Clone IP08012 Report

Search the DGRC for IP08012

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:80
Well:12
Vector:pOT2
Associated Gene/TranscriptCG15399-RA
Protein status:IP08012.pep: gold
Preliminary Size:729
Sequenced Size:845

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG15399 2005-01-01 Successful iPCR screen
CG15399 2008-04-29 Release 5.5 accounting
CG15399 2008-08-15 Release 5.9 accounting
CG15399 2008-12-18 5.12 accounting

Clone Sequence Records

IP08012.complete Sequence

845 bp (845 high quality bases) assembled on 2005-01-13

GenBank Submission: BT022443

> IP08012.complete
AACACAGAACCTCAAAGACACACAGAGATAGAAACAGATATGAAACAGAT
AGAGCTCAAGGATGTGCCGACAGTTCGCATCCTGATGTTGGGCGACAGAG
GTGTGGGCAAGACTAGTTTGACCAATTTGATGGCCACTACGGAAATTACG
CCCACTCCAGACTCGCGAACCGTTGGCGAGGAGTCGTGGCATGTCCAGGT
GCGGTTGCATGAGTATTCCAAGCCGGTGATCCTGCCGCCCACGCCCACCT
GGACAACGCCCTCCTCGTCGGAGGACTCCGAGAATTACCCGTATATGCGG
AGTACGCCCACCACCACGAATATCCTGTACTTTGTCGAGTTCTACGACCT
GAACAGCGATTGGCGCATGTGCCGCCAGCAGCGCGAAAGCTTCTATAAGA
ATATTGACGGCATCGTCCTCGTGTACAACATGCTGGAACTGAGCTCCCAG
GACAGCCTGCACGATTGGCTGTACGATCCGTTGCGACAGATCTGCAAGCA
TCGACATCTGCGCATCCGTTCCATATTGAAAAACCATAATGCGCCCATTC
TGGTGGTGGGCACCAACCTGGACAAGCTGATGCGACGACCACTGCGTCGA
AGGGGCAGCATTGCCCACCAGTTAAACGTCGAGGAGATGCTCGTCAATTG
CCTGGATCCCCAAAGCTTTGTGGACAAGAGCCGTAATCAGGGCAAACTGT
ACGGCTTCCTAAACCGCGTCATCGAGTTCAAGGAGCAATTTCCACTGTTA
AGTTTCCGCCACTTGTGACCTTTTATTTTTTAGTTTCCCATCAATTTTTT
TAATAAAATTTATGGAAAAATGAAAAAAAAAAAAAAAAAAAAAAA

IP08012.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:45:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG15399-RA 986 CG15399-RA 165..986 1..822 4110 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 16:48:58
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 2770606..2771328 822..99 3540 99.6 Minus
chr2L 23010047 chr2L 2771393..2771495 103..1 515 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:54:16 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 16:48:57
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2770882..2771607 824..99 3630 100 Minus
2L 23513712 2L 2771672..2771774 103..1 515 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:35:10
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2770882..2771607 824..99 3630 100 Minus
2L 23513712 2L 2771672..2771774 103..1 515 100 Minus
Blast to na_te.dros performed on 2019-03-15 16:48:57 has no hits.

IP08012.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 16:50:06 Download gff for IP08012.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 2771396..2771495 1..100 100   Minus
chr2L 2770606..2771326 101..822 99 <- Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:34:38 Download gff for IP08012.complete
Subject Subject Range Query Range Percent Splice Strand
CG15399-RA 1..729 40..768 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:14:18 Download gff for IP08012.complete
Subject Subject Range Query Range Percent Splice Strand
CG15399-RA 1..729 40..768 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:22:54 Download gff for IP08012.complete
Subject Subject Range Query Range Percent Splice Strand
CG15399-RA 1..729 40..768 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:58:47 Download gff for IP08012.complete
Subject Subject Range Query Range Percent Splice Strand
CG15399-RA 1..729 40..768 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:18:02 Download gff for IP08012.complete
Subject Subject Range Query Range Percent Splice Strand
CG15399-RA 1..729 40..768 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:11:22 Download gff for IP08012.complete
Subject Subject Range Query Range Percent Splice Strand
CG15399-RA 1..729 40..768 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:14:18 Download gff for IP08012.complete
Subject Subject Range Query Range Percent Splice Strand
CG15399-RA 3..824 1..822 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:22:54 Download gff for IP08012.complete
Subject Subject Range Query Range Percent Splice Strand
CG15399-RA 3..824 1..822 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:58:47 Download gff for IP08012.complete
Subject Subject Range Query Range Percent Splice Strand
CG15399-RA 1..729 40..768 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:18:02 Download gff for IP08012.complete
Subject Subject Range Query Range Percent Splice Strand
CG15399-RA 3..824 1..822 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:50:06 Download gff for IP08012.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2770884..2771605 101..822 100 <- Minus
2L 2771675..2771774 1..100 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:50:06 Download gff for IP08012.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2770884..2771605 101..822 100 <- Minus
2L 2771675..2771774 1..100 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:50:06 Download gff for IP08012.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2770884..2771605 101..822 100 <- Minus
2L 2771675..2771774 1..100 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:22:54 Download gff for IP08012.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 2770884..2771605 101..822 100 <- Minus
arm_2L 2771675..2771774 1..100 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:34:17 Download gff for IP08012.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2770884..2771605 101..822 100 <- Minus
2L 2771675..2771774 1..100 100   Minus

IP08012.pep Sequence

Translation from 0 to 767

> IP08012.pep
NTEPQRHTEIETDMKQIELKDVPTVRILMLGDRGVGKTSLTNLMATTEIT
PTPDSRTVGEESWHVQVRLHEYSKPVILPPTPTWTTPSSSEDSENYPYMR
STPTTTNILYFVEFYDLNSDWRMCRQQRESFYKNIDGIVLVYNMLELSSQ
DSLHDWLYDPLRQICKHRHLRIRSILKNHNAPILVVGTNLDKLMRRPLRR
RGSIAHQLNVEEMLVNCLDPQSFVDKSRNQGKLYGFLNRVIEFKEQFPLL
SFRHL*

IP08012.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 16:02:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF21747-PA 301 GF21747-PA 5..245 25..245 214 27.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 16:02:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24491-PA 242 GG24491-PA 1..242 14..255 978 80.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 16:02:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13768-PA 212 GH13768-PA 1..209 14..248 353 37.6 Plus
Dgri\GH12699-PA 272 GH12699-PA 5..229 25..255 240 28.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:50:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG15399-PA 242 CG15399-PA 1..242 14..255 1281 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 16:02:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI17908-PA 248 GI17908-PA 1..244 14..248 599 51.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 16:02:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL26439-PA 255 GL26439-PA 3..240 6..244 662 54 Plus
Dper\GL24648-PA 226 GL24648-PA 12..221 20..243 511 46.4 Plus
Dper\GL12949-PA 152 GL12949-PA 18..147 22..158 351 56.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 16:02:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA13702-PA 244 GA13702-PA 3..240 6..244 663 54 Plus
Dpse\GA22937-PA 238 GA22937-PA 10..238 13..245 596 54 Plus
Dpse\GA23936-PA 223 GA23936-PA 12..218 20..243 501 45.1 Plus
Dpse\GA18434-PA 281 GA18434-PA 6..224 25..247 229 28.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 16:02:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18198-PA 242 GM18198-PA 1..242 14..255 1028 88.8 Plus
Dsec\GM13469-PA 279 GM13469-PA 12..242 25..252 214 27.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 16:02:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22803-PA 241 GD22803-PA 1..241 14..255 999 87.2 Plus
Dsim\GD17309-PA 279 GD17309-PA 12..242 25..252 212 27.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 16:02:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ17416-PA 248 GJ17416-PA 1..244 14..248 646 53.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 16:02:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK18146-PA 247 GK18146-PA 4..242 15..248 639 53.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 16:02:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE15029-PA 240 GE15029-PA 1..235 14..255 998 77.7 Plus

IP08012.hyp Sequence

Translation from 0 to 767

> IP08012.hyp
NTEPQRHTEIETDMKQIELKDVPTVRILMLGDRGVGKTSLTNLMATTEIT
PTPDSRTVGEESWHVQVRLHEYSKPVILPPTPTWTTPSSSEDSENYPYMR
STPTTTNILYFVEFYDLNSDWRMCRQQRESFYKNIDGIVLVYNMLELSSQ
DSLHDWLYDPLRQICKHRHLRIRSILKNHNAPILVVGTNLDKLMRRPLRR
RGSIAHQLNVEEMLVNCLDPQSFVDKSRNQGKLYGFLNRVIEFKEQFPLL
SFRHL*

IP08012.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 11:45:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG15399-PA 242 CG15399-PA 1..242 14..255 1281 100 Plus