Clone IP08370 Report

Search the DGRC for IP08370

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:83
Well:70
Vector:pOT2
Associated Gene/TranscriptCG30280-RB
Protein status:IP08370.pep: gold
Preliminary Size:736
Sequenced Size:1094

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG30280 2005-01-01 Successful iPCR screen
CG30280 2008-04-29 Release 5.5 accounting
CG30280 2008-08-15 Release 5.9 accounting
CG30280 2008-12-18 5.12 accounting

Clone Sequence Records

IP08370.complete Sequence

1094 bp (1094 high quality bases) assembled on 2005-03-06

GenBank Submission: BT022914

> IP08370.complete
ACAAAATCATGTTTCCCGGCGTCCCAGTTTTTTCCGTTTGCATTGCACTT
AGTGTGATGATTTTTTGTCATGCGGAGACGCTGAATTTGTTTGGAAACTT
GGAGGCTATTTATGAACAGGCAGAAAATGCACTCTCAACTTTACAAGAAT
CACTTTTGCAACTTGAAACCAATGGCACTCTAAACACATCCCCTGATGTG
ATTTATCCAACTTCCTGTCTGACTTCTGGGGATCTTGAAAATGGCTTGCA
CACCCTGAAAGTTCCAGGCTTGAGTCCCTTTCAAGTGTATTGCGAAAATC
AGTTGGCTGGACCCGGTTGGATTGTAATTCAAAAGAGGTTCAGTGGAAAT
CTGAGCTTCTTTCGCAATTGGAAGGAGTACAAGAACGGATTCGGCAATCT
AATGGACGAGTACTTCCTCGGCCTCGAAAAGATTCGTGCCTTGACTGCCC
TGGAGCCGCATGAGTTGTATGTACACCTGGAGGATTTCGATGATACAATT
AAGCATGCGAAATTCGATGAATTTGCCATTGGAAACGAAGATGACGACTA
CGCCATGAATACACTGGGAAAATATTCGGGCACTGCGGGAGATTCCCTCC
GCTCACACCGCAAAATGAAGTTCTCCACATATGATCGGGATAACGATCAT
GAGTTTAATAAGAACTGTGCATTTTACTATCTGGGAGGATGGTGGTACAA
CGCATGTCTGGACAGCAACCTTAATGGTCAGTATATGCCGGGTGGGAAAT
ACGAGGAGAGCTTGTTCGCCAGAGGAATGTGCTGGCGATCTTGGCGTGGC
CACAACTACGGATACAGGGTAACCCAAATGATGATAAGACCCAAGTGCCG
AATGATACCAGTGACTCAGCGGTGAATTTGGGCAAGGCGGTTTCACGAAT
ATTGTTATTATTATTAGCTGTTCACTCCCTGTTGGTTTCAATGGCTTCGA
GAACGTGAAAACAATTTGTTATGTACTTGATTAATATGCAAAGGTTGTTC
CATTGAATCATCGCATTCTCGCCGAGCACATTAATCAGAATCTCAATTAG
AACTGCGAAATATACTGTAATTCTCAAAAAAAAAAAAAAAAAAA

IP08370.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:48:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG30280-RB 1075 CG30280-RB 1..1075 1..1075 5375 100 Plus
CG30280-RC 752 CG30280-RC 1..715 1..715 3575 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 15:30:16
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 18000280..18000855 140..715 2880 100 Plus
chr2R 21145070 chr2R 18000916..18001277 714..1075 1720 98.3 Plus
chr2R 21145070 chr2R 18000025..18000101 1..77 385 100 Plus
chr2R 21145070 chr2R 18000165..18000228 76..139 320 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:55:38 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 15:30:13
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 22113844..22114419 140..715 2880 100 Plus
2R 25286936 2R 22114480..22114842 714..1076 1815 100 Plus
2R 25286936 2R 22113589..22113665 1..77 385 100 Plus
2R 25286936 2R 22113729..22113792 76..139 320 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:38:03
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 22115043..22115618 140..715 2880 100 Plus
2R 25260384 2R 22115679..22116041 714..1076 1815 100 Plus
2R 25260384 2R 22114788..22114864 1..77 385 100 Plus
2R 25260384 2R 22114928..22114991 76..139 320 100 Plus
Blast to na_te.dros performed on 2019-03-15 15:30:14 has no hits.

IP08370.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 15:30:57 Download gff for IP08370.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 18000025..18000101 1..77 100 -> Plus
chr2R 18000167..18000228 78..139 100 -> Plus
chr2R 18000280..18000855 140..715 100 -> Plus
chr2R 18000918..18001277 716..1075 98   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:36:27 Download gff for IP08370.complete
Subject Subject Range Query Range Percent Splice Strand
CG30280-RA 1..867 9..875 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:18:45 Download gff for IP08370.complete
Subject Subject Range Query Range Percent Splice Strand
CG30280-RB 1..819 57..875 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 01:30:54 Download gff for IP08370.complete
Subject Subject Range Query Range Percent Splice Strand
CG30280-RB 1..819 57..875 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:02:59 Download gff for IP08370.complete
Subject Subject Range Query Range Percent Splice Strand
CG30280-RA 1..867 9..875 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:08:27 Download gff for IP08370.complete
Subject Subject Range Query Range Percent Splice Strand
CG30280-RB 1..819 57..875 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:18:48 Download gff for IP08370.complete
Subject Subject Range Query Range Percent Splice Strand
CG30280-RA 1..1070 6..1075 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:18:45 Download gff for IP08370.complete
Subject Subject Range Query Range Percent Splice Strand
CG30280-RB 1..1075 1..1075 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:30:54 Download gff for IP08370.complete
Subject Subject Range Query Range Percent Splice Strand
CG30280-RB 1..1075 1..1075 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:02:59 Download gff for IP08370.complete
Subject Subject Range Query Range Percent Splice Strand
CG30280-RA 1..1070 6..1075 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:08:27 Download gff for IP08370.complete
Subject Subject Range Query Range Percent Splice Strand
CG30280-RB 1..1075 1..1075 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:30:57 Download gff for IP08370.complete
Subject Subject Range Query Range Percent Splice Strand
2R 22113589..22113665 1..77 100 -> Plus
2R 22113731..22113792 78..139 100 -> Plus
2R 22113844..22114419 140..715 100 -> Plus
2R 22114482..22114841 716..1075 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:30:57 Download gff for IP08370.complete
Subject Subject Range Query Range Percent Splice Strand
2R 22113589..22113665 1..77 100 -> Plus
2R 22113731..22113792 78..139 100 -> Plus
2R 22113844..22114419 140..715 100 -> Plus
2R 22114482..22114841 716..1075 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:30:57 Download gff for IP08370.complete
Subject Subject Range Query Range Percent Splice Strand
2R 22113589..22113665 1..77 100 -> Plus
2R 22113731..22113792 78..139 100 -> Plus
2R 22113844..22114419 140..715 100 -> Plus
2R 22114482..22114841 716..1075 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:30:54 Download gff for IP08370.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 18001094..18001170 1..77 100 -> Plus
arm_2R 18001236..18001297 78..139 100 -> Plus
arm_2R 18001349..18001924 140..715 100 -> Plus
arm_2R 18001987..18002346 716..1075 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:38:58 Download gff for IP08370.complete
Subject Subject Range Query Range Percent Splice Strand
2R 22115043..22115618 140..715 100 -> Plus
2R 22115681..22116040 716..1075 100   Plus
2R 22114788..22114864 1..77 100 -> Plus
2R 22114930..22114991 78..139 100 -> Plus

IP08370.hyp Sequence

Translation from 2 to 874

> IP08370.hyp
KIMFPGVPVFSVCIALSVMIFCHAETLNLFGNLEAIYEQAENALSTLQES
LLQLETNGTLNTSPDVIYPTSCLTSGDLENGLHTLKVPGLSPFQVYCENQ
LAGPGWIVIQKRFSGNLSFFRNWKEYKNGFGNLMDEYFLGLEKIRALTAL
EPHELYVHLEDFDDTIKHAKFDEFAIGNEDDDYAMNTLGKYSGTAGDSLR
SHRKMKFSTYDRDNDHEFNKNCAFYYLGGWWYNACLDSNLNGQYMPGGKY
EESLFARGMCWRSWRGHNYGYRVTQMMIRPKCRMIPVTQR*

IP08370.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 11:51:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG30280-PB 272 CG30280-PB 1..272 19..290 1496 100 Plus
CG30280-PC 220 CG30280-PC 1..219 19..237 1194 100 Plus
CG30281-PA 291 CG30281-PA 25..275 33..282 704 49.6 Plus
CG9500-PA 272 CG9500-PA 17..268 25..282 584 44.7 Plus
CG5550-PA 246 CG5550-PA 35..246 68..281 516 42.5 Plus

IP08370.pep Sequence

Translation from 8 to 874

> IP08370.pep
MFPGVPVFSVCIALSVMIFCHAETLNLFGNLEAIYEQAENALSTLQESLL
QLETNGTLNTSPDVIYPTSCLTSGDLENGLHTLKVPGLSPFQVYCENQLA
GPGWIVIQKRFSGNLSFFRNWKEYKNGFGNLMDEYFLGLEKIRALTALEP
HELYVHLEDFDDTIKHAKFDEFAIGNEDDDYAMNTLGKYSGTAGDSLRSH
RKMKFSTYDRDNDHEFNKNCAFYYLGGWWYNACLDSNLNGQYMPGGKYEE
SLFARGMCWRSWRGHNYGYRVTQMMIRPKCRMIPVTQR*

IP08370.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 16:30:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF19835-PA 256 GF19835-PA 1..255 24..287 1066 73.1 Plus
Dana\GF13288-PA 288 GF13288-PA 24..274 32..280 679 50 Plus
Dana\GF12980-PA 268 GF12980-PA 6..264 30..279 571 43.9 Plus
Dana\GF12978-PA 248 GF12978-PA 21..244 58..279 531 46.5 Plus
Dana\GF12979-PA 224 GF12979-PA 7..219 31..235 493 44.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 16:30:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22161-PA 288 GG22161-PA 1..288 1..288 1429 90.3 Plus
Dere\GG22162-PA 291 GG22162-PA 23..275 30..280 713 50 Plus
Dere\GG23629-PA 277 GG23629-PA 13..273 21..280 564 42.7 Plus
Dere\GG20632-PA 246 GG20632-PA 35..246 66..279 511 42.5 Plus
Dere\GG10629-PA 417 GG10629-PA 195..404 68..282 497 44.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 16:30:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH20551-PA 273 GH20551-PA 2..267 24..281 701 47.2 Plus
Dgri\GH20550-PA 178 GH20550-PA 2..161 127..286 683 73.8 Plus
Dgri\GH20745-PA 242 GH20745-PA 23..240 59..278 622 51.4 Plus
Dgri\GH13721-PA 331 GH13721-PA 56..330 8..283 543 40.5 Plus
Dgri\GH21158-PA 243 GH21158-PA 23..243 58..280 530 44.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:10:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG30280-PD 288 CG30280-PD 1..288 1..288 1578 100 Plus
CG30281-PA 291 CG30281-PA 25..275 31..280 704 49.6 Plus
CG9500-PB 292 CG9500-PB 37..288 23..280 584 44.7 Plus
CG8642-PB 429 CG8642-PB 207..416 68..282 517 45.4 Plus
CG5550-PA 246 CG5550-PA 35..246 66..279 516 42.5 Plus
CG5550-PB 250 CG5550-PB 35..250 66..279 501 41.7 Plus
CG6788-PA 358 CG6788-PA 104..356 27..279 472 36.7 Plus
CG31832-PB 227 CG31832-PB 31..225 78..279 447 43.6 Plus
CG1791-PC 333 CG1791-PC 112..329 58..278 383 37.8 Plus
CG1791-PA 334 CG1791-PA 113..330 58..278 383 37.8 Plus
CG1791-PB 195 CG1791-PB 1..191 88..278 373 39.2 Plus
CG1889-PC 332 CG1889-PC 105..332 51..282 369 34.9 Plus
CG1889-PA 332 CG1889-PA 105..332 51..282 369 34.9 Plus
CG1889-PD 338 CG1889-PD 111..338 51..282 369 34.9 Plus
CG10359-PG 459 CG10359-PG 243..449 67..278 354 38.2 Plus
CG10359-PE 485 CG10359-PE 269..475 67..278 354 38.2 Plus
CG41520-PD 627 CG41520-PD 403..615 71..279 343 36.7 Plus
CG41520-PA 745 CG41520-PA 521..733 71..279 343 36.7 Plus
CG41520-PB 729 CG41520-PB 521..717 71..279 314 34.9 Plus
CG9593-PB 382 CG9593-PB 183..370 91..278 310 32.6 Plus
sca-PB 799 CG17579-PB 500..712 30..245 282 32.4 Plus
sca-PA 799 CG17579-PA 500..712 30..245 282 32.4 Plus
CG7668-PC 422 CG7668-PC 241..420 85..278 259 34.8 Plus
CG7668-PA 422 CG7668-PA 241..420 85..278 259 34.8 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 16:30:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI18819-PA 214 GI18819-PA 1..201 88..288 823 70.6 Plus
Dmoj\GI18820-PA 211 GI18820-PA 5..205 78..281 641 54.4 Plus
Dmoj\GI20830-PA 239 GI20830-PA 27..237 66..278 621 52.6 Plus
Dmoj\GI18379-PA 330 GI18379-PA 71..326 31..278 575 45 Plus
Dmoj\GI21406-PA 397 GI21406-PA 158..392 37..279 559 46.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 16:30:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL11775-PA 220 GL11775-PA 19..213 22..235 670 61.2 Plus
Dper\GL11776-PA 236 GL11776-PA 2..219 60..280 664 52.5 Plus
Dper\GL26064-PA 458 GL26064-PA 194..447 28..279 552 43 Plus
Dper\GL25703-PA 356 GL25703-PA 114..354 31..279 530 43.7 Plus
Dper\GL25691-PA 472 GL25691-PA 277..471 80..280 526 48.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 16:30:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA24068-PA 281 GA24068-PA 19..279 22..284 1041 71.9 Plus
Dpse\GA15749-PA 293 GA15749-PA 6..276 12..280 687 45.6 Plus
Dpse\GA25261-PA 262 GA25261-PA 1..252 31..280 557 44.1 Plus
Dpse\GA25394-PA 281 GA25394-PA 86..280 80..280 525 48.8 Plus
Dpse\GA25399-PA 201 GA25399-PA 1..200 79..280 516 48.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 16:30:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM15881-PA 288 GM15881-PA 1..288 1..288 1508 95.8 Plus
Dsec\GM15883-PA 292 GM15883-PA 24..276 30..280 706 51.6 Plus
Dsec\GM17946-PA 293 GM17946-PA 22..289 14..280 576 42.8 Plus
Dsec\GM21726-PA 246 GM21726-PA 18..246 49..279 510 40.7 Plus
Dsec\GM20674-PA 418 GM20674-PA 196..405 68..282 510 45.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 16:30:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD11644-PA 288 GD11644-PA 1..288 1..288 1509 96.2 Plus
Dsim\GD11645-PA 292 GD11645-PA 1..276 5..280 713 47.3 Plus
Dsim\GD22585-PA 292 GD22585-PA 41..288 27..280 583 45.7 Plus
Dsim\GD11221-PA 246 GD11221-PA 18..246 49..279 510 40.7 Plus
Dsim\GD17373-PA 358 GD17373-PA 152..356 69..279 470 43.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 16:30:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ21846-PA 238 GJ21846-PA 3..223 66..286 894 69.7 Plus
Dvir\GJ21847-PA 226 GJ21847-PA 8..220 66..281 685 55.6 Plus
Dvir\GJ20563-PA 242 GJ20563-PA 23..240 59..278 637 51.8 Plus
Dvir\GJ12860-PA 287 GJ12860-PA 81..281 78..280 636 56.2 Plus
Dvir\GJ23826-PA 241 GJ23826-PA 30..241 66..279 598 49.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 16:30:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK19386-PA 223 GK19386-PA 2..223 67..288 902 70.3 Plus
Dwil\GK20369-PA 234 GK20369-PA 7..229 56..279 727 57.1 Plus
Dwil\GK21394-PA 313 GK21394-PA 6..273 14..280 709 49.3 Plus
Dwil\GK22020-PA 249 GK22020-PA 14..249 42..279 608 48.5 Plus
Dwil\GK15354-PA 258 GK15354-PA 55..256 79..281 588 51.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 16:30:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12241-PA 288 GE12241-PA 1..288 1..288 1449 92.4 Plus
Dyak\GE12242-PA 288 GE12242-PA 24..276 30..280 708 49.2 Plus
Dyak\GE18450-PA 249 GE18450-PA 2..245 31..280 563 45.3 Plus
Dyak\GE11822-PA 246 GE11822-PA 18..246 49..279 509 40.7 Plus
Dyak\GE22879-PA 418 GE22879-PA 197..406 68..282 507 45.2 Plus