Clone IP08372 Report

Search the DGRC for IP08372

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:83
Well:72
Vector:pOT2
Associated Gene/TranscriptCG30383-RA
Protein status:IP08372.pep: gold
Preliminary Size:759
Sequenced Size:1002

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG30383 2005-01-01 Successful iPCR screen
CG30383 2008-04-29 Release 5.5 accounting
CG30383 2008-08-15 Release 5.9 accounting
CG30383 2008-12-18 5.12 accounting

Clone Sequence Records

IP08372.complete Sequence

1002 bp (1002 high quality bases) assembled on 2005-03-06

GenBank Submission: BT022918

> IP08372.complete
AAATGTTTTATATTGGGAATGAAAATGGACGAAACTGTGGACGAAGCGGA
ATTTAATGCCAATATCGGCCGTATTGCTCGATCTACGCTTTTGCACGATG
CTGAACAATCGATCCACAGGGAGTTGATCGACTACGCTGTTGCGTCGTGC
CGTCTGTTTTACATCCAGGATGCTTCAGCCTGGAAGGAGTGGAACACCAG
GAACGAGGCTTTCAGGGATCTCACTGCCAAGGAAGTGTGCCATTTATTCC
TAACCGAAGTTCTGCCCCAACTGGACACCTATCAGCTTTCGGAGATGGCC
CAAAAACGCCTTAAGCTTCTGGATCTGCATCCATTCTTCAGGCGCGTTGC
CCAAGGCTACCAGTACACTCCGGATTGTGACCTTGCAGCTCGATTTGTAG
TCCAGCGCCAGAAACATTTTATCCAACCTGAAGATATCAAGAAGATTAAG
AAAGGCGATTCCCTGAAAAGATGCCAAACCGTGCTCATGGAAAGCGATGA
AATGGAGCAGAAAACCTGCGTTGGGTATCGAAGCAAAGTCTCCATGGAGT
CCGCCGTTCTGTTCTCGGTACTGTTGTCCACCAACCATGAGCTTTCTATT
GGAAAGATGCTCGATATGAGTGAGATTCACGAAAGAATGCGGCGCGCCAA
ACAGTCATTCGAGGATACTGCTAGAGTTACTCCGTTCCGAACGAACATTG
ATGACCTAATCTCCGATTTGGATGTCTGTGCTAAGGTCAAATCCAAACTT
TGTCGAGTAATAAGTGATTGTAAAAAGTACTAGAAAGGATTAGCTATATC
TTTTATCTATATTTAATACTTTTATTTCATTTTAATCAATAGTATAAAAT
TATTTCTCTGGATTTTAGGTGACTATAAGAAGACTATTTTTGTAATATTT
TTGAACCATTTAAGCTCAAAATACAACTTACTATTCATATTTTAATATAT
AATTCCATGTTATCATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AA

IP08372.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:48:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG30383-RA 1068 CG30383-RA 100..1065 1..966 4830 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 06:08:39
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 3711264..3711781 966..449 2590 100 Minus
chr2R 21145070 chr2R 3712013..3712462 450..1 2250 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:55:40 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 06:08:37
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7823943..7824460 966..449 2590 100 Minus
2R 25286936 2R 7824692..7825141 450..1 2250 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:38:03
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 7825142..7825659 966..449 2590 100 Minus
2R 25260384 2R 7825891..7826340 450..1 2250 100 Minus
Blast to na_te.dros performed 2019-03-16 06:08:38
Subject Length Description Subject Range Query Range Score Percent Strand
TAHRE 10463 TAHRE OSV 10463bp 16..98 913..828 126 62.8 Minus
INE-1 611 INE-1 INE1 611bp Derived from U66884 (e1371475) (Rel. 52, Last updated, Version 6). 405..497 874..966 113 60.6 Plus

IP08372.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 06:09:42 Download gff for IP08372.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 3711264..3711779 451..966 100 <- Minus
chr2R 3712013..3712462 1..450 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:36:29 Download gff for IP08372.complete
Subject Subject Range Query Range Percent Splice Strand
CG30383-RA 1..765 19..783 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:18:47 Download gff for IP08372.complete
Subject Subject Range Query Range Percent Splice Strand
CG30383-RA 1..765 19..783 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:38:35 Download gff for IP08372.complete
Subject Subject Range Query Range Percent Splice Strand
CG30383-RA 1..765 19..783 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:03:00 Download gff for IP08372.complete
Subject Subject Range Query Range Percent Splice Strand
CG30383-RA 1..765 19..783 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:12:28 Download gff for IP08372.complete
Subject Subject Range Query Range Percent Splice Strand
CG30383-RA 1..765 19..783 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:18:49 Download gff for IP08372.complete
Subject Subject Range Query Range Percent Splice Strand
CG30383-RA 1..966 1..966 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:18:46 Download gff for IP08372.complete
Subject Subject Range Query Range Percent Splice Strand
CG30383-RA 1..966 1..966 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:38:35 Download gff for IP08372.complete
Subject Subject Range Query Range Percent Splice Strand
CG30383-RA 1..966 1..966 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:03:00 Download gff for IP08372.complete
Subject Subject Range Query Range Percent Splice Strand
CG30383-RA 1..966 1..966 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:12:28 Download gff for IP08372.complete
Subject Subject Range Query Range Percent Splice Strand
CG30383-RA 1..966 1..966 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:09:42 Download gff for IP08372.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7823943..7824458 451..966 100 <- Minus
2R 7824692..7825141 1..450 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:09:42 Download gff for IP08372.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7823943..7824458 451..966 100 <- Minus
2R 7824692..7825141 1..450 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:09:42 Download gff for IP08372.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7823943..7824458 451..966 100 <- Minus
2R 7824692..7825141 1..450 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:38:35 Download gff for IP08372.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3711448..3711963 451..966 100 <- Minus
arm_2R 3712197..3712646 1..450 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:38:59 Download gff for IP08372.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7825142..7825657 451..966 100 <- Minus
2R 7825891..7826340 1..450 100   Minus

IP08372.hyp Sequence

Translation from 0 to 782

> IP08372.hyp
KCFILGMKMDETVDEAEFNANIGRIARSTLLHDAEQSIHRELIDYAVASC
RLFYIQDASAWKEWNTRNEAFRDLTAKEVCHLFLTEVLPQLDTYQLSEMA
QKRLKLLDLHPFFRRVAQGYQYTPDCDLAARFVVQRQKHFIQPEDIKKIK
KGDSLKRCQTVLMESDEMEQKTCVGYRSKVSMESAVLFSVLLSTNHELSI
GKMLDMSEIHERMRRAKQSFEDTARVTPFRTNIDDLISDLDVCAKVKSKL
CRVISDCKKY*

IP08372.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 11:51:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG30383-PA 254 CG30383-PA 1..254 7..260 1311 100 Plus

IP08372.pep Sequence

Translation from 18 to 782

> IP08372.pep
MKMDETVDEAEFNANIGRIARSTLLHDAEQSIHRELIDYAVASCRLFYIQ
DASAWKEWNTRNEAFRDLTAKEVCHLFLTEVLPQLDTYQLSEMAQKRLKL
LDLHPFFRRVAQGYQYTPDCDLAARFVVQRQKHFIQPEDIKKIKKGDSLK
RCQTVLMESDEMEQKTCVGYRSKVSMESAVLFSVLLSTNHELSIGKMLDM
SEIHERMRRAKQSFEDTARVTPFRTNIDDLISDLDVCAKVKSKLCRVISD
CKKY*

IP08372.pep Blast Records

Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 16:31:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG10706-PA 252 GG10706-PA 1..252 3..254 1161 84.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 16:31:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16725-PA 245 GH16725-PA 1..243 3..248 391 35 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:39:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG30383-PA 254 CG30383-PA 1..254 1..254 1311 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 16:31:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI13454-PA 257 GI13454-PA 8..256 11..250 366 34 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 16:31:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL20820-PA 244 GL20820-PA 26..236 32..244 499 45.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 16:31:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA28566-PA 248 GA28566-PA 1..240 3..244 543 45 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 16:31:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM20752-PA 252 GM20752-PA 1..252 3..254 1302 96 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 16:31:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ11815-PA 261 GJ11815-PA 1..258 3..248 427 34.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 16:31:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK22526-PA 235 GK22526-PA 1..234 3..250 431 36.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 16:31:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE23585-PA 251 GE23585-PA 1..251 3..254 1124 82.9 Plus