Clone IP07613 Report

Search the DGRC for IP07613

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:76
Well:13
Vector:pOT2
Associated Gene/TranscriptCG11379-RA
Protein status:IP07613.pep: gold
Preliminary Size:663
Sequenced Size:1199

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG11379 2005-01-01 Successful iPCR screen
CG11379 2008-04-29 Release 5.5 accounting
CG11379 2008-08-15 Release 5.9 accounting
CG11379 2008-12-18 5.12 accounting

Clone Sequence Records

IP07613.complete Sequence

1199 bp (1199 high quality bases) assembled on 2006-01-26

GenBank Submission: BT024363

> IP07613.complete
ATTAATGCACAAGCACCAATCTCAAGCATTGATATCACAACTGACAACAG
TTTTCATGCAGTCCTAAGCGATCCAAATATTTGTCAAGATCCACATGTAC
AGTCCTATGATTGTTTCGGGTTGATCAGTCTTAATTCCGCGATGCAAAGC
AATGTACCAACACCGTTTGGGGGGCTTAACAAGTTTTCTCATCTGAACAT
GCCTGGCGGACAATGGTCCCAGGAATTCAAGTTTACAGCGCAAAACATGC
AGTGCTCTCACTACAGCGGTCTTCGCGAAAGTTTGCGAGCGGATTGGGCG
ACTTACGATCAGAATGCTACTCTTAAAACGAATGACCAAGGTGAGAAAGC
TTCGTTCAAAAAGTAACCAGTAAAAAAATGCTTATACAGTTACATATTTT
CTGCTTTAAAAGTCAGTTGAATAATTCAGTTTAAGGCTTTCTGACCCGAA
TTTACTCCCGTAAAACTGGAAGTGTACACCTAGGAGGACATCTGGAGATG
GCTCGACTAATGGCCTTGATCATGGCGGTGTTGCTTCACTCGGTACTGGG
CATCTCGTACTACTACTACTTTCGCGAATCTCCCGGCTCCGCTGCTCCTC
TCTTGGGCGCCTGGCTCTTTTCCGCCTGCGTTGTGACCCTTCTTCACGGG
GTGAGGATGTTTTCAAGTGCCCTGCCCGCCGATCAGCGGTTCAGGAATGG
GAATCGAAACCTTCGCGGCAATGAGTCGTCCTGGGCATCGCTCTTACTGG
AGACAGGCGTCTGCTGTTTGGTGCTGGATCTGACCCTTAGCAAACTGTGG
CATCGCATAGAGTCCCTCTGCCAGTGCGCCATTGTGGGCATACTCCAGGC
CTTGGCCGTCGAGGAGCAAACCTTCCTGGTCTGCGAGTACTGGACTTTGG
GCCTGACTACCGGCCTGATCGGCGCATGTCTTCTGTGGCTTTCCCTATGG
GCCACCGCGTTGCCCCAGAAGCTCCGCTGCGGGATGCTCGACTGGCGTCG
CACCCTTCATCGCCGCTGCTCCGCGCTGATCTTCGGAAGTCTCGAGCCCG
GCACTCCAATGCAGACCCAATCCCAGGGAAGCGCACAGAGCTTTGCCAAT
TGAGACGGAGGGGTGACCATTCCACTTCCACAGCCATATCACACTACCTC
AGTCAATAGCTAAATTTATGGTTCAAATTATAAAAAAAAAAAAAAAAAA

IP07613.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:18:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG11379-RA 663 CG11379-RA 1..663 441..1103 3300 99.8 Plus
CG17508.a 842 CG17508.a 370..749 1..380 1885 99.7 Plus
CG17508.e 1193 CG17508.e 332..674 1..343 1715 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 07:14:27
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 1074143..1074923 401..1181 3890 99.9 Plus
chr2R 21145070 chr2R 1496523..1496902 1..380 1885 99.7 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:52:33 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 07:14:25
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 1180167..1180948 401..1182 3895 99.9 Plus
2R 25286936 2R 5609150..5609529 1..380 1885 99.7 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:11:51
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 1188265..1189046 401..1182 3895 99.8 Plus
2R 25260384 2R 5610349..5610728 1..380 1885 99.7 Plus
Blast to na_te.dros performed on 2019-03-16 07:14:25 has no hits.

IP07613.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 07:15:12 Download gff for IP07613.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 1074143..1074923 401..1181 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:32:49 Download gff for IP07613.complete
Subject Subject Range Query Range Percent Splice Strand
CG11379-RA 1..606 498..1103 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:33:02 Download gff for IP07613.complete
Subject Subject Range Query Range Percent Splice Strand
CG11379-RA 1..606 498..1103 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:44:00 Download gff for IP07613.complete
Subject Subject Range Query Range Percent Splice Strand
CG11379-RA 1..606 498..1103 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:07:07 Download gff for IP07613.complete
Subject Subject Range Query Range Percent Splice Strand
CG11379-RA 1..606 498..1103 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:28:23 Download gff for IP07613.complete
Subject Subject Range Query Range Percent Splice Strand
CG11379-RA 1..606 498..1103 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:04:28 Download gff for IP07613.complete
Subject Subject Range Query Range Percent Splice Strand
CG11379-RA 1..663 441..1103 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:33:02 Download gff for IP07613.complete
Subject Subject Range Query Range Percent Splice Strand
CG11379-RA 1..783 400..1181 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:44:00 Download gff for IP07613.complete
Subject Subject Range Query Range Percent Splice Strand
CG11379-RA 1..783 400..1181 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:07:07 Download gff for IP07613.complete
Subject Subject Range Query Range Percent Splice Strand
CG11379-RA 1..663 441..1103 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:28:23 Download gff for IP07613.complete
Subject Subject Range Query Range Percent Splice Strand
CG11379-RA 1..783 400..1181 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:15:12 Download gff for IP07613.complete
Subject Subject Range Query Range Percent Splice Strand
X 1180167..1180947 401..1181 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:15:12 Download gff for IP07613.complete
Subject Subject Range Query Range Percent Splice Strand
X 1180167..1180947 401..1181 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:15:12 Download gff for IP07613.complete
Subject Subject Range Query Range Percent Splice Strand
X 1180167..1180947 401..1181 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:44:00 Download gff for IP07613.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 1074200..1074980 401..1181 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:57:36 Download gff for IP07613.complete
Subject Subject Range Query Range Percent Splice Strand
X 1188265..1189045 401..1181 99   Plus

IP07613.pep Sequence

Translation from 497 to 1102

> IP07613.pep
MARLMALIMAVLLHSVLGISYYYYFRESPGSAAPLLGAWLFSACVVTLLH
GVRMFSSALPADQRFRNGNRNLRGNESSWASLLLETGVCCLVLDLTLSKL
WHRIESLCQCAIVGILQALAVEEQTFLVCEYWTLGLTTGLIGACLLWLSL
WATALPQKLRCGMLDWRRTLHRRCSALIFGSLEPGTPMQTQSQGSAQSFA
N*

IP07613.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 13:10:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF22136-PA 204 GF22136-PA 1..202 1..199 635 64 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 13:10:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12831-PA 201 GG12831-PA 1..201 1..201 948 91 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 13:11:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH11998-PA 191 GH11998-PA 8..191 6..201 391 45.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:17:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG11379-PB 201 CG11379-PB 1..201 1..201 1056 100 Plus
CG11379-PA 201 CG11379-PA 1..201 1..201 1056 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 13:11:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15625-PA 191 GI15625-PA 8..191 6..201 425 50.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 13:11:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL14230-PA 183 GL14230-PA 1..182 1..200 442 48 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 13:11:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10960-PA 183 GA10960-PA 1..182 1..200 441 47.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 13:11:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM19116-PA 192 GM19116-PA 3..192 13..201 842 88 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 13:11:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD24707-PA 205 GD24707-PA 1..166 1..166 841 97.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 13:11:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ16337-PA 191 GJ16337-PA 6..191 4..201 420 49.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 13:11:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK19242-PA 190 GK19242-PA 1..177 1..195 422 50.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 13:11:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE16665-PA 201 GE16665-PA 1..201 1..201 966 93.5 Plus

IP07613.hyp Sequence

Translation from 497 to 1102

> IP07613.hyp
MARLMALIMAVLLHSVLGISYYYYFRESPGSAAPLLGAWLFSACVVTLLH
GVRMFSSALPADQRFRNGNRNLRGNESSWASLLLETGVCCLVLDLTLSKL
WHRIESLCQCAIVGILQALAVEEQTFLVCEYWTLGLTTGLIGACLLWLSL
WATALPQKLRCGMLDWRRTLHRRCSALIFGSLEPGTPMQTQSQGSAQSFA
N*

IP07613.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 11:32:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG11379-PB 201 CG11379-PB 1..201 1..201 1056 100 Plus
CG11379-PA 201 CG11379-PA 1..201 1..201 1056 100 Plus