Clone IP07868 Report

Search the DGRC for IP07868

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:78
Well:68
Vector:pOT2
Associated Gene/TranscriptCG14034-RB
Protein status:IP07868.pep: gold
Preliminary Size:672
Sequenced Size:1125

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG14034 2005-01-01 Successful iPCR screen
CG14034 2008-04-29 Release 5.5 accounting
CG14034 2008-08-15 Release 5.9 accounting
CG14034 2008-12-18 5.12 accounting

Clone Sequence Records

IP07868.complete Sequence

1125 bp (1125 high quality bases) assembled on 2005-03-06

GenBank Submission: BT022547

> IP07868.complete
CTCAACGGAATCGAAGAGAATGATGAATAACATCTTGGTCTTAATAGGCT
TCTCGAGTGTTATGCTCGTTGCTGGCTTAGATGATATGAACTGTTTTTCC
CTGCAAAACGAAATTTGTCCCAATGCCAACATTTCCTTTTGGCTATACAC
AAAAGAAAATCAGGAGGGAACTAAGCTTTCAGTTTTTGAACTTAATCGTT
TTGAATTTTATCACCACAAACCGCTCAAGGTTCTGATCCATGGATTCAAC
GGGCACCGCGATTTCAGTCCCAATACCCAGCTACGTCCGCTGTTCCTGAC
ACAGGATTACAATTTGATATCCTTGGATTATCCAAAACTAGCCTATGAAC
CCTGCTATACGGAAGCGGTGCACAATGCCAAATACGTAGCTCGCTGTACT
GCTCAGTTGCTACGAGTACTCCTCGAGAGCGGATTGGTCAAAATTGAGGA
TCTGCACCTAATTGGCTTGGGCTTAGGTGCCCATGTCGCAGGCTTCATTG
GGCAGTTTCTTCCGGAACACAAGCTGGAGCATATTACAGCCCTCGATCCG
GCAAAACCATTTTACATGGTCAAGGATCCGGCTCTAAAGCTCGATCCCAC
TGATGCCAAGTTCGTGGACGTCGTGCACACGGATGTCACGATGCTTGGCT
TACTGGATGCAGTGGGTCACGTGGACTTCTACTTGAACATGGGTGTATCA
CAGCCCAACTGCGGACCCATTAATAAGATGGAGACTCATTTCTGCTACCA
TAACCGAGCAGCAGACTATTATGCCGAGTCTATTTCGTCACCTTCTGGAT
TCTATGGCTTCTACTGTCCCAATTTTAAAAGCTTCGCAAAGGGAATTTGC
ATTCCTGATAAAAATATAGAGCTGATGGGTTTTCACGTGGATCCGAAAGC
CAGAGGCAGGTATTTTCTGGATACCAATAATGGTCCTCCTTATGCCAAGG
GAGAGAACTTTACCTCAATAAGCCGCCAACTAAAAGGTCGAACTTTCGTG
AACGATGATATTATAGATAAATTGATTGGAACGTAGTAAGGGATGCTATC
CAAATCTTAAAACGAATATTTTTAATTCATAAATAAACATTGAATAATGT
ACCACATAAAAAAAAAAAAAAAAAA

IP07868.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:49:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG14034-RB 1171 CG14034-RB 40..1147 1..1108 5540 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 18:02:25
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 5214805..5215382 728..151 2890 100 Minus
chr2L 23010047 chr2L 5214312..5214521 1107..898 1050 100 Minus
chr2L 23010047 chr2L 5214574..5214742 897..729 845 100 Minus
chr2L 23010047 chr2L 5215435..5215540 150..45 530 100 Minus
chr2L 23010047 chr2L 5215586..5215633 48..1 240 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:53:40 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 18:02:23
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 5215705..5216282 728..151 2890 100 Minus
2L 23513712 2L 5215211..5215421 1108..898 1055 100 Minus
2L 23513712 2L 5215474..5215642 897..729 845 100 Minus
2L 23513712 2L 5216335..5216440 150..45 530 100 Minus
2L 23513712 2L 5216486..5216533 48..1 240 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:38:46
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 5215705..5216282 728..151 2890 100 Minus
2L 23513712 2L 5215211..5215421 1108..898 1055 100 Minus
2L 23513712 2L 5215474..5215642 897..729 845 100 Minus
2L 23513712 2L 5216335..5216440 150..45 530 100 Minus
2L 23513712 2L 5216486..5216533 48..1 240 100 Minus
Blast to na_te.dros performed on 2019-03-16 18:02:24 has no hits.

IP07868.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 18:03:03 Download gff for IP07868.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 5214312..5214521 898..1107 100 <- Minus
chr2L 5214574..5214742 729..897 100 <- Minus
chr2L 5214805..5215382 151..728 100 <- Minus
chr2L 5215435..5215537 48..150 100 <- Minus
chr2L 5215587..5215633 1..47 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:33:59 Download gff for IP07868.complete
Subject Subject Range Query Range Percent Splice Strand
CG14034-RB 1..1017 20..1036 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:19:57 Download gff for IP07868.complete
Subject Subject Range Query Range Percent Splice Strand
CG14034-RB 1..1017 20..1036 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:07:54 Download gff for IP07868.complete
Subject Subject Range Query Range Percent Splice Strand
CG14034-RB 1..1017 20..1036 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:04:01 Download gff for IP07868.complete
Subject Subject Range Query Range Percent Splice Strand
CG14034-RB 1..1017 20..1036 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:28:09 Download gff for IP07868.complete
Subject Subject Range Query Range Percent Splice Strand
CG14034-RB 1..1017 20..1036 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:20:18 Download gff for IP07868.complete
Subject Subject Range Query Range Percent Splice Strand
CG14034-RB 1..1107 1..1107 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:19:57 Download gff for IP07868.complete
Subject Subject Range Query Range Percent Splice Strand
CG14034-RB 1..1107 1..1107 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:07:54 Download gff for IP07868.complete
Subject Subject Range Query Range Percent Splice Strand
CG14034-RB 1..1107 1..1107 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:04:02 Download gff for IP07868.complete
Subject Subject Range Query Range Percent Splice Strand
CG14034-RB 1..1107 1..1107 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:28:09 Download gff for IP07868.complete
Subject Subject Range Query Range Percent Splice Strand
CG14034-RB 10..1116 1..1107 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:03:03 Download gff for IP07868.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5215212..5215421 898..1107 100 <- Minus
2L 5215474..5215642 729..897 100 <- Minus
2L 5215705..5216282 151..728 100 <- Minus
2L 5216335..5216437 48..150 100 <- Minus
2L 5216487..5216533 1..47 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:03:03 Download gff for IP07868.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5215212..5215421 898..1107 100 <- Minus
2L 5215474..5215642 729..897 100 <- Minus
2L 5215705..5216282 151..728 100 <- Minus
2L 5216335..5216437 48..150 100 <- Minus
2L 5216487..5216533 1..47 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:03:03 Download gff for IP07868.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5215212..5215421 898..1107 100 <- Minus
2L 5215474..5215642 729..897 100 <- Minus
2L 5215705..5216282 151..728 100 <- Minus
2L 5216335..5216437 48..150 100 <- Minus
2L 5216487..5216533 1..47 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:07:54 Download gff for IP07868.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 5215212..5215421 898..1107 100 <- Minus
arm_2L 5215474..5215642 729..897 100 <- Minus
arm_2L 5215705..5216282 151..728 100 <- Minus
arm_2L 5216335..5216437 48..150 100 <- Minus
arm_2L 5216487..5216533 1..47 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:40:09 Download gff for IP07868.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5215212..5215421 898..1107 100 <- Minus
2L 5215474..5215642 729..897 100 <- Minus
2L 5215705..5216282 151..728 100 <- Minus
2L 5216335..5216437 48..150 100 <- Minus
2L 5216487..5216533 1..47 100   Minus

IP07868.hyp Sequence

Translation from 0 to 1035

> IP07868.hyp
STESKRMMNNILVLIGFSSVMLVAGLDDMNCFSLQNEICPNANISFWLYT
KENQEGTKLSVFELNRFEFYHHKPLKVLIHGFNGHRDFSPNTQLRPLFLT
QDYNLISLDYPKLAYEPCYTEAVHNAKYVARCTAQLLRVLLESGLVKIED
LHLIGLGLGAHVAGFIGQFLPEHKLEHITALDPAKPFYMVKDPALKLDPT
DAKFVDVVHTDVTMLGLLDAVGHVDFYLNMGVSQPNCGPINKMETHFCYH
NRAADYYAESISSPSGFYGFYCPNFKSFAKGICIPDKNIELMGFHVDPKA
RGRYFLDTNNGPPYAKGENFTSISRQLKGRTFVNDDIIDKLIGT*

IP07868.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 11:40:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG14034-PC 338 CG14034-PC 1..338 7..344 1817 100 Plus
CG14034-PB 338 CG14034-PB 1..338 7..344 1817 100 Plus
CG34447-PA 389 CG34447-PA 22..335 23..336 621 41.8 Plus
CG34447-PB 389 CG34447-PB 22..335 23..336 621 41.8 Plus
CG13282-PB 484 CG13282-PB 72..355 39..318 546 38.2 Plus

IP07868.pep Sequence

Translation from 1 to 1035

> IP07868.pep
STESKRMMNNILVLIGFSSVMLVAGLDDMNCFSLQNEICPNANISFWLYT
KENQEGTKLSVFELNRFEFYHHKPLKVLIHGFNGHRDFSPNTQLRPLFLT
QDYNLISLDYPKLAYEPCYTEAVHNAKYVARCTAQLLRVLLESGLVKIED
LHLIGLGLGAHVAGFIGQFLPEHKLEHITALDPAKPFYMVKDPALKLDPT
DAKFVDVVHTDVTMLGLLDAVGHVDFYLNMGVSQPNCGPINKMETHFCYH
NRAADYYAESISSPSGFYGFYCPNFKSFAKGICIPDKNIELMGFHVDPKA
RGRYFLDTNNGPPYAKGENFTSISRQLKGRTFVNDDIIDKLIGT*

IP07868.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 16:37:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15520-PA 326 GF15520-PA 1..316 27..343 1045 61.4 Plus
Dana\GF14541-PA 465 GF14541-PA 68..351 39..318 540 37.2 Plus
Dana\GF14403-PA 361 GF14403-PA 57..345 39..317 514 39.4 Plus
Dana\GF11422-PA 349 GF11422-PA 2..291 48..323 416 35.9 Plus
Dana\GF14402-PA 389 GF14402-PA 173..371 69..283 379 39.9 Plus
Dana\GF14402-PA 389 GF14402-PA 1..102 217..318 210 41.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 16:37:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24519-PA 353 GG24519-PA 15..297 50..334 565 41.6 Plus
Dere\GG20104-PA 489 GG20104-PA 74..357 39..318 544 38.2 Plus
Dere\GG24523-PA 348 GG24523-PA 44..332 39..317 515 39.8 Plus
Dere\GG24521-PA 322 GG24521-PA 39..304 39..317 478 39.2 Plus
Dere\GG24314-PA 140 GG24314-PA 38..139 243..344 464 78.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 16:37:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH11187-PA 332 GH11187-PA 3..318 30..342 709 44.6 Plus
Dgri\GH11499-PA 384 GH11499-PA 22..316 25..318 665 44.3 Plus
Dgri\GH13774-PA 475 GH13774-PA 66..350 39..318 556 38.6 Plus
Dgri\GH11500-PA 334 GH11500-PA 39..322 39..317 554 43.5 Plus
Dgri\GH22562-PA 245 GH22562-PA 3..231 116..342 512 44.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:59:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG14034-PC 338 CG14034-PC 1..338 7..344 1817 100 Plus
CG14034-PB 338 CG14034-PB 1..338 7..344 1817 100 Plus
CG34447-PA 389 CG34447-PA 22..335 23..336 621 41.8 Plus
CG34447-PB 389 CG34447-PB 22..335 23..336 621 41.8 Plus
CG13282-PB 484 CG13282-PB 72..355 39..318 546 38.2 Plus
CG13282-PA 484 CG13282-PA 72..355 39..318 546 38.2 Plus
CG34448-PA 344 CG34448-PA 39..323 39..317 531 41.8 Plus
CG18641-PC 369 CG18641-PC 65..353 39..317 512 39.8 Plus
CG6472-PB 389 CG6472-PB 43..336 43..323 418 37.5 Plus
CG7367-PD 358 CG7367-PD 64..351 44..317 346 33.8 Plus
CG7367-PB 358 CG7367-PB 64..351 44..317 346 33.8 Plus
CG7367-PC 389 CG7367-PC 95..382 44..317 346 33.8 Plus
CG4582-PA 432 CG4582-PA 154..421 64..322 331 32.9 Plus
CG6431-PC 351 CG6431-PC 43..293 26..274 327 34.4 Plus
CG10357-PC 321 CG10357-PC 28..318 43..319 325 33.1 Plus
sxe2-PB 387 CG4979-PB 75..371 48..325 325 30.1 Plus
sxe2-PA 387 CG4979-PA 75..371 48..325 325 30.1 Plus
CG6431-PB 346 CG6431-PB 38..288 26..274 319 33.6 Plus
CG6847-PB 1000 CG6847-PB 173..463 56..314 301 29.7 Plus
CG6847-PA 1000 CG6847-PA 173..463 56..314 301 29.7 Plus
CG5966-PB 436 CG5966-PB 54..257 117..295 299 37.3 Plus
CG5966-PA 540 CG5966-PA 158..361 117..295 299 37.3 Plus
CG4267-PB 374 CG4267-PB 135..357 87..320 297 30.8 Plus
CG4267-PA 374 CG4267-PA 135..357 87..320 297 30.8 Plus
CG6295-PA 338 CG6295-PA 47..337 24..317 284 28.4 Plus
CG6277-PA 341 CG6277-PA 68..337 44..314 280 29.3 Plus
CG6296-PA 676 CG6296-PA 61..345 33..318 275 27.8 Plus
CG6271-PA 341 CG6271-PA 68..337 44..314 274 27.9 Plus
CG6283-PA 339 CG6283-PA 52..339 30..318 273 27.9 Plus
CG17292-PD 340 CG17292-PD 65..315 79..321 268 31.4 Plus
CG17292-PC 340 CG17292-PC 65..315 79..321 268 31.4 Plus
CG17292-PB 340 CG17292-PB 65..315 79..321 268 31.4 Plus
CG17292-PA 340 CG17292-PA 65..315 79..321 268 31.4 Plus
CG17192-PA 337 CG17192-PA 63..337 44..318 266 26.4 Plus
CG1986-PB 404 CG1986-PB 92..345 72..314 261 30.4 Plus
CG1986-PA 404 CG1986-PA 92..345 72..314 261 30.4 Plus
CG17191-PA 337 CG17191-PA 62..337 43..318 259 27.4 Plus
CG6675-PC 386 CG6675-PC 116..385 46..318 252 28.1 Plus
CG6675-PB 390 CG6675-PB 120..389 46..318 252 28.1 Plus
CG5665-PB 376 CG5665-PB 188..363 145..321 247 35 Plus
CG5162-PB 411 CG5162-PB 162..369 102..314 237 32.6 Plus
CG5162-PA 411 CG5162-PA 162..369 102..314 237 32.6 Plus
CG10116-PA 289 CG10116-PA 24..287 46..322 229 29.5 Plus
CG18258-PA 468 CG18258-PA 143..455 15..322 227 25.2 Plus
CG5665-PC 395 CG5665-PC 216..382 154..321 226 34.5 Plus
Yp2-PB 442 CG2979-PB 248..413 149..316 174 32.9 Plus
Yp2-PA 442 CG2979-PA 248..413 149..316 174 32.9 Plus
Yp1-PB 439 CG2985-PB 247..357 149..261 164 40.5 Plus
Yp1-PA 439 CG2985-PA 247..357 149..261 164 40.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 16:37:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI17858-PA 371 GI17858-PA 60..367 30..342 815 49.1 Plus
Dmoj\GI16995-PA 380 GI16995-PA 8..318 11..318 668 41.7 Plus
Dmoj\GI17178-PA 468 GI17178-PA 60..344 39..318 567 39.9 Plus
Dmoj\GI17384-PA 365 GI17384-PA 27..289 39..315 520 41.6 Plus
Dmoj\GI16996-PA 648 GI16996-PA 16..290 12..283 520 44 Plus
Dmoj\GI16996-PA 648 GI16996-PA 344..632 39..317 508 39.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 16:37:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL26468-PA 383 GL26468-PA 8..316 10..318 651 42.4 Plus
Dper\GL26469-PA 348 GL26469-PA 44..332 39..317 523 39.8 Plus
Dper\GL19328-PA 392 GL19328-PA 22..268 69..318 504 39.8 Plus
Dper\GL18504-PA 392 GL18504-PA 145..385 76..317 317 35.5 Plus
Dper\GL26628-PA 326 GL26628-PA 30..288 21..274 314 32.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 16:37:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA28874-PA 383 GA28874-PA 8..316 10..318 645 42.4 Plus
Dpse\GA12169-PA 474 GA12169-PA 59..350 31..318 526 36.5 Plus
Dpse\GA15027-PA 348 GA15027-PA 44..332 39..317 523 39.8 Plus
Dpse\GA28876-PA 340 GA28876-PA 35..326 31..317 517 41.5 Plus
Dpse\GA19587-PA 326 GA19587-PA 30..288 21..274 311 32.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 16:37:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18032-PA 324 GM18032-PA 1..322 21..342 1689 96.3 Plus
Dsec\GM18227-PA 389 GM18227-PA 9..338 11..339 640 41.9 Plus
Dsec\GM18228-PA 344 GM18228-PA 39..323 39..317 526 41.8 Plus
Dsec\GM18230-PA 348 GM18230-PA 44..332 39..317 515 39.8 Plus
Dsec\GM17154-PA 353 GM17154-PA 12..224 102..318 482 42.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 16:37:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22660-PA 316 GD22660-PA 1..316 29..344 1659 96.5 Plus
Dsim\GD17823-PA 389 GD17823-PA 9..335 11..336 639 41.9 Plus
Dsim\GD21893-PA 484 GD21893-PA 72..355 39..318 546 38.2 Plus
Dsim\GD22835-PA 309 GD22835-PA 39..287 39..283 483 42.2 Plus
Dsim\GD11231-PA 394 GD11231-PA 48..341 43..323 441 37.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 16:37:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ17356-PA 345 GJ17356-PA 1..337 8..341 867 48.7 Plus
Dvir\GJ24193-PA 384 GJ24193-PA 28..322 25..318 646 43.2 Plus
Dvir\GJ24204-PA 336 GJ24204-PA 41..324 39..317 542 44.6 Plus
Dvir\GJ22109-PA 446 GJ22109-PA 39..323 39..318 531 38.2 Plus
Dvir\GJ24215-PA 350 GJ24215-PA 46..334 39..317 516 39.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 16:37:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK23736-PA 521 GK23736-PA 166..462 23..318 699 45 Plus
Dwil\GK18152-PA 428 GK18152-PA 21..304 39..318 527 37.2 Plus
Dwil\GK23738-PA 339 GK23738-PA 35..323 39..317 522 40.1 Plus
Dwil\GK23737-PA 319 GK23737-PA 38..308 33..317 451 37.8 Plus
Dwil\GK22029-PA 364 GK22029-PA 26..329 43..327 434 35.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 16:37:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE19008-PA 393 GE19008-PA 47..391 3..342 1439 77.1 Plus
Dyak\GE15105-PA 370 GE15105-PA 37..316 39..318 594 43.3 Plus
Dyak\GE15108-PA 609 GE15108-PA 15..299 50..336 574 42 Plus
Dyak\GE13160-PA 483 GE13160-PA 72..355 39..318 544 38.2 Plus
Dyak\GE15114-PA 348 GE15114-PA 44..332 39..317 515 39.8 Plus
Dyak\GE15108-PA 609 GE15108-PA 359..588 74..317 424 40.4 Plus