Clone IP07891 Report

Search the DGRC for IP07891

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:78
Well:91
Vector:pOT2
Associated Gene/TranscriptCG34357-RB
Protein status:IP07891.pep: gold
Preliminary Size:696
Sequenced Size:2304

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG14652 2005-01-01 Successful iPCR screen
CG34357 2008-04-29 Release 5.5 accounting
CG34357 2008-08-15 Release 5.9 accounting
CG34357 2008-12-18 5.12 accounting

Clone Sequence Records

IP07891.complete Sequence

2304 bp (2304 high quality bases) assembled on 2006-07-25

GenBank Submission: BT028785

> IP07891.complete
AGGCGTCTGGTTGTGTGTCCGCAGAAAGTTCATCCAAAATTCCGCGCTGA
CTTCGATTTGTGTTACGGCTACTGCTGCCCCAAAAAGAAGGCAACGTGGT
CTGTGCAAGAAGTCCCCACTCAAGTCTGAAACTTGTGACAGCCAGGGATA
CACGAGCCTAGTAGCTTAAAATTACCAAAGCGCAGGAAGTCAAGTGGTCG
AAGCGCTTTAATTGCCCCCGGTTGAAGTCATTTTCCGCTCTTTTAAAGTG
CGTGTGTGTGCGTTTGGGCGAAGTGCGCTTTTTTCGCAGTCGGGCTAAGG
ACCTGAAACAGAACTATCTTCGCCGAGACAAGGCTTTTCGGTTGTCGACA
GTCATCAAAGCGGCTTAGAGTTACAGTAAGACGAACGAGGCGTCTAAGCC
AAGCGCATAGGCATTTTCGTACATTTGGGCAATGTTGGAAGGCACTGTAA
ATGGCAAGCAATAGAAACACAATTATGTCAAATTCGAAAGTTCGTTAACA
TCAACAATCAATGCAATAACAACAAATGCTGCTGCGACAACGGCATCCGC
AGGCCCCTCAAAATGTAATTGGGCCAGGGCGTGGCAGCTTGGCAGTGGGC
AACGGTCAACGGCAACGGCAGCAGCAATAGCAACACCACTGAACCGCAAA
AATCGACAGCAGCAGCATCAGGACACCAAACAAAATACGCAACATAAATG
AAGTTAACAACCTGTCAAATTGCTAAAGTATTTCCGCTGTTGACAGCCTT
CTTCTTCCTCAATTCTCCCAGCGCAGCCTCATTATCCTTCGGTTTGAGTC
CCACCTTCGCCTCCGCCTCCGCCTCCAGCTCCTTGTCCTCGTCATCGTCC
TCGTCCTCCCACTTTCACTCAGAAAAACCCCTCCACTCGGATGTACTCGT
CCTGCGAGCGGCCAAGCCATCCAGGGCCATTGCAACAAGCGCAGATGCGG
CTACGCGGTCTGTGCCAGCGTCAGCGGCAGAAACAACACTTGGCAGCAAG
TCAATTTGGCCGACAGCTATACAAACAAAAAGTCCACGTAATGCGCGTGA
AGCTGGACGTCACAAACGTCAAATGCAAAAGCCCGCAATCCAGCAGCAAC
CACTGCAGCAGCAGCAACAGCGCATTAATCCCCCGCAGCAAAAGCGACAG
CAGCAGCAGCAGCAGCAGCAGCAAGTGCAACATCAGGCTCAACGAGTGGG
CGTTTTAATACCTCCTTCGCTGCACGTTGATTTGACGCATGTGCAACAGG
GCTTTCAGAATTTCCTTGACTTTTTCCAACTGCATTTATTTAATGTCACC
GTCGATTTTCTGCGTGATGTGGACTTAAGCGGCTTCATTAAATTACTCGA
GCTGCCCAAGTACACGAGCGTTATAAAGACTTTAAATGCGGGCATTATGG
TAGCCAGCCACGTGGACGTGGACCAAAATTCCACTATCTACATTGGCACG
CCCAGCCAGCCACGTCAGCAACATCGGCTGCATTCAAAGCAGGAGCAGGA
GCCCCATCGTCATCATCATGAGGACTCCAAAGCAAAACAGTTTCCAGCGG
GCGAGGAGGAATCCCATTCATCGGGCGAGACCGAGGAAAATCATTGGAAC
GACGCCCGCATCTTCTCGGGTCACTGTCATCAGCTGGCGGAGCAACTGGC
CCTCGATTTCAATAAGACCGTCGTCCTGTGGCCCTGTCCGCGAATGAAAA
TCTCCAGCAATTTTCTTCCGTCATTCGAAGCAATTTCCCTAGCGGTACAA
AGCATTTCCACCAAGTTGAACTGGTCGCAAGTTGATATCTATATTGGCGC
TGCACACCGCTTCATCGGACTGCCAGAAATAGAAAAGAACCATCTTGGGG
ATTTAGATCCCGGTCGAACCTATCTACTTGTATCTATGAGTGCCACCGCC
ACTCTCCTGGAATTCACAATCAGCTCTGTTGCCTCTTGTTGTCAAAAAAT
TGCCGACCAGACATAGCGGCTCTAAGCCCCTTAGATGACGCTGCCTTCAA
CCATATTATTCTTAATTGTCCGCTACTCGACCACGACAGGAAAGGTTTCA
TGGAGGACCTAGTGGACCCGTCGATCCTTGAATAGCACATGATCTCGAGG
TGGCGATGAAGCCGCTGCGTGCAGCTGAGAGGCATTTAGCCGAAAGAAGA
CAACAGGAACCCAGCTACGGAACACAGAGCGCACTCTGGCCCTGCTGTAG
TTCAGCAGAGACTCCAGGACTCACCGTGTTGTAAAATATTTGTATAGAAA
GTGAATATTGATTAAAACATAATATTCTTTATGTCATAAAAAAAAAAAAA
AAAA

IP07891.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:13:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG34357-RB 2289 CG34357-RB 1..2289 1..2289 11415 99.9 Plus
CG34357.a 5798 CG34357.a 12..1810 1..1799 8965 99.8 Plus
CG34357.b 4426 CG34357.b 1..470 1330..1799 2350 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 15:01:36
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 363523..364408 1322..437 4400 99.8 Minus
chr3R 27901430 chr3R 340351..340839 2287..1799 2445 100 Minus
chr3R 27901430 chr3R 359867..360244 1699..1322 1890 100 Minus
chr3R 27901430 chr3R 382413..382724 438..127 1560 100 Minus
chr3R 27901430 chr3R 383660..383785 126..1 630 100 Minus
chr3R 27901430 chr3R 348706..348805 1799..1700 500 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:53:47 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 15:01:33
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 4537805..4538690 1322..437 4400 99.8 Minus
3R 32079331 3R 4514615..4515120 2304..1799 2485 99.4 Minus
3R 32079331 3R 4534149..4534526 1699..1322 1890 100 Minus
3R 32079331 3R 4556695..4557006 438..127 1560 100 Minus
3R 32079331 3R 4557942..4558067 126..1 630 100 Minus
3R 32079331 3R 4522988..4523087 1799..1700 500 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:07:07
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 4278636..4279521 1322..437 4400 99.7 Minus
3R 31820162 3R 4255446..4255951 2304..1799 2485 99.4 Minus
3R 31820162 3R 4274980..4275357 1699..1322 1890 100 Minus
3R 31820162 3R 4297526..4297837 438..127 1560 100 Minus
3R 31820162 3R 4298773..4298898 126..1 630 100 Minus
3R 31820162 3R 4263819..4263918 1799..1700 500 100 Minus
Blast to na_te.dros performed 2019-03-16 15:01:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2305..2868 611..1193 263 54.4 Plus
Dvir\Het-A 6610 Dvir\Het-A HETAVIR 6610bp 3246..3322 610..685 121 67.1 Plus

IP07891.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 15:02:11 Download gff for IP07891.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 383660..383785 1..126 100   Minus
chr3R 340351..340838 1800..2287 100 <- Minus
chr3R 348706..348805 1700..1799 100 <- Minus
chr3R 359867..360243 1323..1699 100 <- Minus
chr3R 363523..363658 1187..1322 98 == Minus
chr3R 363754..363985 860..1091 100 == Minus
chr3R 364045..364407 438..800 100 <- Minus
chr3R 382414..382724 127..437 100 <- Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 16:55:02 Download gff for IP07891.complete
Subject Subject Range Query Range Percent Splice Strand
CG34357-RB 1..1269 698..1966 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:21:27 Download gff for IP07891.complete
Subject Subject Range Query Range Percent Splice Strand
CG34357-RB 1..1269 698..1966 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 16:03:52 Download gff for IP07891.complete
Subject Subject Range Query Range Percent Splice Strand
CG34357-RB 1..1269 698..1966 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 15:39:50 Download gff for IP07891.complete
Subject Subject Range Query Range Percent Splice Strand
CG34357-RB 1..1269 698..1966 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:35:50 Download gff for IP07891.complete
Subject Subject Range Query Range Percent Splice Strand
CG34357-RB 1..1269 698..1966 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:55:02 Download gff for IP07891.complete
Subject Subject Range Query Range Percent Splice Strand
CG34357-RB 1..2287 1..2287 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:21:27 Download gff for IP07891.complete
Subject Subject Range Query Range Percent Splice Strand
CG34357-RB 1..2287 1..2287 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:03:52 Download gff for IP07891.complete
Subject Subject Range Query Range Percent Splice Strand
CG34357-RB 1..2287 1..2287 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 15:39:50 Download gff for IP07891.complete
Subject Subject Range Query Range Percent Splice Strand
CG34357-RB 1..2287 1..2287 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:35:50 Download gff for IP07891.complete
Subject Subject Range Query Range Percent Splice Strand
CG34357-RB 1..2287 1..2287 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 15:02:11 Download gff for IP07891.complete
Subject Subject Range Query Range Percent Splice Strand
3R 4514632..4515119 1800..2287 100 <- Minus
3R 4522988..4523087 1700..1799 100 <- Minus
3R 4534149..4534525 1323..1699 100 <- Minus
3R 4537805..4538689 438..1322 99 <- Minus
3R 4556696..4557006 127..437 100 <- Minus
3R 4557942..4558067 1..126 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 15:02:11 Download gff for IP07891.complete
Subject Subject Range Query Range Percent Splice Strand
3R 4514632..4515119 1800..2287 100 <- Minus
3R 4522988..4523087 1700..1799 100 <- Minus
3R 4534149..4534525 1323..1699 100 <- Minus
3R 4537805..4538689 438..1322 99 <- Minus
3R 4556696..4557006 127..437 100 <- Minus
3R 4557942..4558067 1..126 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 15:02:11 Download gff for IP07891.complete
Subject Subject Range Query Range Percent Splice Strand
3R 4514632..4515119 1800..2287 100 <- Minus
3R 4522988..4523087 1700..1799 100 <- Minus
3R 4534149..4534525 1323..1699 100 <- Minus
3R 4537805..4538689 438..1322 99 <- Minus
3R 4556696..4557006 127..437 100 <- Minus
3R 4557942..4558067 1..126 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:03:52 Download gff for IP07891.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 340354..340841 1800..2287 100 <- Minus
arm_3R 348710..348809 1700..1799 100 <- Minus
arm_3R 359871..360247 1323..1699 100 <- Minus
arm_3R 363527..364411 438..1322 99 <- Minus
arm_3R 382418..382728 127..437 100 <- Minus
arm_3R 383664..383789 1..126 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:50:10 Download gff for IP07891.complete
Subject Subject Range Query Range Percent Splice Strand
3R 4255463..4255950 1800..2287 100 <- Minus
3R 4263819..4263918 1700..1799 100 <- Minus
3R 4274980..4275356 1323..1699 100 <- Minus
3R 4278636..4279520 438..1322 99 <- Minus
3R 4297527..4297837 127..437 100 <- Minus
3R 4298773..4298898 1..126 100   Minus

IP07891.pep Sequence

Translation from 697 to 1965

> IP07891.pep
MKLTTCQIAKVFPLLTAFFFLNSPSAASLSFGLSPTFASASASSSLSSSS
SSSSHFHSEKPLHSDVLVLRAAKPSRAIATSADAATRSVPASAAETTLGS
KSIWPTAIQTKSPRNAREAGRHKRQMQKPAIQQQPLQQQQQRINPPQQKR
QQQQQQQQQVQHQAQRVGVLIPPSLHVDLTHVQQGFQNFLDFFQLHLFNV
TVDFLRDVDLSGFIKLLELPKYTSVIKTLNAGIMVASHVDVDQNSTIYIG
TPSQPRQQHRLHSKQEQEPHRHHHEDSKAKQFPAGEEESHSSGETEENHW
NDARIFSGHCHQLAEQLALDFNKTVVLWPCPRMKISSNFLPSFEAISLAV
QSISTKLNWSQVDIYIGAAHRFIGLPEIEKNHLGDLDPGRTYLLVSMSAT
ATLLEFTISSVASCCQKIADQT*

IP07891.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 01:03:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF18353-PA 355 GF18353-PA 1..349 1..334 576 48.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 01:03:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG16496-PA 218 GG16496-PA 1..189 1..208 463 64.9 Plus
Dere\GG11488-PA 103 GG11488-PA 1..103 234..340 430 75.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 01:03:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19528-PA 243 GH19528-PA 200..241 167..208 167 71.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:01:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG34357-PB 422 CG34357-PB 1..422 1..422 2167 100 Plus
CG34357-PD 1685 CG34357-PD 1..392 1..391 1891 95.2 Plus
CG34357-PC 1685 CG34357-PC 1..392 1..391 1891 95.2 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 01:03:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI23005-PA 247 GI23005-PA 148..245 115..208 170 44.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 01:03:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL21737-PA 388 GL21737-PA 109..325 98..334 405 50 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 01:03:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA30045-PA 1699 GA30045-PA 1..379 1..336 567 46.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 01:03:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM10696-PA 228 GM10696-PA 1..201 1..208 683 87 Plus
Dsec\GM10697-PA 136 GM10697-PA 1..108 234..341 517 87 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 01:03:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD19670-PA 232 GD19670-PA 1..205 1..208 674 87.5 Plus
Dsim\GD19671-PA 107 GD19671-PA 1..107 234..340 530 88.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 01:03:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ24598-PA 239 GJ24598-PA 193..237 164..208 172 68.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 01:03:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13469-PA 260 GK13469-PA 1..227 1..208 251 44.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 01:03:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE15033-PA 89 GE15033-PA 6..89 255..340 343 72.1 Plus

IP07891.hyp Sequence

Translation from 697 to 1965

> IP07891.hyp
MKLTTCQIAKVFPLLTAFFFLNSPSAASLSFGLSPTFASASASSSLSSSS
SSSSHFHSEKPLHSDVLVLRAAKPSRAIATSADAATRSVPASAAETTLGS
KSIWPTAIQTKSPRNAREAGRHKRQMQKPAIQQQPLQQQQQRINPPQQKR
QQQQQQQQQVQHQAQRVGVLIPPSLHVDLTHVQQGFQNFLDFFQLHLFNV
TVDFLRDVDLSGFIKLLELPKYTSVIKTLNAGIMVASHVDVDQNSTIYIG
TPSQPRQQHRLHSKQEQEPHRHHHEDSKAKQFPAGEEESHSSGETEENHW
NDARIFSGHCHQLAEQLALDFNKTVVLWPCPRMKISSNFLPSFEAISLAV
QSISTKLNWSQVDIYIGAAHRFIGLPEIEKNHLGDLDPGRTYLLVSMSAT
ATLLEFTISSVASCCQKIADQT*

IP07891.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 11:41:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG34357-PB 422 CG34357-PB 1..422 1..422 2167 100 Plus
CG34357-PD 1685 CG34357-PD 1..392 1..391 1891 95.2 Plus
CG34357-PC 1685 CG34357-PC 1..392 1..391 1891 95.2 Plus