Clone IP07727 Report

Search the DGRC for IP07727

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:77
Well:27
Vector:pOT2
Associated Gene/TranscriptCG12343-RA
Protein status:IP07727.pep: gold
Preliminary Size:681
Sequenced Size:1100

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG12343 2005-01-01 Successful iPCR screen
CG12343 2008-04-29 Release 5.5 accounting
CG12343 2008-08-15 Release 5.9 accounting
CG12343 2008-12-18 5.12 accounting

Clone Sequence Records

IP07727.complete Sequence

1100 bp (1100 high quality bases) assembled on 2005-01-13

GenBank Submission: BT022631

> IP07727.complete
AAAACAACGCATTTTCACAATTTCTAAAAACAAAACAAGTTTTTAATAAA
AATTACCTATGGAAAAGACGAAAACGGCTGCCGAAAAATTGGCGGAGCGC
AAGGCGCGTTTGCTGGACCTACACAAGAAGCGCCAGGAGGCGCGTACGGA
CAACCACCAGGAAGTGGTGGCAGAGGACGCTCGCAAGAAGCTCCCCAAGA
ACTGGGAGGCTCGCAAGCGACAGGCGGAATGGATACTAGCGGACGACAAG
GCGCGAGCCGAGGCGCAGGCAGCTGGCAAGGATTACGAGCGTTTGAAGCT
TTTGGAGGTATCCGCTGTGGATGCGGATCGCATTGAGAAAAAGAAGAAGC
GTAAAGACAATCCAGATCTTGGTTTCTCCACATACGAAGCTCAAACAGCT
AGACAGTACAACCGATTGGTCAAGAGTATGCCTGCTCGCGATTTGGAAAA
GTACGAGCGCCAGAAGGAGGAACTCGGTGACGCCTTCTACGGTGGAGCAC
ACACCACTTTGCATTCGAGGACGAAGGACACTCCAGGTGCTATTAACAAA
ATGGTAACAGACCTGGAGCAGCAGATAGAGCGCCGCAAGAAGTACTCTCG
CAGGAGGATCTACAACGACGATGCGGATGTGGACTTCATCAACGAGAGGA
ATTCCAAGTTCAACAAAAAGCTGGACCGCTTCTACAGCGAGCATACAGCC
GAGATCAAACAAAATTTGGAGCGGGGAACAGCTATTTAAGTTTAGTATTT
TATTACCCTTAAGATTAGAGTTCAATTTGTGCACGTATAATTTTTGCAAG
TGCAGTTTACATGAAATTCGCCTATAATACCACACAATCGTCCAATTGTT
TACACATAAAAGTTTAAACGTAGGAAATGTTGAAGCTGGAAGATTAAAAA
GTAAACTCATTATTTCGATATTAGATGTCCAAATTTTTCATTTTATTTCG
CGTAACTTTGTGAACATTCATCGTCGTTTGTTTTCTGAATGAACGTAGTA
GCGTTTTCGCCCTTTGTTTCCTGTGCACAAAGTACATAGTTGGATGCATG
GTCGGTGAAATAAAACGTCAATCTACATATCAAAAAAAAAAAAAAAAAAA

IP07727.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:45:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG12343-RA 1084 CG12343-RA 1..1084 1..1084 5420 100 Plus
RpS15Ab-RA 739 RpS15Ab-RA 568..739 1084..913 860 100 Minus
RpS15Aa.a 747 RpS15Aa.a 512..658 1084..938 690 97.9 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 13:41:20
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 6709778..6710858 1081..1 5375 99.8 Minus
chrX 22417052 chrX 13226623..13226766 938..1081 675 97.9 Plus
chr2L 23010047 chr2L 14745517..14745659 938..1081 520 92.4 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:53:09 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 13:41:19
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 10822238..10823321 1084..1 5420 100 Minus
X 23542271 X 13335791..13335937 938..1084 690 98 Plus
2L 23513712 2L 14746825..14746970 938..1084 535 92.5 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:35:14
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 10823437..10824520 1084..1 5420 100 Minus
X 23527363 X 13343889..13344035 938..1084 690 97.9 Plus
2L 23513712 2L 14746825..14746970 938..1084 545 92.5 Plus
Blast to na_te.dros performed 2019-03-16 13:41:19
Subject Length Description Subject Range Query Range Score Percent Strand
Idefix 7411 Idefix DME9736 7411bp Derived from AJ009736 (e1371475) (Rel. 58, Last updated, Version 1). 1579..1687 827..935 131 57.8 Plus
accord2 7650 accord2 QBERT 7650bp 6208..6329 907..785 125 58.9 Minus
mdg1 7480 mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). 5542..5574 773..741 111 81.8 Minus

IP07727.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 13:42:16 Download gff for IP07727.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 6709778..6710858 1..1081 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:33:24 Download gff for IP07727.complete
Subject Subject Range Query Range Percent Splice Strand
CG12343-RA 1..681 59..739 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:14:26 Download gff for IP07727.complete
Subject Subject Range Query Range Percent Splice Strand
CG12343-RA 1..681 59..739 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:21:57 Download gff for IP07727.complete
Subject Subject Range Query Range Percent Splice Strand
CG12343-RA 1..681 59..739 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:58:52 Download gff for IP07727.complete
Subject Subject Range Query Range Percent Splice Strand
CG12343-RA 1..681 59..739 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:23:50 Download gff for IP07727.complete
Subject Subject Range Query Range Percent Splice Strand
CG12343-RA 1..681 59..739 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:11:37 Download gff for IP07727.complete
Subject Subject Range Query Range Percent Splice Strand
CG12343-RA 1..1081 1..1081 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:14:26 Download gff for IP07727.complete
Subject Subject Range Query Range Percent Splice Strand
CG12343-RA 1..1081 1..1081 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:21:57 Download gff for IP07727.complete
Subject Subject Range Query Range Percent Splice Strand
CG12343-RA 52..973 1..922 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:58:52 Download gff for IP07727.complete
Subject Subject Range Query Range Percent Splice Strand
CG12343-RA 1..1081 1..1081 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:23:50 Download gff for IP07727.complete
Subject Subject Range Query Range Percent Splice Strand
CG12343-RA 52..973 1..922 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:42:16 Download gff for IP07727.complete
Subject Subject Range Query Range Percent Splice Strand
2R 10822241..10823321 1..1081 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:42:16 Download gff for IP07727.complete
Subject Subject Range Query Range Percent Splice Strand
2R 10822241..10823321 1..1081 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:42:16 Download gff for IP07727.complete
Subject Subject Range Query Range Percent Splice Strand
2R 10822241..10823321 1..1081 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:21:57 Download gff for IP07727.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 6709746..6710826 1..1081 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:34:25 Download gff for IP07727.complete
Subject Subject Range Query Range Percent Splice Strand
2R 10823440..10824520 1..1081 100   Minus

IP07727.pep Sequence

Translation from 58 to 738

> IP07727.pep
MEKTKTAAEKLAERKARLLDLHKKRQEARTDNHQEVVAEDARKKLPKNWE
ARKRQAEWILADDKARAEAQAAGKDYERLKLLEVSAVDADRIEKKKKRKD
NPDLGFSTYEAQTARQYNRLVKSMPARDLEKYERQKEELGDAFYGGAHTT
LHSRTKDTPGAINKMVTDLEQQIERRKKYSRRRIYNDDADVDFINERNSK
FNKKLDRFYSEHTAEIKQNLERGTAI*

IP07727.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 16:02:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF11082-PA 226 GF11082-PA 1..226 1..226 1103 92.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 16:02:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22714-PA 226 GG22714-PA 1..226 1..226 1147 96.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 16:02:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH21431-PA 226 GH21431-PA 1..226 1..226 1039 88.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:14:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG12343-PA 226 CG12343-PA 1..226 1..226 1157 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 16:02:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20654-PA 226 GI20654-PA 1..226 1..226 1036 85.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 16:02:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL17175-PA 226 GL17175-PA 1..226 1..226 1049 89.8 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 16:02:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA11568-PA 226 GA11568-PA 1..226 1..226 1049 89.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 16:02:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM20490-PA 226 GM20490-PA 1..226 1..226 1169 99.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 16:02:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD25952-PA 226 GD25952-PA 1..226 1..226 1175 100 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 16:02:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ20403-PA 226 GJ20403-PA 1..226 1..226 1000 85.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 16:02:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK15740-PA 224 GK15740-PA 3..224 5..226 1058 89.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 16:02:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE13071-PA 226 GE13071-PA 1..226 1..226 1157 97.8 Plus

IP07727.hyp Sequence

Translation from 58 to 738

> IP07727.hyp
MEKTKTAAEKLAERKARLLDLHKKRQEARTDNHQEVVAEDARKKLPKNWE
ARKRQAEWILADDKARAEAQAAGKDYERLKLLEVSAVDADRIEKKKKRKD
NPDLGFSTYEAQTARQYNRLVKSMPARDLEKYERQKEELGDAFYGGAHTT
LHSRTKDTPGAINKMVTDLEQQIERRKKYSRRRIYNDDADVDFINERNSK
FNKKLDRFYSEHTAEIKQNLERGTAI*

IP07727.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 11:37:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG12343-PA 226 CG12343-PA 1..226 1..226 1157 100 Plus