IP08293.complete Sequence
829 bp (829 high quality bases) assembled on 2005-01-13
GenBank Submission: BT022331
> IP08293.complete
ATTTTGAAGTGTCGCACTCCCATAAAGAACTGTTTAGCAATGTTAAATTT
AGGTAACATTAAAAATCGATCCAAATTCTATGATCAACAGGATGAAAACA
GACTCCAAAAGCGGCGCAAGAAGGGTGCTGCCCAATTGGATGCAAAACCA
TTCCCGGACGAGCCCGTAACGTCGAGTGAGGAAAGTCTATATCCTCGGGT
TAGCCGTATGCTACGTCGGATGAGCTCTTCGCTCTGGTCACGACTTTGGG
GTCTATCCAATCAATCCACTGACTCTGCCCGCCTGAAGACACATCCGAAC
GAGCTAGGCAACCAGTACCCGCCGAGGACGGATTCGGGGCAGATCCCTCT
GTGGCAGGCCAGCCCGACAGCTTATTTGGGATATCGTTTCCGATTGGGCA
GATAGATATAGGGTCCGCTTTGTGTCAATAGAAGTGGGACAGCTGAAATC
AAAGTTTGCGCCGGTCGATATTCGCCGGATCGGCTCTCTGGCGGAAACAC
TTTGGACTTCCTATTACCGCCCACCTCGTTTTCCTATTGCAGCCCGCACC
ATGACGACACTAAGTGGCATTCAAGTTGCATCCAATCCGTACCGTACCCC
GTCTTTCTGGTGTCCGCTTGCCTGGCTTGTGGTTTGCGTTTAAAGTTTAA
GTGGCGCAAAATCAGCGCTCATGCAGTGGAAGAAACTGTGCAAGTCTTAA
GCTAACGATTATAAAGTACCAAATTATAACTTTTAATGTATTTTCTATAA
ATATATTCTACTACTAATTTTTAAGTATAAAAAATGCACTTGTAATAAAT
GTAAAAAATTCAAAAAAAAAAAAAAAAAA
IP08293.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 17:45:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31882-RA | 834 | CG31882-RA | 24..834 | 1..811 | 4055 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 05:53:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2L | 23010047 | chr2L | 9623259..9624069 | 811..1 | 4055 | 100 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:55:25 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 05:53:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 9624451..9625262 | 812..1 | 4060 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:34:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 9624451..9625262 | 812..1 | 4060 | 100 | Minus |
Blast to na_te.dros performed 2019-03-16 05:53:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
TAHRE | 10463 | TAHRE OSV 10463bp | 10152..10207 | 722..779 | 114 | 69 | Plus |
IP08293.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 05:53:57 Download gff for
IP08293.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2L | 9623259..9624069 | 1..811 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:36:17 Download gff for
IP08293.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31882-RA | 1..366 | 40..405 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:13:50 Download gff for
IP08293.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31882-RA | 1..366 | 40..405 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 10:03:28 Download gff for
IP08293.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31882-RA | 1..366 | 40..405 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:58:20 Download gff for
IP08293.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31882-RA | 1..366 | 40..405 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:09:27 Download gff for
IP08293.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31882-RA | 1..366 | 40..405 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:10:28 Download gff for
IP08293.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31882-RA | 24..703 | 1..680 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:13:50 Download gff for
IP08293.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31882-RA | 24..834 | 1..811 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:03:28 Download gff for
IP08293.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31882-RA | 24..834 | 1..811 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:58:20 Download gff for
IP08293.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31882-RA | 24..703 | 1..680 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:09:27 Download gff for
IP08293.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31882-RA | 24..834 | 1..811 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:53:57 Download gff for
IP08293.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 9624452..9625262 | 1..811 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:53:57 Download gff for
IP08293.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 9624452..9625262 | 1..811 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:53:57 Download gff for
IP08293.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 9624452..9625262 | 1..811 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:03:28 Download gff for
IP08293.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 9624452..9625262 | 1..811 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:33:49 Download gff for
IP08293.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 9624452..9625262 | 1..811 | 100 | | Minus |
IP08293.hyp Sequence
Translation from 0 to 404
> IP08293.hyp
ILKCRTPIKNCLAMLNLGNIKNRSKFYDQQDENRLQKRRKKGAAQLDAKP
FPDEPVTSSEESLYPRVSRMLRRMSSSLWSRLWGLSNQSTDSARLKTHPN
ELGNQYPPRTDSGQIPLWQASPTAYLGYRFRLGR*
IP08293.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 11:51:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31882-PA | 121 | CG31882-PA | 1..121 | 14..134 | 639 | 100 | Plus |
IP08293.pep Sequence
Translation from 0 to 404
> IP08293.pep
ILKCRTPIKNCLAMLNLGNIKNRSKFYDQQDENRLQKRRKKGAAQLDAKP
FPDEPVTSSEESLYPRVSRMLRRMSSSLWSRLWGLSNQSTDSARLKTHPN
ELGNQYPPRTDSGQIPLWQASPTAYLGYRFRLGR*
IP08293.pep Blast Records
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 16:01:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG24017-PA | 126 | GG24017-PA | 1..125 | 14..132 | 308 | 56 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:27:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31882-PA | 121 | CG31882-PA | 1..121 | 14..134 | 639 | 100 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 16:01:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM12363-PA | 121 | GM12363-PA | 1..121 | 14..134 | 469 | 76 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 16:01:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD22346-PA | 121 | GD22346-PA | 1..121 | 14..134 | 490 | 78.5 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 16:01:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE10435-PA | 121 | GE10435-PA | 1..121 | 14..134 | 391 | 67.8 | Plus |