BDGP Sequence Production Resources |
Search the DGRC for IP07275
Library: | IP |
Tissue Source: | Pooled D melanogaster cDNA libraries |
Created by: | |
Date Registered: | 2004-07-08 |
Comments: | |
Original Plate Number: | 72 |
Well: | 75 |
Vector: | pOT2 |
Associated Gene/Transcript | Psf1-RA |
Protein status: | IP07275.pep: gold |
Preliminary Size: | 609 |
Sequenced Size: | 711 |
Gene | Date | Evidence |
---|---|---|
CG9187 | 2005-01-01 | Successful iPCR screen |
Psf1 | 2008-04-29 | Release 5.5 accounting |
Psf1 | 2008-08-15 | Release 5.9 accounting |
Psf1 | 2008-12-18 | 5.12 accounting |
711 bp (711 high quality bases) assembled on 2006-03-22
GenBank Submission: BT025002
> IP07275.complete ACAATGAGCCGACAAACAAAAATGTTCGGGGAGAAAGCCTTCGACCTGCT TAAAGAACTGGAGAGATCGTCTCAGACAATTCCCGCCTTCGACGACGATG GGGTGCGCCAGGTGCTGGAGGAGATCAAGGCGATATTCGAGGAGAACGTG GCCCAGGCCTCCAGCTACAATGCTTCCGGGGATCGCAGTCTGTGGCCCCT GCTCAACTTCAGGCACGCAGCTCTCCAGAGGAACAAGCGGTGCCTGCTGG CCTACCTATACGAGCGGTGCAGGAGGATCAAGGCCCTCAGGTGGGAGTTT GGACCCATTATCCCCGGGGACATCAAGCAGGCACTCTGCGAACCGGAGGT CACCTTCTTCAACAACTACTCCAAGTCCCTGGCTGCCTACATGTGCAGTG CGGGCTACAACCAGGGCTTGCCCATTGATCTAACCAACAATCTGCGTCCG CCCAAGTCACTTTACATCGAGGTGCGCTGCATGGAGGACTATGGGAAGTT CGAGCTGGACGACGGCGAGGTGATCCACCTGAAGAAGAACAGCCAGCACT ATCTGCCCCGAGCTCAGGTGGAGTCTCTCGTGAGGCAGGGCATTCTTCAC CACATAGCCTAGTCGGGATTATTTGATAATAAGAGTTTACTATACATATT TAATGGTTTAATGTAGAACAAATAAAAGATAAAAAATTATTTAAAAAAAA AAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
gypsy11 | 4428 | gypsy11 GYPSY11 4428bp | 3445..3514 | 622..691 | 116 | 62.9 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 1246524..1247192 | 1..669 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Psf1-RA | 1..609 | 4..612 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Psf1-RA | 1..609 | 4..612 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Psf1-RA | 1..609 | 4..612 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Psf1-RA | 1..609 | 4..612 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Psf1-RA | 1..609 | 4..612 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Psf1-RA | 1..609 | 4..612 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Psf1-RA | 474..1165 | 1..692 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Psf1-RA | 1..692 | 1..692 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Psf1-RA | 1..609 | 4..612 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Psf1-RA | 1..692 | 1..692 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1246986..1247677 | 1..692 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1246986..1247677 | 1..692 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1246986..1247677 | 1..692 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 1246986..1247677 | 1..692 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1246986..1247677 | 1..692 | 99 | Minus |
Translation from 0 to 611
> IP07275.hyp TMSRQTKMFGEKAFDLLKELERSSQTIPAFDDDGVRQVLEEIKAIFEENV AQASSYNASGDRSLWPLLNFRHAALQRNKRCLLAYLYERCRRIKALRWEF GPIIPGDIKQALCEPEVTFFNNYSKSLAAYMCSAGYNQGLPIDLTNNLRP PKSLYIEVRCMEDYGKFELDDGEVIHLKKNSQHYLPRAQVESLVRQGILH HIA*
Translation from 3 to 611
> IP07275.pep MSRQTKMFGEKAFDLLKELERSSQTIPAFDDDGVRQVLEEIKAIFEENVA QASSYNASGDRSLWPLLNFRHAALQRNKRCLLAYLYERCRRIKALRWEFG PIIPGDIKQALCEPEVTFFNNYSKSLAAYMCSAGYNQGLPIDLTNNLRPP KSLYIEVRCMEDYGKFELDDGEVIHLKKNSQHYLPRAQVESLVRQGILHH IA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF25042-PA | 204 | GF25042-PA | 1..204 | 1..202 | 997 | 91.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14612-PA | 202 | GG14612-PA | 1..202 | 1..202 | 1066 | 97.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15736-PA | 200 | GH15736-PA | 1..200 | 1..202 | 905 | 85.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Psf1-PA | 202 | CG9187-PA | 1..202 | 1..202 | 1060 | 100 | Plus |
CG32318-PA | 164 | CG32318-PA | 107..164 | 145..202 | 308 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12793-PA | 200 | GI12793-PA | 1..200 | 1..202 | 912 | 84.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16122-PA | 202 | GL16122-PA | 1..202 | 1..202 | 991 | 91.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA28390-PA | 202 | GA28390-PA | 1..202 | 1..202 | 991 | 91.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14226-PA | 196 | GM14226-PA | 1..196 | 7..202 | 1049 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13488-PA | 196 | GD13488-PA | 1..196 | 7..202 | 1054 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16092-PA | 200 | GJ16092-PA | 1..200 | 1..202 | 926 | 85.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16541-PA | 191 | GK16541-PA | 1..191 | 7..202 | 876 | 85.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE20973-PA | 196 | GE20973-PA | 1..196 | 7..202 | 1049 | 99 | Plus |