Clone IP07317 Report

Search the DGRC for IP07317

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:73
Well:17
Vector:pOT2
Associated Gene/TranscriptCG31957-RA
Protein status:IP07317.pep: gold
Preliminary Size:571
Sequenced Size:693

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG31957 2005-01-01 Successful iPCR screen
CG31957 2008-04-29 Release 5.5 accounting
CG31957 2008-08-15 Release 5.9 accounting
CG31957 2008-12-18 5.12 accounting

Clone Sequence Records

IP07317.complete Sequence

693 bp (693 high quality bases) assembled on 2006-06-07

GenBank Submission: BT025911

> IP07317.complete
TGACACGACTTGTGCTGCCTCACATCACTAGCCCAACAGCTGTTTGTACA
CAAAACAAGTCAAAAGTTGAGCAATTTTAATTTAATTGGCAATTTGCACA
GAAATCATATTGAAAGCTGCACAATGCACCGATCACACCCGAGTATCAGT
CGTCGCAAGCATCTCATGAAGGAGATGATGGAGGACGACTACGCGCTGCC
CACAGAAACTCAGCAGATTGCGCGGGTCATCAGCAGTCGGGGCAACAATC
TCCACGAGGTGGAGACCGTGGACGAAACGTTCCTTGTTTCGATGCCCAAC
AAATTCCGCAAGAGCATGTGGGTGAAACGTGGCGACTTTCTGCTGGTCGA
ACCGATTGAGGAGGGCGATAAAGTCAAAGCCGAGATTTGCAAAATACTCA
CACCCGAACATATAAAGGAATACACAAAAGCTGCAATTTGGCCGGATAAA
TTCACAAAGAAACCTGTACAGGAGGAAGCCACCAGCCAAAACAAAGACGA
CTCCGATTTCGAGGATGATCTCCTGCCCAATACAAATCGGCCTGTAAATC
GCGATTCCTCCGACGAAGAGGAAGATGAGGAAACATCCAGCGAAGAGGAC
TGAACGATGTACAAACACACACATAGTTAGGTTATTTACAAATTTGTCAA
ACTTAATTAAAAAAAAACTGTTGGTTAAAAAAAAAAAAAAAAA

IP07317.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:13:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG31957-RA 977 CG31957-RA 78..755 1..678 3390 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 19:25:12
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 3870995..3871385 676..286 1955 100 Minus
chr2L 23010047 chr2L 3871688..3871973 286..1 1430 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:51:43 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 19:25:10
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 3871478..3871870 678..286 1965 100 Minus
2L 23513712 2L 3872173..3872458 286..1 1430 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:07:37
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 3871478..3871870 678..286 1965 100 Minus
2L 23513712 2L 3872173..3872458 286..1 1430 100 Minus
Blast to na_te.dros performed on 2019-03-15 19:25:10 has no hits.

IP07317.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 19:25:50 Download gff for IP07317.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 3870995..3871384 287..676 100 <- Minus
chr2L 3871688..3871973 1..286 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:32:12 Download gff for IP07317.complete
Subject Subject Range Query Range Percent Splice Strand
CG31957-RA 1..480 124..603 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:22:40 Download gff for IP07317.complete
Subject Subject Range Query Range Percent Splice Strand
CG31957-RA 1..480 124..603 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:51:07 Download gff for IP07317.complete
Subject Subject Range Query Range Percent Splice Strand
CG31957-RA 1..480 124..603 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 15:41:23 Download gff for IP07317.complete
Subject Subject Range Query Range Percent Splice Strand
CG31957-RA 1..480 124..603 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:18:02 Download gff for IP07317.complete
Subject Subject Range Query Range Percent Splice Strand
CG31957-RA 1..480 124..603 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:51:03 Download gff for IP07317.complete
Subject Subject Range Query Range Percent Splice Strand
CG31957-RA 1..676 1..676 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:22:40 Download gff for IP07317.complete
Subject Subject Range Query Range Percent Splice Strand
CG31957-RA 1..676 1..676 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:51:07 Download gff for IP07317.complete
Subject Subject Range Query Range Percent Splice Strand
CG31957-RA 1..676 1..676 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 15:41:24 Download gff for IP07317.complete
Subject Subject Range Query Range Percent Splice Strand
CG31957-RA 1..676 1..676 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:18:02 Download gff for IP07317.complete
Subject Subject Range Query Range Percent Splice Strand
CG31957-RA 1..676 1..676 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:25:50 Download gff for IP07317.complete
Subject Subject Range Query Range Percent Splice Strand
2L 3871480..3871869 287..676 100 <- Minus
2L 3872173..3872458 1..286 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:25:50 Download gff for IP07317.complete
Subject Subject Range Query Range Percent Splice Strand
2L 3871480..3871869 287..676 100 <- Minus
2L 3872173..3872458 1..286 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:25:50 Download gff for IP07317.complete
Subject Subject Range Query Range Percent Splice Strand
2L 3871480..3871869 287..676 100 <- Minus
2L 3872173..3872458 1..286 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:51:07 Download gff for IP07317.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 3872173..3872458 1..286 100   Minus
arm_2L 3871480..3871869 287..676 100 <- Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:50:59 Download gff for IP07317.complete
Subject Subject Range Query Range Percent Splice Strand
2L 3871480..3871869 287..676 100 <- Minus
2L 3872173..3872458 1..286 100   Minus

IP07317.pep Sequence

Translation from 123 to 602

> IP07317.pep
MHRSHPSISRRKHLMKEMMEDDYALPTETQQIARVISSRGNNLHEVETVD
ETFLVSMPNKFRKSMWVKRGDFLLVEPIEEGDKVKAEICKILTPEHIKEY
TKAAIWPDKFTKKPVQEEATSQNKDDSDFEDDLLPNTNRPVNRDSSDEEE
DEETSSEED*

IP07317.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 01:17:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24643-PA 162 GF24643-PA 1..162 1..159 679 79.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 01:17:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24398-PA 160 GG24398-PA 1..143 1..143 729 94.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 01:17:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH10238-PA 158 GH10238-PA 2..141 4..142 519 69.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:14:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG31957-PB 159 CG31957-PB 1..159 1..159 833 100 Plus
CG31957-PA 159 CG31957-PA 1..159 1..159 833 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 01:17:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15299-PA 162 GI15299-PA 2..143 4..142 537 70.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 01:17:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL19303-PA 163 GL19303-PA 1..144 1..141 527 74.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 01:17:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA16587-PA 163 GA16587-PA 1..144 1..141 532 75 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 01:17:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18117-PA 160 GM18117-PA 1..160 1..159 812 96.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 01:17:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22725-PA 159 GD22725-PA 1..159 1..159 824 97.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 01:17:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ17268-PA 165 GJ17268-PA 2..147 4..142 528 67.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 01:17:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK23772-PA 158 GK23772-PA 1..136 1..139 529 72.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 01:17:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE14789-PA 159 GE14789-PA 1..143 1..143 740 95.8 Plus

IP07317.hyp Sequence

Translation from 123 to 602

> IP07317.hyp
MHRSHPSISRRKHLMKEMMEDDYALPTETQQIARVISSRGNNLHEVETVD
ETFLVSMPNKFRKSMWVKRGDFLLVEPIEEGDKVKAEICKILTPEHIKEY
TKAAIWPDKFTKKPVQEEATSQNKDDSDFEDDLLPNTNRPVNRDSSDEEE
DEETSSEED*

IP07317.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 10:17:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG31957-PB 159 CG31957-PB 1..159 1..159 833 100 Plus
CG31957-PA 159 CG31957-PA 1..159 1..159 833 100 Plus