Clone IP07509 Report

Search the DGRC for IP07509

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:75
Well:9
Vector:pOT2
Associated Gene/TranscriptCG31686-RA
Protein status:IP07509.pep: wuzgold
Preliminary Size:585
Sequenced Size:2263

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG31686 2005-01-01 Successful iPCR screen
CG31686-RA 2009-01-21 est gleaning

Clone Sequence Records

IP07509.complete Sequence

2263 bp assembled on 2009-12-11

GenBank Submission: BT120020.1

> IP07509.complete
CACGCACCAGTCGACCGGTCAGATCTGCGGCTTATTCCGCCGGCGTTCGA
AATTTATAACGGTGGAGATCGGTCATCGGACGCACTACACTCGATCGGTC
AGAAGCCCCGAGGGAGATATCTTGGAACAGCCATGATCTCGCAGCTGGGA
CGGATTAGCATCATGAGTGCGGTGCTTTTGGCATTTGCGGCCATCGTATT
TGCCAGCAGCTCGGAGAAAACCGAACTCGATCCCAATGCCACCTGCAACT
ACACGCTGGTGAAGAAGAAGACCTTGGGGGTGGATCCCTCGTTCTGGAAG
AAGTTCTTCAAGCACCTCATACCCTTCACGAGTTCGAGGGGCAAAATGCA
GTTCATACTCTTCAAGCGGGACTTCGCGGACTGCGGAAGGGAACTGTTCG
TGGGCGATGTGGAAAACCTGAGGAACTCGGGCTTCGATGCACGTCATCAA
ACAAGGATAGTCATTCATGGCTGGATGAGTCAGAGCAAAGGTTCGCATAT
AAGGAAGGTTAAGAACGCATACCTCAGCCTGACCGATCCGGGACCCAACG
GAGAGCCCGCCCCCTACGAGGACTTCAATGTGATCGTATGTGACTGGAGC
AAGACTTCCACGAACGTAAACTACTACGAGGTGGCCAAGACGGTGGAGGA
CATGGGAGCCCTGCTGGCGGAACTGGTGCGCTATCTGAACCAGGAGGCGA
ACATGCACTACGACGACGTATACGTCATTGGACACTCTCTGGGAGCGCAG
ATCGCCGGCAGTGCTGGCAAGCAGATAATGCCATATCGATTCAACACCAT
ATACGCTCTGGATCCGGCGGGTCCACAGTTCCGGGAGAAGAGCGACGAGT
ACCGAATCGATGCTAGTGACGCCTCCTATGTGGAGTCCATTCAAACCAGC
GTTAGCTTTGGCTTCGAGCAGCCCGTGGGACACGCCACCTTCTATCCCAA
CTATGGGAAGAATCAGAAGAAATGCTATGTCTATGGCTGTTCTCATAAGA
GATCCCATGACTACTTCATAGAGTCGCTGACGAGTCCGGCGGGATTTTGG
GGACCGCGCTGCGAGCGTCACGATGATGGCACCTGGCTGCTCCTAATGAG
CGATGGAGAGTTCCGGATGGGCGGGGAGCCCTCAATCCCCAAGAACGGAA
CTTTCTATGTGAAAACCTACTCAAAGCCACCCTATGCCATGGGCCACAGG
TGGCAAACGGAACCGCCTCCACGGGAAGATGATATTGAGAACTCCACGGA
AGAGTAGGATATTAGTTAATATGTGTACATTTGTTGATGAAATAGAAGTT
TGGTATTTATAATTGGTTATTTTTCTTTTATAGAGAATTTATTATAAATA
GTACACCTATTTCTAGAAACATTTTTTTAAGTTACTTCTTATCTCGCAAC
AACGTGAGCCAATTAAGTTTTATGGCGAACTATTCACAAAGAAAAACCAT
CTAGCGAGTGTGTAAGTCAGCTGGGAATAACTATTAGTAACCTAAACTTC
AAGATAGGTATATAAACCTCACGAGGCACGGAAGGCTTATCCACTCTTTC
CACAATATTCAACCGAAAATGTTCCGCGCTCAACGTGTTTGCTTTTACTT
TATAGCTTTCCTGGCCTTCGCAGCTGCCAGACCTAAAATAAACTCGCAAA
TTTCCCAAAATCAAGTTGGATTTCGATTGTCCAATGTTTTGACCAAAGAA
AGTGTTGCTTCCAAGTCATCAATGTCCACAGAGGCAACCAGTGAACCATC
CACTGTGACTTCTGACGTGCCCACACTAACTTCACCATCATCATCATCAT
CTGAGGAAACTAGTGAAGCACCTGAAAGTTCCAGCCAGCAACTATCACCA
TTGACTGAAAGCTCCAGCGAAAAGGTATTTGAGGTGACCACAGTACCTTC
ATCTTCGTCGGCGGAAACTAGTGAAGCATCTGAGACTTCTAAGGCATTCA
CCGAAACAACCACCACCACGGAAAGTGACGTGACATCTGAAGATTCCACC
GAAGATGAGTCATCTGAAGATTCCACCGAAGATGAGTCATCTGAAGATTC
CTCCGAAGATGAGAGCTCCGAATCAAGTGAGGAATCAGAGGAAGGATCGT
ACTACTATGATGATTCGGAATACGACTACTACGATAGTTACTTATATTAT
TGATTCATCGCGTTACCATTAAACTTTATGTCAGATCGGAATACAAATCT
TTTTGAAGAGGCTTGAAAATTTAGTAAAGTAAACAAAATGAAGCTGTCAA
AAAAAAAAAAAAA

IP07509.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:46:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG4267-RA 1626 CG4267-RA 230..1626 1..1397 6985 100 Plus
CG4267.a 1319 CG4267.a 13..1319 1..1311 6470 99.6 Plus
CG4267.b 1318 CG4267.b 13..1318 1..1311 6455 99.6 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 18:44:21
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 2243309..2245103 454..2248 8900 99.7 Plus
chr2L 23010047 chr2L 2242445..2242699 202..456 1245 99.2 Plus
chr2L 23010047 chr2L 2242143..2242344 1..202 965 98.5 Plus
chr2L 23010047 chr2L 2244839..2244891 2011..2063 250 98.1 Plus
chr2L 23010047 chr2L 2244866..2244918 1984..2036 250 98.1 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:52:17 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 18:44:19
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2243558..2245353 454..2249 8980 100 Plus
2L 23513712 2L 2242692..2242946 202..456 1275 100 Plus
2L 23513712 2L 2242390..2242591 1..202 1010 100 Plus
2L 23513712 2L 2245088..2245140 2011..2063 250 98.1 Plus
2L 23513712 2L 2245115..2245167 1984..2036 250 98.1 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:44:05
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2243558..2245353 454..2249 8980 100 Plus
2L 23513712 2L 2242692..2242946 202..456 1275 100 Plus
2L 23513712 2L 2242390..2242591 1..202 1010 100 Plus
Blast to na_te.dros performed on 2019-03-15 18:44:20 has no hits.

IP07509.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 18:45:28 Download gff for IP07509.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 2242143..2242344 1..202 98 -> Plus
chr2L 2242446..2242698 203..455 99 -> Plus
chr2L 2243311..2245103 456..2248 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-12-11 16:44:10 Download gff for IP07509.complete
Subject Subject Range Query Range Percent Splice Strand
CG4267-RA 1..1125 133..1257 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:27:39 Download gff for IP07509.complete
Subject Subject Range Query Range Percent Splice Strand
CG4267-RA 1..1125 133..1257 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:28:29 Download gff for IP07509.complete
Subject Subject Range Query Range Percent Splice Strand
CG4267-RA 1..1125 133..1257 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:58:03 Download gff for IP07509.complete
Subject Subject Range Query Range Percent Splice Strand
CG4267-RA 1..1125 133..1257 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-11 16:44:10 Download gff for IP07509.complete
Subject Subject Range Query Range Percent Splice Strand
CG4267-RA 13..1323 1..1311 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:27:39 Download gff for IP07509.complete
Subject Subject Range Query Range Percent Splice Strand
CG4267-RA 12..1322 1..1311 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:28:29 Download gff for IP07509.complete
Subject Subject Range Query Range Percent Splice Strand
CG4267-RB 13..2182 1..2170 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:58:03 Download gff for IP07509.complete
Subject Subject Range Query Range Percent Splice Strand
CG4267-RB 13..2182 1..2170 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:45:28 Download gff for IP07509.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2242390..2242591 1..202 100 -> Plus
2L 2242693..2242945 203..455 100 -> Plus
2L 2243560..2245352 456..2248 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:45:28 Download gff for IP07509.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2242390..2242591 1..202 100 -> Plus
2L 2242693..2242945 203..455 100 -> Plus
2L 2243560..2245352 456..2248 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:45:28 Download gff for IP07509.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2242390..2242591 1..202 100 -> Plus
2L 2242693..2242945 203..455 100 -> Plus
2L 2243560..2245352 456..2248 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:28:29 Download gff for IP07509.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 2242390..2242591 1..202 100 -> Plus
arm_2L 2242693..2242945 203..455 100 -> Plus
arm_2L 2243560..2245352 456..2248 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:13:50 Download gff for IP07509.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2242693..2242945 203..455 100 -> Plus
2L 2243560..2245352 456..2248 100   Plus
2L 2242390..2242591 1..202 100 -> Plus

IP07509.hyp Sequence

Translation from 0 to 1256

> IP07509.hyp
HAPVDRSDLRLIPPAFEIYNGGDRSSDALHSIGQKPRGRYLGTAMISQLG
RISIMSAVLLAFAAIVFASSSEKTELDPNATCNYTLVKKKTLGVDPSFWK
KFFKHLIPFTSSRGKMQFILFKRDFADCGRELFVGDVENLRNSGFDARHQ
TRIVIHGWMSQSKGSHIRKVKNAYLSLTDPGPNGEPAPYEDFNVIVCDWS
KTSTNVNYYEVAKTVEDMGALLAELVRYLNQEANMHYDDVYVIGHSLGAQ
IAGSAGKQIMPYRFNTIYALDPAGPQFREKSDEYRIDASDASYVESIQTS
VSFGFEQPVGHATFYPNYGKNQKKCYVYGCSHKRSHDYFIESLTSPAGFW
GPRCERHDDGTWLLLMSDGEFRMGGEPSIPKNGTFYVKTYSKPPYAMGHR
WQTEPPPREDDIENSTEE*

IP07509.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:53:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG4267-PB 374 CG4267-PB 1..374 45..418 2014 100 Plus
CG4267-PA 374 CG4267-PA 1..374 45..418 2014 100 Plus
CG6675-PC 386 CG6675-PC 77..384 81..398 821 51.7 Plus
CG6675-PB 390 CG6675-PB 81..388 81..398 821 51.7 Plus
sxe2-PB 387 CG4979-PB 90..360 135..395 414 33.2 Plus

IP07509.pep Sequence

Translation from 1568 to 2152

> IP07509.pep
MFRAQRVCFYFIAFLAFAAARPKINSQISQNQVGFRLSNVLTKESVASKS
SMSTEATSEPSTVTSDVPTLTSPSSSSSEETSEAPESSSQQLSPLTESSS
EKVFEVTTVPSSSSAETSEASETSKAFTETTTTTESDVTSEDSTEDESSE
DSTEDESSEDSSEDESSESSEESEEGSYYYDDSEYDYYDSYLYY*

IP07509.pep Blast Records

Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 18:31:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24842-PA 127 GG24842-PA 1..87 1..91 234 64.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:37:32
Subject Length Description Subject Range Query Range Score Percent Strand
Ppn-PC 2174 CG33103-PC 780..942 38..186 187 36.8 Plus
Ppn-PF 2776 CG33103-PF 780..942 38..186 187 36.8 Plus
Ppn-PG 2841 CG33103-PG 780..942 38..186 187 36.8 Plus
Ppn-PE 2898 CG33103-PE 780..942 38..186 187 36.8 Plus
Muc68D-PB 1514 CG6004-PB 303..448 42..176 180 37.6 Plus
Muc68D-PB 1514 CG6004-PB 306..482 25..176 180 32.8 Plus
Muc68D-PB 1514 CG6004-PB 473..617 42..176 180 36 Plus
Muc68D-PB 1514 CG6004-PB 688..830 42..177 180 37.1 Plus
Muc68D-PB 1514 CG6004-PB 442..604 25..184 178 31.7 Plus
Muc68D-PB 1514 CG6004-PB 832..964 42..177 177 35.8 Plus
Muc68D-PB 1514 CG6004-PB 408..564 25..177 176 32.5 Plus
Muc68D-PB 1514 CG6004-PB 510..665 25..177 176 34.2 Plus
Muc68D-PB 1514 CG6004-PB 721..870 42..184 176 34.7 Plus
Muc68D-PB 1514 CG6004-PB 736..883 42..176 176 33.8 Plus
Muc68D-PB 1514 CG6004-PB 374..537 25..184 173 31.1 Plus
Muc68D-PB 1514 CG6004-PB 637..764 42..177 173 35.5 Plus
Muc68D-PB 1514 CG6004-PB 917..1071 38..184 173 33.5 Plus
Muc68D-PB 1514 CG6004-PB 659..797 42..177 172 33.6 Plus
Muc68D-PB 1514 CG6004-PB 577..731 38..177 171 34.4 Plus
Muc68D-PB 1514 CG6004-PB 843..1004 38..184 171 35.4 Plus
Muc68D-PB 1514 CG6004-PB 566..698 42..177 170 34.3 Plus
Muc68D-PB 1514 CG6004-PB 507..640 42..177 169 37.6 Plus
Muc68D-PB 1514 CG6004-PB 791..940 42..177 168 33.3 Plus
Muc68D-PB 1514 CG6004-PB 903..1031 42..177 168 35.5 Plus
Muc68D-PB 1514 CG6004-PB 769..912 42..183 166 34 Plus
Muc68D-PB 1514 CG6004-PB 774..931 42..177 166 35.4 Plus
CG10911-PA 359 CG10911-PA 173..313 29..177 166 32.2 Plus
Muc68D-PB 1514 CG6004-PB 954..1083 42..171 164 35.6 Plus
Ppn-PC 2174 CG33103-PC 876..1012 42..177 163 35.7 Plus
Ppn-PF 2776 CG33103-PF 876..1012 42..177 163 35.7 Plus
Ppn-PG 2841 CG33103-PG 876..1012 42..177 163 35.7 Plus
Ppn-PE 2898 CG33103-PE 876..1012 42..177 163 35.7 Plus
Muc68D-PB 1514 CG6004-PB 725..878 42..183 163 31.8 Plus
CG10911-PA 359 CG10911-PA 208..333 38..171 163 32.8 Plus
Muc68D-PB 1514 CG6004-PB 750..904 38..184 161 33.3 Plus
Muc68D-PB 1514 CG6004-PB 966..1093 42..172 161 33.6 Plus
Muc68D-PB 1514 CG6004-PB 866..1012 42..183 160 31.3 Plus
CG10911-PA 359 CG10911-PA 197..327 42..174 159 35.3 Plus
Muc68D-PB 1514 CG6004-PB 925..1079 42..183 155 32.9 Plus
Ppn-PC 2174 CG33103-PC 946..1074 45..177 154 33.6 Plus
Ppn-PC 2174 CG33103-PC 894..1027 42..173 154 29.9 Plus
Ppn-PF 2776 CG33103-PF 894..1027 42..173 154 29.9 Plus
Ppn-PF 2776 CG33103-PF 946..1074 45..177 154 33.6 Plus
Ppn-PG 2841 CG33103-PG 894..1027 42..173 154 29.9 Plus
Ppn-PG 2841 CG33103-PG 946..1074 45..177 154 33.6 Plus
Ppn-PE 2898 CG33103-PE 894..1027 42..173 154 29.9 Plus
Ppn-PE 2898 CG33103-PE 946..1074 45..177 154 33.6 Plus
Muc68D-PB 1514 CG6004-PB 250..414 29..176 154 32.1 Plus
Muc68D-PB 1514 CG6004-PB 371..516 42..176 154 34.5 Plus
Ppn-PC 2174 CG33103-PC 951..1092 42..174 150 34.3 Plus
Ppn-PF 2776 CG33103-PF 951..1092 42..174 150 34.3 Plus
Ppn-PG 2841 CG33103-PG 951..1092 42..174 150 34.3 Plus
Ppn-PE 2898 CG33103-PE 951..1092 42..174 150 34.3 Plus
CG10911-PA 359 CG10911-PA 191..308 73..190 149 38.5 Plus
CG42525-PB 377 CG42525-PB 117..257 38..173 149 36.1 Plus
CG42525-PB 377 CG42525-PB 73..202 47..177 149 37.5 Plus
CG42525-PA 419 CG42525-PA 91..231 38..183 149 32.7 Plus
CG42525-PA 419 CG42525-PA 159..299 38..173 149 36.1 Plus
CG14120-PA 1371 CG14120-PA 426..578 37..183 149 31 Plus
Ppn-PC 2174 CG33103-PC 916..1062 38..177 148 31.5 Plus
Ppn-PF 2776 CG33103-PF 916..1062 38..177 148 31.5 Plus
Ppn-PG 2841 CG33103-PG 916..1062 38..177 148 31.5 Plus
Ppn-PE 2898 CG33103-PE 916..1062 38..177 148 31.5 Plus
Mur29B-PA 555 CG31901-PA 160..321 38..186 148 32.3 Plus
Ppn-PC 2174 CG33103-PC 828..967 37..174 147 28.6 Plus
Ppn-PC 2174 CG33103-PC 865..1010 51..184 147 34.7 Plus
Ppn-PF 2776 CG33103-PF 828..967 37..174 147 28.6 Plus
Ppn-PF 2776 CG33103-PF 865..1010 51..184 147 34.7 Plus
Ppn-PG 2841 CG33103-PG 828..967 37..174 147 28.6 Plus
Ppn-PG 2841 CG33103-PG 865..1010 51..184 147 34.7 Plus
Ppn-PE 2898 CG33103-PE 828..967 37..174 147 28.6 Plus
Ppn-PE 2898 CG33103-PE 865..1010 51..184 147 34.7 Plus
Mur29B-PA 555 CG31901-PA 224..385 38..186 147 31.1 Plus
CG42525-PB 377 CG42525-PB 97..244 47..177 146 34.7 Plus
CG42525-PA 419 CG42525-PA 118..247 37..173 146 32.4 Plus
CG42525-PA 419 CG42525-PA 139..286 47..177 146 34.7 Plus
CG42525-PA 419 CG42525-PA 98..244 38..177 145 35.3 Plus
CG42525-PA 419 CG42525-PA 133..286 26..173 145 32.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 18:32:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18325-PA 123 GM18325-PA 6..65 55..110 163 73.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 18:32:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD23141-PA 178 GD23141-PA 1..110 1..110 425 82 Plus