9101-RA 1..597 185..781 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:12:13 Download gff for IP07274.complete
Subject Subject Range Query Range Percent Splice Strand
CG9101-RA 1..597 185..781 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:03:04 Download gff for IP07274.complete
Subject Subject Range Query Range Percent Splice Strand
CG9101-RA 1..597 185..781 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:09:03 Download gff for IP07274.complete
Subject Subject Range Query Range Percent Splice Strand
CG9101-RA 1..1040 1..1040 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:37:18 Download gff for IP07274.complete
Subject Subject Range Query Range Percent Splice Strand
CG9101-RA 1..1040 1..1040 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:58:40 Download gff for IP07274.complete
Subject Subject Range Query Range Percent Splice Strand
CG9101-RA 1..1040 1..1040 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:12:13 Download gff for IP07274.complete
Subject Subject Range Query Range Percent Splice Strand
CG9101-RA 1..1040 1..1040 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:03:04 Download gff for IP07274.complete
Subject Subject Range Query Range Percent Splice Strand
CG9101-RA 1..1040 1..1040 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:39:08 Download gff for IP07274.complete
Subject Subject Range Query Range Percent Splice Strand
X 15228744..15229342 442..1040 100 <- Minus
X 15229435..15229875 1..441 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:39:08 Download gff for IP07274.complete
Subject Subject Range Query Range Percent Splice Strand
X 15228744..15229342 442..1040 100 <- Minus
X 15229435..15229875 1..441 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:39:08 Download gff for IP07274.complete
Subject Subject Range Query Range Percent Splice Strand
X 15228744..15229342 442..1040 100 <- Minus
X 15229435..15229875 1..441 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:58:40 Download gff for IP07274.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 15122777..15123375 442..1040 100 <- Minus
arm_X 15123468..15123908 1..441 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:00:32 Download gff for IP07274.complete
Subject Subject Range Query Range Percent Splice Strand
X 15236842..15237440 442..1040 100 <- Minus
X 15237533..15237973 1..441 100   Minus

IP07274.pep Sequence

Translation from 184 to 780

> IP07274.pep
MGAQLAGETRAEGGGAGPGTGPHPPQKQDSTTKRSEKSDQTEKALPGQTK
QEPDGQPIPKQEYPQPMPVSRRLIRSRSFTTDIQRMPTEAIYAEFDRLIQ
QVEGHLGPVAVESPCLDVAARLQSCLQAHRQRSCNCFAAMEEYRNCVVRA
TQNRVDDLADMEPPMMPVVPPQVMPPPAVPPPNARGNRRWWKFWTWFR*

IP07274.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 13:23:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF21049-PA 197 GF21049-PA 1..197 1..198 401 46.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 13:23:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG19414-PA 199 GG19414-PA 1..199 1..198 645 74.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 13:23:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH24306-PA 144 GH24306-PA 7..144 64..198 259 40.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:20:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG9101-PA 198 CG9101-PA 1..198 1..198 1079 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 13:23:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI21698-PA 177 GI21698-PA 36..177 78..198 239 39.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 13:23:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL15199-PA 173 GL15199-PA 40..173 66..198 410 56.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 13:23:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA21543-PA 173 GA21543-PA 40..173 66..198 406 55.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 13:23:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM16841-PA 198 GM16841-PA 1..198 1..198 842 88.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 13:23:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD15814-PA 198 GD15814-PA 1..198 1..198 816 89.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 13:23:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ15879-PA 159 GJ15879-PA 12..159 43..198 265 40.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 13:23:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK16412-PA 194 GK16412-PA 1..194 1..198 287 39.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 13:23:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE16061-PA 237 GE16061-PA 1..237 1..198 708 67.8 Plus

IP07274.hyp Sequence

Translation from 184 to 780

> IP07274.hyp
MGAQLAGETRAEGGGAGPGTGPHPPQKQDSTTKRSEKSDQTEKALPGQTK
QEPDGQPIPKQEYPQPMPVSRRLIRSRSFTTDIQRMPTEAIYAEFDRLIQ
QVEGHLGPVAVESPCLDVAARLQSCLQAHRQRSCNCFAAMEEYRNCVVRA
TQNRVDDLADMEPPMMPVVPPQVMPPPAVPPPNARGNRRWWKFWTWFR*

IP07274.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 10:17:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG9101-PA 198 CG9101-PA 1..198 1..198 1079 100 Plus