Clone IP07920 Report

Search the DGRC for IP07920

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:79
Well:20
Vector:pOT2
Associated Gene/TranscriptElo68beta-RC
Protein status:IP07920.pep: validated not full length
Preliminary Size:666
Sequenced Size:1122

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG11801 2005-01-01 Successful iPCR screen
Elo68beta 2008-04-29 Release 5.5 accounting
Elo68beta 2008-08-15 Release 5.9 accounting
Elo68beta 2008-12-18 5.12 accounting

Clone Sequence Records

IP07920.complete Sequence

1122 bp (1122 high quality bases) assembled on 2005-03-06

GenBank Submission: BT022503

> IP07920.complete
ACACAGTTAATAAAAGCTCGACCTTGAATATCAATTAAAATACAGTCAGT
AAAATGTTAAGTGAAAATGTTATAGGTAAAACCTAGACCTTGACCAAAGT
TTATGCTCCAGCGACTTGTAATTAGATTTTGACGAAAAATATCAACGCAT
CAACGGAGCGATCAAAATGCGTATATAAGTGACTGACCCTTGGCAGTCGG
ATCTGATTCAAACTTGGAGCCACCATATGCCATGACGTCGTCGATGGGTA
ATGATACGAAAACTGAGAGCTATTCGTATCCATTCGCGGATTTGGCGGAC
GAACGGACGCAGGATTGGCCACTGGTCAAATCGCCGTGGAATATTATCGC
ACTGCTTGCCCTCTATTTACTTATGGTGCGCTATGCGCCCAAATGGACAG
CCAGATGCAAGCCGCTGCAGTTGAGAGTGCCCTTGTTTTGTCACAGCTTG
GCAATGATATTTCTCAATGGTTATATTTGCCTGGAGTTCCTGACGGCTTC
ACTAAGTCTTGGCTACAACTTCGCATGTCAGGAGTGTCGGGTGAGCCATG
ATCCACATGAAATCCGGGTGAGTTGGCGAAGCAACTGGGAATTGAGAAGT
TAAGAATTCGAAATCTGATGCAGATAGCGGCAGCTATGTGGTGGTTTTAC
ATCTCAAAGATACTGGAATTCGTAGACACGGCATTCTTCATCTTGCGCCA
CAAATGGAACCAGCTGAGCTTCCTACATGTGTACCACCATAGCACCATGT
TCTTGTTTTGCTGGACTTATGTCAAATGGCTGCCGACGGGTTCAACCTTT
TTTCCAAGCATGATAAACTCTTTTGTGCACGTGATTATGTACAGCTATTA
TGCATTGAGTGTGCTGGGTCCTCGAGTCCAGAGGTTCCTCTGGTGGAAGC
GCTACTTAACTGGCCTCCAGCTGGTCCAGTTTACCATTATCTTCTTTTGG
GCATCACAATTAGTTTTCCGGGGCTGTGAGTACGGAAAATGGTTAACGCC
AATCGGAGCTGCCTATATGGTGCCATTTCTCTTTATGTTCGGTAGGTTCT
ATGCTCAAAAATACTGTGTTTCGGCAGTTGTAAAGAAAGCCAAGTAAATA
TAGCAAAAAAAAAAAAAAAAAA

IP07920.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:49:17
Subject Length Description Subject Range Query Range Score Percent Strand
Elo68beta-RC 1106 Elo68beta-RC 1..1106 1..1106 5530 100 Plus
Elo68beta-RB 833 Elo68beta-RB 359..833 623..1097 2375 100 Plus
Elo68beta-RB 833 Elo68beta-RB 1..359 209..567 1795 100 Plus
Elo68alpha-RA 938 Elo68alpha-RA 356..675 639..958 925 85.9 Plus
Elo68alpha-RA 938 Elo68alpha-RA 125..258 352..485 385 85.8 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 18:09:00
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 11092386..11092789 404..1 1975 99.3 Minus
chr3L 24539361 chr3L 11091928..11092321 795..402 1955 99.7 Minus
chr3L 24539361 chr3L 11091558..11091866 1104..796 1545 100 Minus
chr3L 24539361 chr3L 11093021..11093170 958..809 570 92 Minus
chr3L 24539361 chr3L 11093251..11093405 793..639 385 83.2 Minus
chr3L 24539361 chr3L 11093495..11093663 576..408 245 76.3 Minus
chr3L 24539361 chr3L 11093723..11093775 404..352 190 90.6 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:53:55 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 18:08:57
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 11101503..11101906 404..1 2020 100 Minus
3L 28110227 3L 11101045..11101438 795..402 1970 100 Minus
3L 28110227 3L 11100673..11100983 1106..796 1555 100 Minus
3L 28110227 3L 11102138..11102287 958..809 570 92 Minus
3L 28110227 3L 11102368..11102522 793..639 385 83.2 Minus
3L 28110227 3L 11102612..11102780 576..408 260 76.9 Minus
3L 28110227 3L 11102855..11102907 404..352 190 90.6 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:38:41
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 11094603..11095006 404..1 2020 100 Minus
3L 28103327 3L 11094145..11094538 795..402 1970 100 Minus
3L 28103327 3L 11093773..11094083 1106..796 1555 100 Minus
3L 28103327 3L 11095238..11095387 958..809 570 92 Minus
3L 28103327 3L 11095468..11095622 793..639 385 83.2 Minus
3L 28103327 3L 11095803..11095880 485..408 210 84.6 Minus
3L 28103327 3L 11095955..11096007 404..352 190 90.5 Minus
Blast to na_te.dros performed on 2019-03-15 18:08:58 has no hits.

IP07920.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 18:09:42 Download gff for IP07920.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 11091558..11091866 796..1104 100 <- Minus
chr3L 11091928..11092318 405..795 99 <- Minus
chr3L 11092386..11092789 1..404 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:34:12 Download gff for IP07920.complete
Subject Subject Range Query Range Percent Splice Strand
Elo68beta-RC 1..480 618..1097 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:19:48 Download gff for IP07920.complete
Subject Subject Range Query Range Percent Splice Strand
Elo68beta-RB 336..810 623..1097 100   Plus
Elo68beta-RB 1..335 232..566 100 == Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:54:31 Download gff for IP07920.complete
Subject Subject Range Query Range Percent Splice Strand
Elo68beta-RB 1..335 232..566 100 == Plus
Elo68beta-RB 336..810 623..1097 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:03:53 Download gff for IP07920.complete
Subject Subject Range Query Range Percent Splice Strand
Elo68beta-RC 1..480 618..1097 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:54:14 Download gff for IP07920.complete
Subject Subject Range Query Range Percent Splice Strand
Elo68beta-RB 1..335 232..566 100 == Plus
Elo68beta-RB 336..810 623..1097 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:20:06 Download gff for IP07920.complete
Subject Subject Range Query Range Percent Splice Strand
Elo68beta-RC 1..1104 1..1104 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:19:48 Download gff for IP07920.complete
Subject Subject Range Query Range Percent Splice Strand
Elo68beta-RB 1..335 232..566 100 == Plus
Elo68beta-RB 336..817 623..1104 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:54:31 Download gff for IP07920.complete
Subject Subject Range Query Range Percent Splice Strand
Elo68beta-RB 1..358 209..566 100 == Plus
Elo68beta-RB 359..840 623..1104 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:03:54 Download gff for IP07920.complete
Subject Subject Range Query Range Percent Splice Strand
Elo68beta-RC 1..1104 1..1104 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:54:14 Download gff for IP07920.complete
Subject Subject Range Query Range Percent Splice Strand
Elo68beta-RB 1..358 209..566 100 == Plus
Elo68beta-RB 359..840 623..1104 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:09:42 Download gff for IP07920.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11100675..11100983 796..1104 100 <- Minus
3L 11101045..11101435 405..795 100 <- Minus
3L 11101503..11101906 1..404 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:09:42 Download gff for IP07920.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11100675..11100983 796..1104 100 <- Minus
3L 11101045..11101435 405..795 100 <- Minus
3L 11101503..11101906 1..404 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:09:42 Download gff for IP07920.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11100675..11100983 796..1104 100 <- Minus
3L 11101045..11101435 405..795 100 <- Minus
3L 11101503..11101906 1..404 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:54:31 Download gff for IP07920.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 11093775..11094083 796..1104 100 <- Minus
arm_3L 11094145..11094535 405..795 100 <- Minus
arm_3L 11094603..11095006 1..404 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:40:01 Download gff for IP07920.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11093775..11094083 796..1104 100 <- Minus
3L 11094145..11094535 405..795 100 <- Minus
3L 11094603..11095006 1..404 100   Minus

IP07920.pep Sequence

Translation from 617 to 1096

> IP07920.pep
MQIAAAMWWFYISKILEFVDTAFFILRHKWNQLSFLHVYHHSTMFLFCWT
YVKWLPTGSTFFPSMINSFVHVIMYSYYALSVLGPRVQRFLWWKRYLTGL
QLVQFTIIFFWASQLVFRGCEYGKWLTPIGAAYMVPFLFMFGRFYAQKYC
VSAVVKKAK*

IP07920.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 16:35:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10549-PA 273 GF10549-PA 115..273 1..159 563 62.9 Plus
Dana\GF18858-PA 325 GF18858-PA 113..267 5..159 353 41.9 Plus
Dana\GF16148-PA 277 GF16148-PA 113..262 1..149 341 46 Plus
Dana\GF18505-PA 350 GF18505-PA 110..267 1..159 341 44 Plus
Dana\GF18506-PA 395 GF18506-PA 137..292 1..157 337 44.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 16:35:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG13940-PA 268 GG13940-PA 110..267 1..158 740 86.7 Plus
Dere\GG13939-PA 268 GG13939-PA 110..267 1..158 664 77.2 Plus
Dere\GG11145-PA 322 GG11145-PA 113..261 5..159 351 42.6 Plus
Dere\GG11532-PA 354 GG11532-PA 110..266 1..157 348 44.6 Plus
Dere\GG12507-PA 277 GG12507-PA 113..262 1..149 337 45.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 16:35:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16129-PA 268 GH16129-PA 108..266 1..159 555 63.5 Plus
Dgri\GH18330-PA 323 GH18330-PA 113..264 5..156 351 42.1 Plus
Dgri\GH17398-PA 285 GH17398-PA 113..262 1..149 344 45.3 Plus
Dgri\GH18532-PA 351 GH18532-PA 110..258 1..149 340 45.6 Plus
Dgri\GH19244-PA 298 GH19244-PA 111..256 4..149 339 44.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:07:52
Subject Length Description Subject Range Query Range Score Percent Strand
Elo68beta-PB 269 CG11801-PB 111..269 1..159 871 98.7 Plus
Elo68alpha-PA 262 CG32072-PA 104..260 1..157 711 79 Plus
CG31523-PF 354 CG31523-PF 110..262 1..153 381 45.8 Plus
CG31523-PE 354 CG31523-PE 110..262 1..153 381 45.8 Plus
CG31523-PG 354 CG31523-PG 110..262 1..153 381 45.8 Plus
CG31523-PD 354 CG31523-PD 110..262 1..153 381 45.8 Plus
CG31523-PA 354 CG31523-PA 110..262 1..153 381 45.8 Plus
CG31523-PB 354 CG31523-PB 110..262 1..153 381 45.8 Plus
CG31523-PC 354 CG31523-PC 110..262 1..153 381 45.8 Plus
CG31522-PF 365 CG31522-PF 110..258 1..149 377 45 Plus
CG31522-PB 365 CG31522-PB 110..258 1..149 377 45 Plus
CG31522-PD 365 CG31522-PD 110..258 1..149 377 45 Plus
CG31522-PI 392 CG31522-PI 137..285 1..149 377 45 Plus
CG31522-PH 364 CG31522-PH 114..257 6..149 375 46.5 Plus
CG31522-PG 364 CG31522-PG 114..257 6..149 375 46.5 Plus
CG31522-PA 364 CG31522-PA 114..257 6..149 375 46.5 Plus
bond-PC 322 CG6921-PC 109..261 1..159 373 42.1 Plus
bond-PA 322 CG6921-PA 109..261 1..159 373 42.1 Plus
bond-PB 322 CG6921-PB 109..261 1..159 373 42.1 Plus
sit-PA 295 CG5278-PA 111..266 4..159 369 42.9 Plus
CG2781-PA 329 CG2781-PA 109..258 1..149 367 43.2 Plus
CG5326-PA 277 CG5326-PA 113..262 1..149 363 45.3 Plus
CG33110-PA 337 CG33110-PA 152..292 10..149 342 42.6 Plus
CG17821-PA 262 CG17821-PA 110..254 8..149 274 39.3 Plus
eloF-PA 257 CG16905-PA 103..244 10..149 268 40.8 Plus
CG18609-PA 263 CG18609-PA 108..250 10..149 253 35 Plus
CG9459-PA 265 CG9459-PA 112..262 10..158 251 35.1 Plus
CG16904-PA 262 CG16904-PA 106..256 8..156 246 34.4 Plus
CG9458-PA 264 CG9458-PA 112..253 10..149 244 35.2 Plus
CG6660-PA 272 CG6660-PA 109..263 1..159 239 35 Plus
CG8534-PA 265 CG8534-PA 111..260 10..158 238 34.4 Plus
CG31141-PA 253 CG31141-PA 108..245 10..149 218 35.2 Plus
CG30008-PA 266 CG30008-PA 104..242 3..145 179 34.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 16:35:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI12398-PA 258 GI12398-PA 106..254 1..149 515 62.4 Plus
Dmoj\GI22068-PA 354 GI22068-PA 110..258 1..149 349 47 Plus
Dmoj\GI23310-PA 326 GI23310-PA 113..264 5..156 348 41.4 Plus
Dmoj\GI22725-PA 285 GI22725-PA 113..262 1..149 339 45.3 Plus
Dmoj\GI24279-PA 307 GI24279-PA 111..252 4..145 333 45.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 16:35:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL24915-PA 271 GL24915-PA 114..265 1..152 595 72.4 Plus
Dper\GL13683-PA 277 GL13683-PA 113..269 1..156 349 44.6 Plus
Dper\GL13680-PA 300 GL13680-PA 111..256 4..149 348 45.2 Plus
Dper\GL13809-PA 323 GL13809-PA 113..257 5..149 346 42.8 Plus
Dper\GL22347-PA 387 GL22347-PA 110..258 1..149 341 45.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 16:35:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA23552-PA 271 GA23552-PA 114..265 1..152 595 72.4 Plus
Dpse\GA18806-PA 277 GA18806-PA 113..269 1..156 349 44.6 Plus
Dpse\GA18780-PA 300 GA18780-PA 111..256 4..149 348 45.2 Plus
Dpse\GA19958-PA 321 GA19958-PA 113..266 5..158 347 40.3 Plus
Dpse\GA16298-PA 359 GA16298-PA 110..258 1..149 342 45.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 16:35:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24776-PA 268 GM24776-PA 111..268 1..159 770 92.5 Plus
Dsec\GM24775-PA 262 GM24775-PA 104..261 1..158 646 75.3 Plus
Dsec\GM26443-PA 322 GM26443-PA 113..261 5..159 352 43.2 Plus
Dsec\GM10700-PA 354 GM10700-PA 110..266 1..157 348 44.6 Plus
Dsec\GM23639-PA 277 GM23639-PA 113..262 1..149 337 45.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 16:35:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12827-PA 267 GD12827-PA 109..267 1..159 772 91.2 Plus
Dsim\GD12826-PA 262 GD12826-PA 104..261 1..158 653 75.9 Plus
Dsim\GD20962-PA 322 GD20962-PA 113..261 5..159 352 43.2 Plus
Dsim\GD19675-PA 354 GD19675-PA 110..266 1..157 348 44.6 Plus
Dsim\GD18449-PA 277 GD18449-PA 113..262 1..149 337 45.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 16:35:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12287-PA 261 GJ12287-PA 105..256 1..152 539 65.1 Plus
Dvir\GJ24166-PA 327 GJ24166-PA 113..264 5..156 350 41.4 Plus
Dvir\GJ24117-PA 354 GJ24117-PA 110..258 1..149 348 47 Plus
Dvir\GJ24664-PA 285 GJ24664-PA 113..262 1..149 339 45.3 Plus
Dvir\GJ23058-PA 299 GJ23058-PA 111..256 4..149 336 43.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 16:35:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK12306-PA 226 GK12306-PA 110..216 1..107 475 79.4 Plus
Dwil\GK12817-PA 322 GK12817-PA 113..257 5..149 344 42.1 Plus
Dwil\GK13749-PA 359 GK13749-PA 110..268 1..159 341 44 Plus
Dwil\GK14434-PA 285 GK14434-PA 113..262 1..149 340 45.3 Plus
Dwil\GK14432-PA 295 GK14432-PA 111..256 4..149 339 44.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 16:35:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20239-PA 268 GE20239-PA 110..268 1..159 724 83.6 Plus
Dyak\GE20238-PA 268 GE20238-PA 110..267 1..158 675 78.5 Plus
Dyak\GE10310-PA 322 GE10310-PA 113..261 5..159 351 42.6 Plus
Dyak\GE25346-PA 354 GE25346-PA 110..266 1..157 348 44.6 Plus
Dyak\GE24028-PA 277 GE24028-PA 113..262 1..149 337 45.3 Plus

IP07920.hyp Sequence

Translation from 617 to 1096

> IP07920.hyp
MQIAAAMWWFYISKILEFVDTAFFILRHKWNQLSFLHVYHHSTMFLFCWT
YVKWLPTGSTFFPSMINSFVHVIMYSYYALSVLGPRVQRFLWWKRYLTGL
QLVQFTIIFFWASQLVFRGCEYGKWLTPIGAAYMVPFLFMFGRFYAQKYC
VSAVVKKAK*

IP07920.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 11:42:31
Subject Length Description Subject Range Query Range Score Percent Strand
Elo68beta-PB 269 CG11801-PB 111..269 1..159 871 98.7 Plus
Elo68alpha-PA 262 CG32072-PA 104..260 1..157 711 79 Plus
CG31523-PF 354 CG31523-PF 110..262 1..153 381 45.8 Plus
CG31523-PE 354 CG31523-PE 110..262 1..153 381 45.8 Plus
CG31523-PG 354 CG31523-PG 110..262 1..153 381 45.8 Plus