Clone IP08293 Report

Search the DGRC for IP08293

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:82
Well:93
Vector:pOT2
Associated Gene/TranscriptCG31882-RA
Protein status:IP08293.pep: gold
Preliminary Size:703
Sequenced Size:829

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG31882 2005-01-01 Successful iPCR screen
CG31882 2008-04-29 Release 5.5 accounting
CG31882 2008-08-15 Release 5.9 accounting
CG31882 2008-12-18 5.12 accounting

Clone Sequence Records

IP08293.complete Sequence

829 bp (829 high quality bases) assembled on 2005-01-13

GenBank Submission: BT022331

> IP08293.complete
ATTTTGAAGTGTCGCACTCCCATAAAGAACTGTTTAGCAATGTTAAATTT
AGGTAACATTAAAAATCGATCCAAATTCTATGATCAACAGGATGAAAACA
GACTCCAAAAGCGGCGCAAGAAGGGTGCTGCCCAATTGGATGCAAAACCA
TTCCCGGACGAGCCCGTAACGTCGAGTGAGGAAAGTCTATATCCTCGGGT
TAGCCGTATGCTACGTCGGATGAGCTCTTCGCTCTGGTCACGACTTTGGG
GTCTATCCAATCAATCCACTGACTCTGCCCGCCTGAAGACACATCCGAAC
GAGCTAGGCAACCAGTACCCGCCGAGGACGGATTCGGGGCAGATCCCTCT
GTGGCAGGCCAGCCCGACAGCTTATTTGGGATATCGTTTCCGATTGGGCA
GATAGATATAGGGTCCGCTTTGTGTCAATAGAAGTGGGACAGCTGAAATC
AAAGTTTGCGCCGGTCGATATTCGCCGGATCGGCTCTCTGGCGGAAACAC
TTTGGACTTCCTATTACCGCCCACCTCGTTTTCCTATTGCAGCCCGCACC
ATGACGACACTAAGTGGCATTCAAGTTGCATCCAATCCGTACCGTACCCC
GTCTTTCTGGTGTCCGCTTGCCTGGCTTGTGGTTTGCGTTTAAAGTTTAA
GTGGCGCAAAATCAGCGCTCATGCAGTGGAAGAAACTGTGCAAGTCTTAA
GCTAACGATTATAAAGTACCAAATTATAACTTTTAATGTATTTTCTATAA
ATATATTCTACTACTAATTTTTAAGTATAAAAAATGCACTTGTAATAAAT
GTAAAAAATTCAAAAAAAAAAAAAAAAAA

IP08293.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:45:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG31882-RA 834 CG31882-RA 24..834 1..811 4055 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 05:53:16
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 9623259..9624069 811..1 4055 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:55:25 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 05:53:14
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 9624451..9625262 812..1 4060 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:34:52
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 9624451..9625262 812..1 4060 100 Minus
Blast to na_te.dros performed 2019-03-16 05:53:14
Subject Length Description Subject Range Query Range Score Percent Strand
TAHRE 10463 TAHRE OSV 10463bp 10152..10207 722..779 114 69 Plus

IP08293.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 05:53:57 Download gff for IP08293.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 9623259..9624069 1..811 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:36:17 Download gff for IP08293.complete
Subject Subject Range Query Range Percent Splice Strand
CG31882-RA 1..366 40..405 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:13:50 Download gff for IP08293.complete
Subject Subject Range Query Range Percent Splice Strand
CG31882-RA 1..366 40..405 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 10:03:28 Download gff for IP08293.complete
Subject Subject Range Query Range Percent Splice Strand
CG31882-RA 1..366 40..405 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:58:20 Download gff for IP08293.complete
Subject Subject Range Query Range Percent Splice Strand
CG31882-RA 1..366 40..405 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:09:27 Download gff for IP08293.complete
Subject Subject Range Query Range Percent Splice Strand
CG31882-RA 1..366 40..405 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:10:28 Download gff for IP08293.complete
Subject Subject Range Query Range Percent Splice Strand
CG31882-RA 24..703 1..680 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:13:50 Download gff for IP08293.complete
Subject Subject Range Query Range Percent Splice Strand
CG31882-RA 24..834 1..811 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:03:28 Download gff for IP08293.complete
Subject Subject Range Query Range Percent Splice Strand
CG31882-RA 24..834 1..811 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:58:20 Download gff for IP08293.complete
Subject Subject Range Query Range Percent Splice Strand
CG31882-RA 24..703 1..680 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:09:27 Download gff for IP08293.complete
Subject Subject Range Query Range Percent Splice Strand
CG31882-RA 24..834 1..811 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:53:57 Download gff for IP08293.complete
Subject Subject Range Query Range Percent Splice Strand
2L 9624452..9625262 1..811 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:53:57 Download gff for IP08293.complete
Subject Subject Range Query Range Percent Splice Strand
2L 9624452..9625262 1..811 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:53:57 Download gff for IP08293.complete
Subject Subject Range Query Range Percent Splice Strand
2L 9624452..9625262 1..811 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:03:28 Download gff for IP08293.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 9624452..9625262 1..811 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:33:49 Download gff for IP08293.complete
Subject Subject Range Query Range Percent Splice Strand
2L 9624452..9625262 1..811 100   Minus

IP08293.hyp Sequence

Translation from 0 to 404

> IP08293.hyp
ILKCRTPIKNCLAMLNLGNIKNRSKFYDQQDENRLQKRRKKGAAQLDAKP
FPDEPVTSSEESLYPRVSRMLRRMSSSLWSRLWGLSNQSTDSARLKTHPN
ELGNQYPPRTDSGQIPLWQASPTAYLGYRFRLGR*

IP08293.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 11:51:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG31882-PA 121 CG31882-PA 1..121 14..134 639 100 Plus

IP08293.pep Sequence

Translation from 0 to 404

> IP08293.pep
ILKCRTPIKNCLAMLNLGNIKNRSKFYDQQDENRLQKRRKKGAAQLDAKP
FPDEPVTSSEESLYPRVSRMLRRMSSSLWSRLWGLSNQSTDSARLKTHPN
ELGNQYPPRTDSGQIPLWQASPTAYLGYRFRLGR*

IP08293.pep Blast Records

Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 16:01:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24017-PA 126 GG24017-PA 1..125 14..132 308 56 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:27:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG31882-PA 121 CG31882-PA 1..121 14..134 639 100 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 16:01:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM12363-PA 121 GM12363-PA 1..121 14..134 469 76 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 16:01:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22346-PA 121 GD22346-PA 1..121 14..134 490 78.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 16:01:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE10435-PA 121 GE10435-PA 1..121 14..134 391 67.8 Plus