IP08088.complete Sequence
986 bp (971 high quality bases) assembled on 2008-12-09
GenBank Submission: BT022371.2
> IP08088.complete
AGAACTAGTCTCGAGTTTTTTTTTTTTTTTTTGTCAATTTGCGTAGAATA
AAATTGAGCTACGTATATTAAAATAATTCTCAAAATGGTAGAGGGCATGA
TAAAAAAGCTAACTGCTATTTTATTTGGGCTTGTATTGGCTGTGTTATTT
CGAGTAATTATACCCTTTACTCTGCGACTTAAAAGCGCTGAAATAACCAT
TAATGTGCTTAACTGTTTTAATTTTCTAACAAGTACCGTTTCCATTACCA
TTTGCCTGAATTTGGTCAGCCTATACTTAGCCAATTTGCGTGATGATTGG
CTTGTTCTCGGGCTTATACCGCTGCAGATACTCGTCCTTCATTGGACTTA
CTTCACAATTTCAAAACAACTAGAAGCCATGAACAGGAGCTATAGTACAT
TCATGGATAGCTTAAACCTTAAATGGCTGGCATACTCCAATTTTAACGAG
ACAGATTGGCCTTCGATTGAAAATGCGGTTTTATGCTGTGGACTGGAGGG
TCCCCGTTCTTATATGGATTATCTACAAGGGGTTCCAACCCACTGCTACC
ATCCCGACCTTATCACCCAAGGTTGCAGTGACTTTGTTAAAAACATTTTT
ATGCCGATACAACATATAAGTCATTTGCAGCTCAGATTGGCTATTTTTGT
GGAACTGGTAATTTTACTTATTCTTGCTGCAACGCTTTTGAAGAAATGTA
TTTCTTTGATCGGCGAAAGGAAACATAAAAGAGTTATTACACACGGGCTT
GCGGTACTAATAGATTTAGTTAAAAACACATTTTGAAACATTAGCCTTAT
TAACCCTAACCAAATACTACTACTCTATACACTACCATGTAACCATTCTT
GAGTACTAAATGCAGTTTCTTGTAATGTTTGTATTGTTTTAATCTATGCC
ACTGTATTGCATACAATATGTAGATGACAAATCGAAATGGAACAAAGAAA
TAAATTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
IP08088.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 21:14:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31600-RA | 952 | CG31600-RA | 1..932 | 29..960 | 4660 | 100 | Plus |
CG31600.a | 927 | CG31600.a | 284..917 | 327..960 | 3170 | 100 | Plus |
CG31600.a | 927 | CG31600.a | 1..284 | 29..312 | 1420 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 13:51:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2L | 23010047 | chr2L | 21912796..21913276 | 957..477 | 2285 | 98.3 | Minus |
chr2L | 23010047 | chr2L | 21913542..21913725 | 312..129 | 905 | 99.5 | Minus |
chr2L | 23010047 | chr2L | 21913327..21913494 | 479..312 | 825 | 99.4 | Minus |
chr2L | 23010047 | chr2L | 21913785..21913884 | 128..29 | 500 | 100 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:54:43 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 13:51:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 21914266..21914749 | 960..477 | 2420 | 100 | Minus |
2L | 23513712 | 2L | 21915016..21915199 | 312..129 | 920 | 100 | Minus |
2L | 23513712 | 2L | 21914800..21914967 | 479..312 | 840 | 100 | Minus |
2L | 23513712 | 2L | 21915258..21915358 | 129..29 | 505 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:32:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 21914266..21914749 | 960..477 | 2420 | 100 | Minus |
2L | 23513712 | 2L | 21915016..21915199 | 312..129 | 920 | 100 | Minus |
2L | 23513712 | 2L | 21914800..21914967 | 479..312 | 840 | 100 | Minus |
2L | 23513712 | 2L | 21915258..21915358 | 129..29 | 505 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-16 13:51:09 has no hits.
IP08088.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 13:51:45 Download gff for
IP08088.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2L | 21912796..21913275 | 478..957 | 98 | <- | Minus |
chr2L | 21913329..21913493 | 313..477 | 99 | <- | Minus |
chr2L | 21913542..21913724 | 130..312 | 99 | <- | Minus |
chr2L | 21913784..21913886 | 27..129 | 98 | <- | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 18:03:45 Download gff for
IP08088.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31600-RA | 1..702 | 85..786 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:21:36 Download gff for
IP08088.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31600-RA | 1..702 | 85..786 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 15:11:06 Download gff for
IP08088.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31600-RA | 1..702 | 85..786 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:58:23 Download gff for
IP08088.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4793-RC | 2570..2589 | 462..481 | 95 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:20:26 Download gff for
IP08088.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31600-RA | 1..702 | 85..786 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-09 11:32:38 Download gff for
IP08088.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31600-RA | 1..702 | 85..786 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:21:36 Download gff for
IP08088.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31600-RA | 1..929 | 29..957 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:11:06 Download gff for
IP08088.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31600-RA | 1..929 | 29..957 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:58:24 Download gff for
IP08088.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31600-RA | 1..702 | 201..902 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:20:26 Download gff for
IP08088.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31600-RA | 1..929 | 29..957 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:51:45 Download gff for
IP08088.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 21914269..21914748 | 478..957 | 100 | <- | Minus |
2L | 21914802..21914966 | 313..477 | 100 | <- | Minus |
2L | 21915016..21915198 | 130..312 | 100 | <- | Minus |
2L | 21915258..21915360 | 27..129 | 99 | <- | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:51:45 Download gff for
IP08088.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 21914269..21914748 | 478..957 | 100 | <- | Minus |
2L | 21914802..21914966 | 313..477 | 100 | <- | Minus |
2L | 21915016..21915198 | 130..312 | 100 | <- | Minus |
2L | 21915258..21915360 | 27..129 | 99 | <- | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:51:45 Download gff for
IP08088.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 21914269..21914748 | 478..957 | 100 | <- | Minus |
2L | 21914802..21914966 | 313..477 | 100 | <- | Minus |
2L | 21915016..21915198 | 130..312 | 100 | <- | Minus |
2L | 21915258..21915360 | 27..129 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:11:06 Download gff for
IP08088.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 21914269..21914748 | 478..957 | 100 | <- | Minus |
arm_2L | 21914802..21914966 | 313..477 | 100 | <- | Minus |
arm_2L | 21915016..21915198 | 130..312 | 100 | <- | Minus |
arm_2L | 21915258..21915360 | 27..129 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:53:14 Download gff for
IP08088.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 21915258..21915360 | 27..129 | 99 | <- | Minus |
2L | 21914269..21914748 | 478..957 | 100 | <- | Minus |
2L | 21914802..21914966 | 313..477 | 100 | <- | Minus |
2L | 21915016..21915198 | 130..312 | 100 | <- | Minus |
IP08088.hyp Sequence
Translation from 84 to 785
> IP08088.hyp
MVEGMIKKLTAILFGLVLAVLFRVIIPFTLRLKSAEITINVLNCFNFLTS
TVSITICLNLVSLYLANLRDDWLVLGLIPLQILVLHWTYFTISKQLEAMN
RSYSTFMDSLNLKWLAYSNFNETDWPSIENAVLCCGLEGPRSYMDYLQGV
PTHCYHPDLITQGCSDFVKNIFMPIQHISHLQLRLAIFVELVILLILAAT
LLKKCISLIGERKHKRVITHGLAVLIDLVKNTF*
IP08088.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 11:48:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31600-PA | 233 | CG31600-PA | 1..233 | 1..233 | 1201 | 100 | Plus |
CG31600-PB | 228 | CG31600-PB | 1..228 | 1..233 | 1161 | 97.9 | Plus |
IP08088.pep Sequence
Translation from 84 to 785
> IP08088.pep
MVEGMIKKLTAILFGLVLAVLFRVIIPFTLRLKSAEITINVLNCFNFLTS
TVSITICLNLVSLYLANLRDDWLVLGLIPLQILVLHWTYFTISKQLEAMN
RSYSTFMDSLNLKWLAYSNFNETDWPSIENAVLCCGLEGPRSYMDYLQGV
PTHCYHPDLITQGCSDFVKNIFMPIQHISHLQLRLAIFVELVILLILAAT
LLKKCISLIGERKHKRVITHGLAVLIDLVKNTF*
IP08088.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 15:59:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF20039-PA | 212 | GF20039-PA | 1..207 | 16..216 | 332 | 30.9 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 15:59:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG21473-PA | 229 | GG21473-PA | 1..229 | 1..233 | 833 | 68.2 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:25:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31600-PA | 233 | CG31600-PA | 1..233 | 1..233 | 1201 | 100 | Plus |
CG31600-PB | 228 | CG31600-PB | 1..228 | 1..233 | 1161 | 97.9 | Plus |
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 15:59:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dmoj\GI24541-PA | 207 | GI24541-PA | 1..195 | 1..191 | 203 | 29 | Plus |
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 15:59:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dper\GL26120-PA | 236 | GL26120-PA | 25..226 | 14..213 | 307 | 37.3 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 15:59:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA16332-PB | 236 | GA16332-PB | 25..226 | 14..213 | 303 | 36.8 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 15:59:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM16124-PA | 233 | GM16124-PA | 1..233 | 1..233 | 1096 | 93.6 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 15:59:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD21625-PA | 233 | GD21625-PA | 1..233 | 1..233 | 1078 | 92.7 | Plus |
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 15:59:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\GJ17153-PA | 175 | GJ17153-PA | 2..149 | 78..224 | 187 | 31.5 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 15:59:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE12975-PA | 233 | GE12975-PA | 1..233 | 1..233 | 861 | 71.2 | Plus |