Clone IP07563 Report

Search the DGRC for IP07563

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:75
Well:63
Vector:pOT2
Associated Gene/TranscriptCG6893-RB
Protein status:IP07563.pep: gold
Preliminary Size:573
Sequenced Size:1191

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG6893 2007-11-01 Manual selection by Ken Wan
CG6893 2008-04-29 Picked prior to 5.5
CG6893 2008-08-15 Release 5.9 accounting
CG6893 2008-12-18 5.12 accounting

Clone Sequence Records

IP07563.complete Sequence

1191 bp assembled on 2008-06-18

GenBank Submission: BT033049

> IP07563.complete
CAAATACTCAAAAGTACACATTCACTTTGCTGTCAAATTAATCCCATCCG
GAAAAGTTCCCCTCGAAACAGAAAAAAAAAGATTGATGGACATACGAGCA
AAAAGAGTTATAAAGACGAAAAAGTGGCGGATAGGACAACATCCAGCAAG
CTGGCTATTCGGTTTGAAGCCCCCAAAGACGAAAAGATCAAAACGATAAT
ACGTCCACGGTGGTGGAGTGGCGGTGTGGCAGGTGCCATTGCGCAATGCT
TTACGGCACCTTTCGATCTGATCGAGGCTCGAATGGTGGTTATCAAGAAG
GACAGAGGAATGGCTTCAAATCTCCAACAGGCAATTCGAACGCATGGTTT
TATTTCACTATACGATGGATTAAGTGCCCAGTTATTGAGACAGCTGACAT
ACACCTCGATGCGGTTTCACCTGTACGAAATGGGAAAGGAGCACCTGGAT
GATCCTGCTGGTTTGTTGGACAAAGTGCTGGTGGCTGCATTGGCTGGTTG
TGTGGCTGGTGTGGTGGGTACACCCATGGAGTTGATCAACACCCGGATGC
AGGTCAATCGCGCGCTGCCCAAGGAAACGCGGTGGAACTATCGAAACGTC
TTCGATGGACTGTACCGTGTGACCAGGGAAGAGGGCTTTACGAAGCTGTA
CAGCGGATGTTTCCTCTCCTTTATGCGGTCCAGCCTCATCACCATCAGCC
AAAATGCTGCTTACGATCAGGCCAAGCAGATCTACGCAGAATTTTTTCAC
ATGAAGCACGACAACACATTGCTGCACCTGATAAGTTCCGTGACGGCTGC
TTTCGTCTGCGGTCCAATCATCAAGCCCATTGAGAACTTGAGATACCTCA
GAATGGTGGATTCAAGAAGATTGATAAATTCCATTTCCTATATGATGCGC
TTCGGAAGTCGCGGACCTTTTCGCGGTATGGTGCCCTATGTTTTGCGCAT
GGTACCCAATACGGTCATTACTTTTTTAAGTTTCGAGCAGCTTCGTGTTA
ATTTTGGGTACATTGAAATTGAAGATGATGAATGAGTGCGAGAAGCAATG
TGTGTCAGCCAAAAGTAGTATTACCTTTTGTATATGTATTTTAACACAAA
AGAAAGAATTATATACTTTTCTGGTAACAGAAGCACACAATAAATATAAC
GAAGATTTATATTAAAAAAAAAAAAAAAAAAAAAAAAAAAA

IP07563.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:09:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG6893-RB 1179 CG6893-RB 17..1179 1..1163 5815 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 11:52:43
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 18684898..18685344 718..1163 2170 99.6 Plus
chr3L 24539361 chr3L 18684462..18684837 346..721 1865 99.7 Plus
chr3L 24539361 chr3L 18683884..18684079 1..197 935 99.5 Plus
chr3L 24539361 chr3L 18684134..18684284 198..348 755 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:52:26 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 11:52:41
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 18695203..18695652 718..1167 2250 100 Plus
3L 28110227 3L 18694767..18695142 346..721 1880 100 Plus
3L 28110227 3L 18694188..18694384 1..197 985 100 Plus
3L 28110227 3L 18694439..18694589 198..348 755 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:03:37
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 18688303..18688752 718..1167 2250 100 Plus
3L 28103327 3L 18687867..18688242 346..721 1880 100 Plus
3L 28103327 3L 18687288..18687484 1..197 985 100 Plus
3L 28103327 3L 18687539..18687689 198..348 755 100 Plus
Blast to na_te.dros performed on 2019-03-16 11:52:41 has no hits.

IP07563.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 11:53:36 Download gff for IP07563.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 18683884..18684079 1..197 99 -> Plus
chr3L 18684134..18684282 198..346 100 -> Plus
chr3L 18684463..18684836 347..720 99 -> Plus
chr3L 18684901..18685344 721..1163 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:32:43 Download gff for IP07563.complete
Subject Subject Range Query Range Percent Splice Strand
CG6893-RB 1..753 283..1035 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:13:20 Download gff for IP07563.complete
Subject Subject Range Query Range Percent Splice Strand
CG6893-RB 1..753 283..1035 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 12:38:59 Download gff for IP07563.complete
Subject Subject Range Query Range Percent Splice Strand
CG6893-RB 1..753 283..1035 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 15:23:34 Download gff for IP07563.complete
Subject Subject Range Query Range Percent Splice Strand
CG6893-RB 1..753 283..1035 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:29:26 Download gff for IP07563.complete
Subject Subject Range Query Range Percent Splice Strand
CG6893-RB 1..753 283..1035 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:41:59 Download gff for IP07563.complete
Subject Subject Range Query Range Percent Splice Strand
CG6893-RB 2..1164 1..1163 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:13:19 Download gff for IP07563.complete
Subject Subject Range Query Range Percent Splice Strand
CG6893-RB 2..1164 1..1163 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 12:38:59 Download gff for IP07563.complete
Subject Subject Range Query Range Percent Splice Strand
CG6893-RB 2..1164 1..1163 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 15:23:35 Download gff for IP07563.complete
Subject Subject Range Query Range Percent Splice Strand
CG6893-RB 1..1156 8..1163 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:29:26 Download gff for IP07563.complete
Subject Subject Range Query Range Percent Splice Strand
CG6893-RB 2..1164 1..1163 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:53:36 Download gff for IP07563.complete
Subject Subject Range Query Range Percent Splice Strand
3L 18694188..18694384 1..197 100 -> Plus
3L 18694439..18694587 198..346 100 -> Plus
3L 18694768..18695141 347..720 100 -> Plus
3L 18695206..18695648 721..1163 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:53:36 Download gff for IP07563.complete
Subject Subject Range Query Range Percent Splice Strand
3L 18694188..18694384 1..197 100 -> Plus
3L 18694439..18694587 198..346 100 -> Plus
3L 18694768..18695141 347..720 100 -> Plus
3L 18695206..18695648 721..1163 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:53:36 Download gff for IP07563.complete
Subject Subject Range Query Range Percent Splice Strand
3L 18694188..18694384 1..197 100 -> Plus
3L 18694439..18694587 198..346 100 -> Plus
3L 18694768..18695141 347..720 100 -> Plus
3L 18695206..18695648 721..1163 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 12:38:59 Download gff for IP07563.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 18687288..18687484 1..197 100 -> Plus
arm_3L 18687539..18687687 198..346 100 -> Plus
arm_3L 18687868..18688241 347..720 100 -> Plus
arm_3L 18688306..18688748 721..1163 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:44:35 Download gff for IP07563.complete
Subject Subject Range Query Range Percent Splice Strand
3L 18687288..18687484 1..197 100 -> Plus
3L 18687539..18687687 198..346 100 -> Plus
3L 18687868..18688241 347..720 100 -> Plus
3L 18688306..18688748 721..1163 100   Plus

IP07563.hyp Sequence

Translation from 0 to 1034

> IP07563.hyp
QILKSTHSLCCQINPIRKSSPRNRKKKIDGHTSKKSYKDEKVADRTTSSK
LAIRFEAPKDEKIKTIIRPRWWSGGVAGAIAQCFTAPFDLIEARMVVIKK
DRGMASNLQQAIRTHGFISLYDGLSAQLLRQLTYTSMRFHLYEMGKEHLD
DPAGLLDKVLVAALAGCVAGVVGTPMELINTRMQVNRALPKETRWNYRNV
FDGLYRVTREEGFTKLYSGCFLSFMRSSLITISQNAAYDQAKQIYAEFFH
MKHDNTLLHLISSVTAAFVCGPIIKPIENLRYLRMVDSRRLINSISYMMR
FGSRGPFRGMVPYVLRMVPNTVITFLSFEQLRVNFGYIEIEDDE*

IP07563.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 11:31:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG6893-PB 250 CG6893-PB 1..250 95..344 1286 100 Plus
Dic3-PA 287 CG11196-PA 10..283 69..338 454 37 Plus
Dic4-PC 302 CG18363-PC 21..292 69..336 454 35.2 Plus
Dic4-PA 302 CG18363-PA 21..292 69..336 454 35.2 Plus
Dic1-PC 280 CG8790-PC 10..277 71..336 450 38.4 Plus

IP07563.pep Sequence

Translation from 0 to 1034

> IP07563.pep
QILKSTHSLCCQINPIRKSSPRNRKKKIDGHTSKKSYKDEKVADRTTSSK
LAIRFEAPKDEKIKTIIRPRWWSGGVAGAIAQCFTAPFDLIEARMVVIKK
DRGMASNLQQAIRTHGFISLYDGLSAQLLRQLTYTSMRFHLYEMGKEHLD
DPAGLLDKVLVAALAGCVAGVVGTPMELINTRMQVNRALPKETRWNYRNV
FDGLYRVTREEGFTKLYSGCFLSFMRSSLITISQNAAYDQAKQIYAEFFH
MKHDNTLLHLISSVTAAFVCGPIIKPIENLRYLRMVDSRRLINSISYMMR
FGSRGPFRGMVPYVLRMVPNTVITFLSFEQLRVNFGYIEIEDDE*

IP07563.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 17:55:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23637-PA 244 GF23637-PA 1..241 95..336 738 56.2 Plus
Dana\GF10808-PA 301 GF10808-PA 24..301 69..342 492 35.5 Plus
Dana\GF11222-PA 288 GF11222-PA 12..283 69..336 490 38.3 Plus
Dana\GF17597-PA 308 GF17597-PA 8..285 68..344 471 34.9 Plus
Dana\GF17595-PA 263 GF17595-PA 7..259 68..337 452 36 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 17:55:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG13673-PA 328 GG13673-PA 9..328 25..344 1540 88.1 Plus
Dere\GG19610-PA 280 GG19610-PA 7..280 68..339 489 37.9 Plus
Dere\GG15727-PA 300 GG15727-PA 21..300 69..344 462 34.4 Plus
Dere\GG10687-PA 288 GG10687-PA 10..283 69..338 416 37.3 Plus
Dere\GG15457-PA 304 GG15457-PA 18..287 70..338 376 32.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 17:55:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15856-PA 287 GH15856-PA 10..287 69..344 519 36.8 Plus
Dgri\GH19040-PA 288 GH19040-PA 6..279 68..339 482 34.4 Plus
Dgri\GH18903-PA 316 GH18903-PA 4..302 59..335 329 28.8 Plus
Dgri\GH15793-PA 310 GH15793-PA 6..305 61..344 318 27.6 Plus
Dgri\GH11016-PA 333 GH11016-PA 45..325 81..332 227 24.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:21:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG6893-PB 250 CG6893-PB 1..250 95..344 1286 100 Plus
Dic3-PA 287 CG11196-PA 10..283 69..338 454 37 Plus
Dic4-PC 302 CG18363-PC 21..292 69..336 454 35.2 Plus
Dic4-PA 302 CG18363-PA 21..292 69..336 454 35.2 Plus
Dic1-PC 280 CG8790-PC 10..277 71..336 450 38.4 Plus
Dic1-PA 280 CG8790-PA 10..277 71..336 450 38.4 Plus
Dic1-PB 280 CG8790-PB 10..277 71..336 450 38.4 Plus
Dic2-PC 304 CG4323-PC 18..287 70..338 412 33 Plus
Dic2-PA 304 CG4323-PA 18..287 70..338 412 33 Plus
CG7514-PA 301 CG7514-PA 18..296 73..343 318 27.2 Plus
CG1907-PA 317 CG1907-PA 8..304 56..337 317 29.2 Plus
CG18418-PA 311 CG18418-PA 21..293 74..331 301 26.1 Plus
Dic3-PB 170 CG11196-PB 10..136 69..194 236 40.6 Plus
Dic4-PB 173 CG18363-PB 21..171 69..216 213 31.8 Plus
Ucp4B-PA 337 CG18340-PA 56..329 87..332 210 25.4 Plus
Ucp4C-PA 335 CG9064-PA 45..327 76..332 184 24.4 Plus
Ucp4A-PB 340 CG6492-PB 49..336 76..336 175 23.4 Plus
Ucp4A-PA 340 CG6492-PA 49..336 76..336 175 23.4 Plus
Bmcp-PB 303 CG7314-PB 13..301 74..332 171 23.7 Plus
Bmcp-PA 303 CG7314-PA 13..301 74..332 171 23.7 Plus
CG8026-PB 304 CG8026-PB 28..302 73..331 168 24.6 Plus
CG8026-PD 322 CG8026-PD 28..302 73..331 167 24.9 Plus
CG16736-PA 277 CG16736-PA 13..263 81..323 166 24.2 Plus
CG18324-PB 307 CG18324-PB 9..293 74..331 162 22.5 Plus
CG32103-PD 350 CG32103-PD 39..339 58..329 157 20.8 Plus
CG32103-PC 363 CG32103-PC 52..352 58..329 157 20.8 Plus
CG32103-PE 583 CG32103-PE 272..572 58..329 157 20.8 Plus
CG32103-PB 583 CG32103-PB 272..572 58..329 157 20.8 Plus
CG18327-PB 304 CG18327-PB 9..293 74..331 153 24.1 Plus
CG18327-PA 304 CG18327-PA 9..293 74..331 153 24.1 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 17:55:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI24334-PA 280 GI24334-PA 8..277 70..337 463 36.1 Plus
Dmoj\GI11313-PA 254 GI11313-PA 6..252 100..341 434 40 Plus
Dmoj\GI12639-PA 273 GI12639-PA 1..261 80..338 427 35 Plus
Dmoj\GI10541-PA 289 GI10541-PA 10..286 70..341 423 34.5 Plus
Dmoj\GI12576-PA 310 GI12576-PA 16..296 70..335 337 29.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 17:55:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL22891-PA 314 GL22891-PA 35..308 69..339 786 53.1 Plus
Dper\GL24469-PA 282 GL24469-PA 7..280 68..339 519 40.2 Plus
Dper\GL22710-PA 295 GL22710-PA 7..292 59..341 510 37.5 Plus
Dper\GL10604-PA 290 GL10604-PA 10..283 69..338 476 36.9 Plus
Dper\GL24092-PA 299 GL24092-PA 18..287 70..338 457 34.8 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 17:55:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA19935-PA 321 GA19935-PA 23..315 50..339 766 50.3 Plus
Dpse\GA21325-PA 282 GA21325-PA 7..280 68..339 519 40.2 Plus
Dpse\GA23392-PA 295 GA23392-PA 7..292 59..341 515 37.5 Plus
Dpse\GA10831-PA 290 GA10831-PA 10..283 69..338 472 36.2 Plus
Dpse\GA18108-PA 299 GA18108-PA 18..287 70..338 460 35.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 17:55:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM14988-PA 268 GM14988-PA 9..252 67..310 1294 96.7 Plus
Dsec\GM24103-PA 280 GM24103-PA 10..280 71..339 481 38.7 Plus
Dsec\GM20734-PA 287 GM20734-PA 10..286 69..341 475 36.9 Plus
Dsec\GM14924-PA 302 GM14924-PA 21..292 69..336 471 35.8 Plus
Dsec\GM23191-PA 304 GM23191-PA 18..287 70..338 422 32.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 17:55:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD14765-PA 260 GD14765-PA 1..244 67..310 1293 96.7 Plus
Dsim\GD10201-PA 287 GD10201-PA 10..286 69..341 482 36.9 Plus
Dsim\GD18902-PA 280 GD18902-PA 10..280 71..339 475 38.3 Plus
Dsim\GD12330-PA 302 GD12330-PA 21..292 69..336 471 35.8 Plus
Dsim\GD20064-PA 304 GD20064-PA 18..287 70..338 421 32.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 17:55:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13745-PA 296 GJ13745-PA 16..294 67..343 853 56.9 Plus
Dvir\GJ11569-PA 302 GJ11569-PA 14..300 60..341 566 37.7 Plus
Dvir\GJ12758-PA 286 GJ12758-PA 9..281 68..338 515 37.8 Plus
Dvir\GJ10419-PA 288 GJ10419-PA 9..278 70..337 469 36 Plus
Dvir\GJ24196-PA 283 GJ24196-PA 10..279 70..338 373 33.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 17:55:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13938-PA 282 GK13938-PA 7..280 68..339 526 39.8 Plus
Dwil\GK21563-PA 291 GK21563-PA 9..286 69..344 523 37.9 Plus
Dwil\GK10769-PA 165 GK10769-PA 1..159 183..337 503 59.1 Plus
Dwil\GK22729-PA 314 GK22729-PA 15..285 70..338 466 35.9 Plus
Dwil\GK11904-PA 326 GK11904-PA 32..312 74..335 296 27.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 17:55:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE19970-PA 338 GE19970-PA 7..338 16..344 1583 88 Plus
Dyak\GE26266-PA 280 GE26266-PA 7..280 68..339 485 38.6 Plus
Dyak\GE23410-PA 287 GE23410-PA 10..286 69..341 476 36.2 Plus
Dyak\GE22058-PA 300 GE22058-PA 21..292 69..336 457 35.4 Plus
Dyak\GE11146-PA 304 GE11146-PA 18..287 70..338 432 33.3 Plus