BDGP Sequence Production Resources |
Search the DGRC for IP07978
Library: | IP |
Tissue Source: | Pooled D melanogaster cDNA libraries |
Created by: | |
Date Registered: | 2004-07-08 |
Comments: | |
Original Plate Number: | 79 |
Well: | 78 |
Vector: | pOT2 |
Associated Gene/Transcript | CG14260-RA |
Protein status: | IP07978.pep: gold |
Preliminary Size: | 750 |
Sequenced Size: | 937 |
Gene | Date | Evidence |
---|---|---|
CG14260 | 2005-01-01 | Successful iPCR screen |
CG14260 | 2008-04-29 | Release 5.5 accounting |
CG14260 | 2008-08-15 | Release 5.9 accounting |
CG14260 | 2008-12-18 | 5.12 accounting |
937 bp (937 high quality bases) assembled on 2005-01-13
GenBank Submission: BT022463
> IP07978.complete AGCAAAGCCTCCAAAAAATCCCCAGTCACTATGAACTGCAAGCTACGCCG CCTGGACCTGTTGCGGAATGGCCAAAAGTCGGACTGCGAGCTCCATGTCT CGCAACCGGACAAGTTGAAGGAGGGCAAGCGTTGTCCATGCATTTTCCGC TGCCACCAGGTGATGCTCATCTCCGCCTCCGCGGAGTTCGAGCGCCTGAT CAGGGATCCCGAGTTCCAGAAGAACAAGCGAGTGATCAGCGTGGACGACG CCTCTCCCACCGCCTACGAGGCGTTGCTCCTCTACATCTACACGTACGAG GTGTGCAATGCGGTGACCATCGACATGTGCGGTGACCTCATGCTGCTGGC CGAGCGCTACGAGATGCTGGACTTCATCGACTGCTACATCGACAAGCTGG CCCACCAGGAGTGGCCCATGGAGGTGGTTCTGCAGGTCTTCCACCTGGCC AGCGAGCACCACCATCCGGCACTGATGGATCTCGTGGCGAAAAAAATCCT CCCCGTAGCCACGCAGGTGCTCATGGACAACTCGTTCCTCAAGCTGAGTG TTAAGGAGCTAAAGGCTCTGATGATAATCCTGAAAAAGGATGGAGATCTC TCCGATCACGAACTGCTGACCTCGCTGAAGAACTACCAGGATGTGAACAA CCTGCGCTACGAGGACATGGAGCAGTTCCAGCAGCTCGTTGAGGTAACCC AGTTGTTCGGTCACGTTCTCTTCGAAGTGGATGGCACCATAGTTGTGCCC GAAGAAGAAAAACCTTCGCCGGAGGAATAGATAGGTTTGCTTACCACCCA AGGAAATAGACAGGATGGTGTACATATCTAGAGGGATCATTTATTGGATT AGGGATCGAAAAACAAACAAAATCGAATTCATATCGGCTTAAAGAATAAA TACTACCTATAAACATAATAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14260-RA | 920 | CG14260-RA | 1..920 | 1..920 | 4600 | 100 | Plus |
nc_19523.a | 941 | nc_19523.a | 42..533 | 1..492 | 2460 | 100 | Plus |
nc_19523.a | 941 | nc_19523.a | 534..941 | 509..916 | 2040 | 100 | Plus |
l(3)mbt-RA | 5361 | l(3)mbt-RA | 5167..5361 | 920..726 | 975 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 23088389..23088880 | 1..492 | 100 | -> | Plus |
chr3R | 23088929..23089354 | 493..919 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14260-RA | 1..750 | 31..780 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14260-RA | 1..750 | 31..780 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14260-RA | 1..750 | 31..780 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14260-RA | 1..750 | 31..780 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14260-RA | 1..750 | 31..780 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14260-RA | 1..919 | 1..919 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14260-RA | 1..919 | 1..919 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14260-RA | 1..919 | 1..919 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14260-RA | 1..919 | 1..919 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14260-RA | 1..919 | 1..919 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 27265457..27265948 | 1..492 | 100 | -> | Plus |
3R | 27265997..27266423 | 493..919 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 27265457..27265948 | 1..492 | 100 | -> | Plus |
3R | 27265997..27266423 | 493..919 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 27265457..27265948 | 1..492 | 100 | -> | Plus |
3R | 27265997..27266423 | 493..919 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 23091179..23091670 | 1..492 | 100 | -> | Plus |
arm_3R | 23091719..23092145 | 493..919 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 27006288..27006779 | 1..492 | 100 | -> | Plus |
3R | 27006828..27007254 | 493..919 | 100 | Plus |
Translation from 0 to 779
> IP07978.hyp SKASKKSPVTMNCKLRRLDLLRNGQKSDCELHVSQPDKLKEGKRCPCIFR CHQVMLISASAEFERLIRDPEFQKNKRVISVDDASPTAYEALLLYIYTYE VCNAVTIDMCGDLMLLAERYEMLDFIDCYIDKLAHQEWPMEVVLQVFHLA SEHHHPALMDLVAKKILPVATQVLMDNSFLKLSVKELKALMIILKKDGDL SDHELLTSLKNYQDVNNLRYEDMEQFQQLVEVTQLFGHVLFEVDGTIVVP EEEKPSPEE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14260-PA | 249 | CG14260-PA | 1..249 | 11..259 | 1296 | 100 | Plus |
CG14260-PB | 166 | CG14260-PB | 1..154 | 11..164 | 821 | 100 | Plus |
CG14262-PA | 312 | CG14262-PA | 76..309 | 16..247 | 262 | 29.6 | Plus |
Translation from 0 to 779
> IP07978.pep SKASKKSPVTMNCKLRRLDLLRNGQKSDCELHVSQPDKLKEGKRCPCIFR CHQVMLISASAEFERLIRDPEFQKNKRVISVDDASPTAYEALLLYIYTYE VCNAVTIDMCGDLMLLAERYEMLDFIDCYIDKLAHQEWPMEVVLQVFHLA SEHHHPALMDLVAKKILPVATQVLMDNSFLKLSVKELKALMIILKKDGDL SDHELLTSLKNYQDVNNLRYEDMEQFQQLVEVTQLFGHVLFEVDGTIVVP EEEKPSPEE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16280-PA | 260 | GF16280-PA | 1..248 | 11..259 | 942 | 69.7 | Plus |
Dana\GF18717-PA | 323 | GF18717-PA | 72..320 | 1..247 | 262 | 26.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11540-PA | 249 | GG11540-PA | 1..249 | 11..259 | 1192 | 90.4 | Plus |
Dere\GG12123-PA | 319 | GG12123-PA | 81..316 | 14..247 | 277 | 27.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19505-PA | 312 | GH19505-PA | 1..250 | 11..259 | 721 | 55.8 | Plus |
Dgri\GH21482-PA | 274 | GH21482-PA | 24..269 | 5..247 | 296 | 29.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14260-PA | 249 | CG14260-PA | 1..249 | 11..259 | 1296 | 100 | Plus |
CG14260-PB | 166 | CG14260-PB | 1..154 | 11..164 | 821 | 100 | Plus |
CG14262-PA | 312 | CG14262-PA | 76..309 | 16..247 | 262 | 29.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22256-PA | 265 | GI22256-PA | 1..221 | 11..233 | 620 | 54.5 | Plus |
Dmoj\GI10513-PA | 298 | GI10513-PA | 46..295 | 3..248 | 281 | 27.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24485-PA | 400 | GL24485-PA | 1..236 | 11..249 | 806 | 62.3 | Plus |
Dper\GL23048-PA | 297 | GL23048-PA | 59..296 | 14..248 | 272 | 26.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12865-PA | 389 | GA12865-PA | 1..236 | 11..249 | 807 | 62.3 | Plus |
Dpse\GA12866-PA | 297 | GA12866-PA | 59..296 | 14..248 | 272 | 26.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10382-PA | 249 | GM10382-PA | 1..249 | 11..259 | 1290 | 97.6 | Plus |
Dsec\GM10115-PA | 318 | GM10115-PA | 82..315 | 16..247 | 270 | 29.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15079-PA | 235 | GD15079-PA | 82..219 | 16..154 | 179 | 30.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24047-PA | 340 | GJ24047-PA | 1..247 | 11..258 | 751 | 58.6 | Plus |
Dvir\GJ23194-PA | 312 | GJ23194-PA | 74..309 | 13..247 | 289 | 28.7 | Plus |