Clone IP08261 Report

Search the DGRC for IP08261

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:82
Well:61
Vector:pOT2
Associated Gene/TranscriptCG2022-RB
Protein status:IP08261.pep: gold
Preliminary Size:645
Sequenced Size:918

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG2022 2005-01-01 Successful iPCR screen
CG2022 2008-04-29 Release 5.5 accounting
CG2022 2008-08-15 Release 5.9 accounting
CG2022 2008-12-18 5.12 accounting

Clone Sequence Records

IP08261.complete Sequence

918 bp (918 high quality bases) assembled on 2005-03-06

GenBank Submission: BT022327

> IP08261.complete
CTCGCGAATCGTCGCGAGCATTTTCGAATAAATTTCTGTTCAGGAACGGA
GTGCGAGGAATTTCCGCGGAAATCATCGGCGTGTGTTTATAGCACTTTTG
TGGAAGTGAAACTATCACTGACATTCGACGAGATCATCACAAGAGACCGT
TGAAAATGTTTCGTAGCTTGGTGAATATTACAAGCAAATACAAAGTCCTA
CGCGGCATGATATCGTATGGCACCCTCTGGCCCTGCGGCTCCCTCATCGA
GCAGACCATGATCGAGAAGAAGACATTCCGGACGTACGACTGGATGAAGT
GCCTTAGGTTCAGCTTATTCGGCTTCTTCTTTATGGGGCCCACCATATAT
GTGTGGATCAGATTGGCCAGCGTTATGTGGCCGCGCACCGACATTAAGTC
ATCGCTCTGCAAGGCGATCACCGAGCAGACCGCTTATGATCCGATGGCCA
TCAGCTCGTTCCTCTTCTTCATGACCTTGATGGAGGGCAACTCGTACGCG
GAGGCCAAGCGGGAGGTCAGCGATAAATTCCTGGACGCCTACAAGGTGGG
CGTTATTTATTGGCCCTGCGTGCAGACGGTGAACTTCGCCTTTGTTCCGG
CGCGAAACCAGGTCGTGTTTACCTCCTTCTTCAGCATGTGCTGGACCACC
TTCCTGGCCTACGTCAAGTTCCTGCAGCTGCACCCTCCCGTCGATGTGGA
CCACCACGCCCTGGACATCCACTTCCTGGAGATGTGATTCTGGGTCGACC
CGCGACTAGTTACCCCCAAATGCGATGGCACCAAAAAGCACGCCCTTGGC
CGGAGTTAATGACATGTCATTTCTTTTGTATATATTTTGTGGGCCGATAA
CTGCGCATAGAGACCCATTTATTTTTTGCTGATATATAAGTTTTGATAAG
TTAAAAAAAAAAAAAAAA

IP08261.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:48:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG2022-RB 1008 CG2022-RB 102..1003 1..902 4510 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 19:24:55
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 812181..812569 902..514 1945 100 Minus
chr3R 27901430 chr3R 814217..814447 309..79 1155 100 Minus
chr3R 27901430 chr3R 813930..814141 517..306 1060 100 Minus
chr3R 27901430 chr3R 836634..836712 79..1 395 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:55:22 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 19:24:53
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 4986500..4986888 902..514 1945 100 Minus
3R 32079331 3R 4988536..4988766 309..79 1155 100 Minus
3R 32079331 3R 4988249..4988460 517..306 1060 100 Minus
3R 32079331 3R 5010953..5011031 79..1 395 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:38:09
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 4727331..4727719 902..514 1945 100 Minus
3R 31820162 3R 4729367..4729597 309..79 1155 100 Minus
3R 31820162 3R 4729080..4729291 517..306 1060 100 Minus
3R 31820162 3R 4751784..4751862 79..1 395 100 Minus
Blast to na_te.dros performed on 2019-03-15 19:24:54 has no hits.

IP08261.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 19:25:40 Download gff for IP08261.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 812181..812567 516..902 100 <- Minus
chr3R 813932..814139 308..515 100 <- Minus
chr3R 814219..814446 80..307 100 <- Minus
chr3R 836634..836712 1..79 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:45:33 Download gff for IP08261.complete
Subject Subject Range Query Range Percent Splice Strand
CG2022-RA 1..582 156..737 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:18:55 Download gff for IP08261.complete
Subject Subject Range Query Range Percent Splice Strand
CG2022-RB 1..582 156..737 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:50:45 Download gff for IP08261.complete
Subject Subject Range Query Range Percent Splice Strand
CG2022-RB 1..582 156..737 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:03:10 Download gff for IP08261.complete
Subject Subject Range Query Range Percent Splice Strand
CG2022-RA 1..582 156..737 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:17:39 Download gff for IP08261.complete
Subject Subject Range Query Range Percent Splice Strand
CG2022-RB 1..582 156..737 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:45:32 Download gff for IP08261.complete
Subject Subject Range Query Range Percent Splice Strand
CG2022-RA 1..902 1..902 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:18:55 Download gff for IP08261.complete
Subject Subject Range Query Range Percent Splice Strand
CG2022-RB 1..902 1..902 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:50:45 Download gff for IP08261.complete
Subject Subject Range Query Range Percent Splice Strand
CG2022-RB 1..902 1..902 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:03:10 Download gff for IP08261.complete
Subject Subject Range Query Range Percent Splice Strand
CG2022-RA 1..645 93..737 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:17:39 Download gff for IP08261.complete
Subject Subject Range Query Range Percent Splice Strand
CG2022-RB 1..902 1..902 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:25:40 Download gff for IP08261.complete
Subject Subject Range Query Range Percent Splice Strand
3R 4988538..4988765 80..307 100 <- Minus
3R 5010953..5011031 1..79 100   Minus
3R 4988251..4988458 308..515 100 <- Minus
3R 4986500..4986886 516..902 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:25:40 Download gff for IP08261.complete
Subject Subject Range Query Range Percent Splice Strand
3R 4988538..4988765 80..307 100 <- Minus
3R 5010953..5011031 1..79 100   Minus
3R 4988251..4988458 308..515 100 <- Minus
3R 4986500..4986886 516..902 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:25:40 Download gff for IP08261.complete
Subject Subject Range Query Range Percent Splice Strand
3R 4988538..4988765 80..307 100 <- Minus
3R 5010953..5011031 1..79 100   Minus
3R 4988251..4988458 308..515 100 <- Minus
3R 4986500..4986886 516..902 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:50:45 Download gff for IP08261.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 812222..812608 516..902 100 <- Minus
arm_3R 813973..814180 308..515 100 <- Minus
arm_3R 814260..814487 80..307 100 <- Minus
arm_3R 836675..836753 1..79 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:39:08 Download gff for IP08261.complete
Subject Subject Range Query Range Percent Splice Strand
3R 4727331..4727717 516..902 100 <- Minus
3R 4729082..4729289 308..515 100 <- Minus
3R 4729369..4729596 80..307 100 <- Minus
3R 4751784..4751862 1..79 100   Minus

IP08261.hyp Sequence

Translation from 155 to 736

> IP08261.hyp
MFRSLVNITSKYKVLRGMISYGTLWPCGSLIEQTMIEKKTFRTYDWMKCL
RFSLFGFFFMGPTIYVWIRLASVMWPRTDIKSSLCKAITEQTAYDPMAIS
SFLFFMTLMEGNSYAEAKREVSDKFLDAYKVGVIYWPCVQTVNFAFVPAR
NQVVFTSFFSMCWTTFLAYVKFLQLHPPVDVDHHALDIHFLEM*

IP08261.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 11:50:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG2022-PB 193 CG2022-PB 1..193 1..193 1038 100 Plus
CG14778-PA 186 CG14778-PA 15..180 10..176 453 46.7 Plus
CG14777-PF 196 CG14777-PF 23..181 12..171 434 47.5 Plus
CG14777-PC 196 CG14777-PC 23..181 12..171 434 47.5 Plus
CG14777-PE 196 CG14777-PE 23..181 12..171 434 47.5 Plus

IP08261.pep Sequence

Translation from 155 to 736

> IP08261.pep
MFRSLVNITSKYKVLRGMISYGTLWPCGSLIEQTMIEKKTFRTYDWMKCL
RFSLFGFFFMGPTIYVWIRLASVMWPRTDIKSSLCKAITEQTAYDPMAIS
SFLFFMTLMEGNSYAEAKREVSDKFLDAYKVGVIYWPCVQTVNFAFVPAR
NQVVFTSFFSMCWTTFLAYVKFLQLHPPVDVDHHALDIHFLEM*

IP08261.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 16:31:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF16076-PA 176 GF16076-PA 1..175 18..192 813 87.4 Plus
Dana\GF20999-PA 186 GF20999-PA 10..180 2..176 463 48.6 Plus
Dana\GF20998-PA 194 GF20998-PA 25..191 12..179 426 45.8 Plus
Dana\GF20925-PA 167 GF20925-PA 11..162 19..168 178 23.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 16:31:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG11233-PA 193 GG11233-PA 1..193 1..193 1025 98.4 Plus
Dere\GG12858-PA 186 GG12858-PA 15..180 10..176 453 47.3 Plus
Dere\GG12857-PA 196 GG12857-PA 23..181 12..171 435 47.5 Plus
Dere\GG16424-PA 168 GG16424-PA 8..165 15..170 164 22.8 Plus
Dere\GG14244-PA 202 GG14244-PA 39..200 10..172 146 24.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 16:31:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH22820-PA 193 GH22820-PA 1..193 1..193 878 87 Plus
Dgri\GH24500-PA 193 GH24500-PA 13..191 1..183 443 43.2 Plus
Dgri\GH24499-PA 203 GH24499-PA 24..201 12..186 437 44.8 Plus
Dgri\GH24679-PA 168 GH24679-PA 7..162 15..168 178 24.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:08:33
Subject Length Description Subject Range Query Range Score Percent Strand
plh-PB 193 CG2022-PB 1..193 1..193 1038 100 Plus
CG14778-PA 186 CG14778-PA 15..180 10..176 453 46.7 Plus
CG14777-PF 196 CG14777-PF 23..181 12..171 434 47.5 Plus
CG14777-PC 196 CG14777-PC 23..181 12..171 434 47.5 Plus
CG14777-PE 196 CG14777-PE 23..181 12..171 434 47.5 Plus
CG14777-PD 196 CG14777-PD 23..181 12..171 434 47.5 Plus
CG14777-PB 196 CG14777-PB 23..181 12..171 434 47.5 Plus
CG11077-PA 168 CG11077-PA 8..165 15..170 199 25.9 Plus
CG32263-PA 206 CG32263-PA 39..199 11..172 159 25.9 Plus
CG5906-PA 196 CG5906-PA 42..194 28..180 142 23.2 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 16:31:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI10222-PA 193 GI10222-PA 1..193 1..193 981 91.7 Plus
Dmoj\GI16042-PA 189 GI16042-PA 2..166 12..177 459 49.4 Plus
Dmoj\GI16043-PA 186 GI16043-PA 6..184 1..183 441 44.3 Plus
Dmoj\GI21659-PA 167 GI21659-PA 2..162 10..168 180 25.8 Plus
Dmoj\GI13797-PA 217 GI13797-PA 40..203 28..189 150 28.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 16:31:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL22208-PA 193 GL22208-PA 1..193 1..193 980 92.2 Plus
Dper\GL14257-PA 186 GL14257-PA 15..184 10..188 445 44.7 Plus
Dper\GL14256-PA 204 GL14256-PA 26..201 12..188 437 44.6 Plus
Dper\GL16018-PA 167 GL16018-PA 3..164 15..170 176 25.3 Plus
Dper\GL20995-PA 209 GL20995-PA 3..163 10..171 160 25.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 16:31:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA15190-PA 193 GA15190-PA 1..193 1..193 980 92.2 Plus
Dpse\GA13237-PA 186 GA13237-PA 15..184 10..188 446 45.3 Plus
Dpse\GA13236-PA 204 GA13236-PA 26..201 12..188 434 44.1 Plus
Dpse\GA22817-PA 167 GA22817-PA 7..164 15..170 175 24.1 Plus
Dpse\GA16798-PA 180 GA16798-PA 3..163 10..171 153 24.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 16:31:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM10665-PA 193 GM10665-PA 1..193 1..193 1028 99 Plus
Dsec\GM19142-PA 186 GM19142-PA 15..183 10..187 447 44.9 Plus
Dsec\GM19141-PA 196 GM19141-PA 23..181 12..171 431 47.5 Plus
Dsec\GM13015-PA 168 GM13015-PA 8..165 15..170 193 25.3 Plus
Dsec\GM14037-PA 205 GM14037-PA 39..205 10..178 161 25.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 16:31:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD19642-PA 193 GD19642-PA 1..193 1..193 1024 98.4 Plus
Dsim\GD24363-PA 168 GD24363-PA 8..165 15..170 192 25.3 Plus
Dsim\GD13316-PA 207 GD13316-PA 39..207 10..178 154 27.2 Plus
Dsim\GD12563-PA 205 GD12563-PA 11..192 7..187 138 24.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 16:31:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ11024-PA 193 GJ11024-PA 1..193 1..193 950 89.1 Plus
Dvir\GJ15555-PA 186 GJ15555-PA 6..184 1..183 451 44.3 Plus
Dvir\GJ15554-PA 202 GJ15554-PA 18..201 3..187 444 43.8 Plus
Dvir\GJ16017-PA 168 GJ16017-PA 7..164 15..170 176 20.3 Plus
Dvir\GJ11665-PA 192 GJ11665-PA 42..192 28..178 160 26.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 16:31:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK14294-PA 137 GK14294-PA 1..131 1..131 632 88.5 Plus
Dwil\GK10054-PA 206 GK10054-PA 18..196 3..185 451 45.4 Plus
Dwil\GK10055-PA 181 GK10055-PA 1..179 1..183 440 44.8 Plus
Dwil\GK18850-PA 168 GK18850-PA 11..162 19..168 186 23.7 Plus
Dwil\GK19158-PA 178 GK19158-PA 3..163 10..171 172 24.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 16:31:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE11128-PA 193 GE11128-PA 1..193 1..193 1014 96.9 Plus
Dyak\GE25314-PA 193 GE25314-PA 1..193 1..193 1008 96.4 Plus
Dyak\GE16689-PA 186 GE16689-PA 13..180 8..176 448 46.2 Plus
Dyak\GE16688-PA 196 GE16688-PA 23..181 12..171 442 48.1 Plus
Dyak\GE14493-PA 168 GE14493-PA 21..165 28..170 193 27.6 Plus