Clone IP07508 Report

Search the DGRC for IP07508

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:75
Well:8
Vector:pOT2
Associated Gene/TranscriptCG31677-RA
Protein status:IP07508.pep: gold
Preliminary Size:608
Sequenced Size:679

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG31677 2005-01-01 Successful iPCR screen
CG31677 2008-04-29 Release 5.5 accounting
CG31677 2008-08-15 Release 5.9 accounting
CG31677 2008-12-18 5.12 accounting

Clone Sequence Records

IP07508.complete Sequence

679 bp (679 high quality bases) assembled on 2005-01-13

GenBank Submission: BT022885

> IP07508.complete
ATGCTAATACCTCAAAAAAGGAGTGCAACAGGGACTCGACTCTGTGGTGC
CTTGTGGCATTTCGAGAATGCAAATTAACGCTCGAGATGGGATTCAAATG
AATAAGGCTCCTGGCCAGAATAGAATATTGATGTTATCCCCAGCTAGACC
AGTTAGCTGCCGACGTTGTGTGGTTATCAATATGGCCAATATTCCAATCC
ACAGCACATCCGCACATCAGCTGAGATACAAAGAGCCACACTCGCATATT
GTATCTGCATTTATGAAAATGCAAACTACAAGTACGGGGTCGGGGAAAAC
GCCAGCTGAAACTATCAAAATGCATGCCAAGAGGCAAACAACAAAAGCAG
GCAACACGAGCTGCCGCAACATGGCAAACATGAAACCGAAACCGAAAACT
GTAACTAAAACTGCGGCCAAAATCACCGCCCATGCCACCCACTCGAATGC
TAACTTCAGGCAGCCAAAACGGGCAGCAAAAAAGCGAGAACGGGCGAAAT
TTGCATGCATATTTACAAACTTTCGTTCGGAAAAGTCAGAATAATGGCAG
TACAGTTGCGAAAGAGAACGGCCTTTAATTTTTTTTGAAATTTTAAAGCG
ATCCTAACGAGACGTATCGTACATCTGTAAATTAAAAAAAAAAAAAAAAC
AAAAAAAAAAAAAAAAAAAAAAAAAAAAA

IP07508.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:39:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG31677-RA 608 CG31677-RA 30..608 1..579 2895 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 01:31:58
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 20601939..20602587 649..1 3215 99.7 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:52:16 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 01:31:56
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 20603514..20604167 654..1 3270 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:29:54
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 20603514..20604167 654..1 3270 100 Minus
Blast to na_te.dros performed on 2019-03-16 01:31:56 has no hits.

IP07508.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 01:32:59 Download gff for IP07508.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 20601961..20602587 1..627 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:32:38 Download gff for IP07508.complete
Subject Subject Range Query Range Percent Splice Strand
CG31677-RA 1..477 68..544 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:06:08 Download gff for IP07508.complete
Subject Subject Range Query Range Percent Splice Strand
CG31677-RA 1..477 68..544 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:07:30 Download gff for IP07508.complete
Subject Subject Range Query Range Percent Splice Strand
CG31677-RA 1..477 68..544 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:51:08 Download gff for IP07508.complete
Subject Subject Range Query Range Percent Splice Strand
CG31677-RA 1..477 68..544 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 04:35:45 Download gff for IP07508.complete
Subject Subject Range Query Range Percent Splice Strand
CG31677-RA 1..477 68..544 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:54:52 Download gff for IP07508.complete
Subject Subject Range Query Range Percent Splice Strand
CG31677-RA 30..608 1..579 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:06:08 Download gff for IP07508.complete
Subject Subject Range Query Range Percent Splice Strand
CG31677-RA 30..608 1..579 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:07:30 Download gff for IP07508.complete
Subject Subject Range Query Range Percent Splice Strand
CG31677-RA 30..662 1..633 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:51:08 Download gff for IP07508.complete
Subject Subject Range Query Range Percent Splice Strand
CG31677-RA 30..608 1..579 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 04:35:45 Download gff for IP07508.complete
Subject Subject Range Query Range Percent Splice Strand
CG31677-RA 30..662 1..633 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:32:59 Download gff for IP07508.complete
Subject Subject Range Query Range Percent Splice Strand
2L 20603535..20604167 1..633 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:32:59 Download gff for IP07508.complete
Subject Subject Range Query Range Percent Splice Strand
2L 20603535..20604167 1..633 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:32:59 Download gff for IP07508.complete
Subject Subject Range Query Range Percent Splice Strand
2L 20603535..20604167 1..633 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:07:30 Download gff for IP07508.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 20603535..20604167 1..633 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:25:56 Download gff for IP07508.complete
Subject Subject Range Query Range Percent Splice Strand
2L 20603535..20604167 1..633 100   Minus

IP07508.hyp Sequence

Translation from 67 to 543

> IP07508.hyp
MQINARDGIQMNKAPGQNRILMLSPARPVSCRRCVVINMANIPIHSTSAH
QLRYKEPHSHIVSAFMKMQTTSTGSGKTPAETIKMHAKRQTTKAGNTSCR
NMANMKPKPKTVTKTAAKITAHATHSNANFRQPKRAAKKRERAKFACIFT
NFRSEKSE*

IP07508.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 11:29:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG31677-PA 158 CG31677-PA 1..158 1..158 820 100 Plus

IP07508.pep Sequence

Translation from 67 to 543

> IP07508.pep
MQINARDGIQMNKAPGQNRILMLSPARPVSCRRCVVINMANIPIHSTSAH
QLRYKEPHSHIVSAFMKMQTTSTGSGKTPAETIKMHAKRQTTKAGNTSCR
NMANMKPKPKTVTKTAAKITAHATHSNANFRQPKRAAKKRERAKFACIFT
NFRSEKSE*

IP07508.pep Blast Records

Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 18:36:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG16554-PA 54 GG16554-PA 1..50 1..50 232 86 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:25:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG31677-PA 158 CG31677-PA 1..158 1..158 820 100 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 18:36:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM19557-PA 80 GM19557-PA 1..77 1..77 401 96.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 18:36:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD17799-PA 80 GD17799-PA 1..77 1..77 407 97.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 18:36:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE18093-PA 52 GE18093-PA 1..48 1..50 131 60 Plus