IP08379.complete Sequence
849 bp (849 high quality bases) assembled on 2005-01-13
GenBank Submission: BT022926
> IP08379.complete
CAACAAGCCAAATCCACTCCAAAATTCTGTTTTTATACTATCAAAATTAT
AATCTTTTAAATTATTTCATAAATTAGAACATGGAATACAGCGGAGTGCG
GTTACCCGGAATTTTTTGTCCGGATGAAAGCATTGAGCAGTTTGCAAGAC
TTTACGGAAGTGATAATTTTAGCAAAATGATGATAATAGCCACGACCAGT
AGTCCTCCGAGGACTATGCAGGCCACAACTCATTCACCTCCAGGAATGAT
GGGGGGGAATCCGTCCAGGTTTCAAGGGAATGCATCAACAGCTCACGATC
GAAATCTAAAAGTTAATCACCGATATGCTCATAATGTGCAGGCCCCATCC
AATCCGCACCCGGTCATAATGGGTCCGTCCAGGTTTCATGGAAATCTACC
ACCTATTCAGGATACATATTTAAAAAGTAGTCCCCGAGATCAAGGATTTC
ATGCTTATGGGGCCGTGCATAGAGGCTGTGGTGACCACTATAGTTATTCG
GCAAATTTGCAGAACTCTAAACCTGAATATCCTACAAGGCCCGACCAATC
GGGCACACAAAATCCGGGACAAATGTACTGCAATACTCAGCACTATCAGA
ATCTGAATTTTTATCATCCACCTCCACCTGGACCCAGATTTCCCTGGCTT
TAGAGCACATTTTCCGGCCAAATCCATTTAACAATAATCAACTCGCTAGT
TTGTAAGTTTTGTTGTTAAAAGTTTATCCATGGCGTGTATTTCTATAGCG
AAATTATTGTTTGGTATCGCAATTTAGTGGTGACTGTCTAAATTATATAT
ATAACCTAAAATAATGAATGAATGCCATAATGAAAAAAAAAAAAAAAAA
IP08379.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 17:44:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31206-RA | 1123 | CG31206-RA | 150..984 | 1..835 | 4175 | 100 | Plus |
CG31206.a | 917 | CG31206.a | 394..897 | 332..835 | 2520 | 100 | Plus |
CG31206.a | 917 | CG31206.a | 39..370 | 1..332 | 1660 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-15 21:50:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3R | 27901430 | chr3R | 15930921..15931317 | 832..436 | 1985 | 100 | Minus |
chr3R | 27901430 | chr3R | 15931558..15931763 | 331..126 | 1030 | 100 | Minus |
chr3R | 27901430 | chr3R | 15931819..15931948 | 130..1 | 635 | 99.2 | Minus |
chr3R | 27901430 | chr3R | 15931381..15931485 | 436..332 | 510 | 99 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:55:42 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 21:50:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 20106933..20107332 | 835..436 | 2000 | 100 | Minus |
3R | 32079331 | 3R | 20107573..20107778 | 331..126 | 1030 | 100 | Minus |
3R | 32079331 | 3R | 20107834..20107963 | 130..1 | 635 | 99.2 | Minus |
3R | 32079331 | 3R | 20107396..20107500 | 436..332 | 525 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:34:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 31820162 | 3R | 19847764..19848163 | 835..436 | 2000 | 100 | Minus |
3R | 31820162 | 3R | 19848404..19848609 | 331..126 | 1030 | 100 | Minus |
3R | 31820162 | 3R | 19848665..19848794 | 130..1 | 635 | 99.2 | Minus |
3R | 31820162 | 3R | 19848227..19848331 | 436..332 | 525 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-15 21:50:46 has no hits.
IP08379.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 21:51:59 Download gff for
IP08379.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3R | 15930921..15931316 | 437..832 | 100 | <- | Minus |
chr3R | 15931381..15931485 | 332..436 | 99 | <- | Minus |
chr3R | 15931558..15931763 | 126..331 | 100 | <- | Minus |
chr3R | 15931824..15931948 | 1..125 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:36:30 Download gff for
IP08379.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31206-RA | 1..573 | 81..653 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:13:44 Download gff for
IP08379.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31206-RA | 1..573 | 81..653 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:00:24 Download gff for
IP08379.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31206-RA | 1..573 | 81..653 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:58:12 Download gff for
IP08379.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31206-RA | 1..573 | 81..653 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:04:41 Download gff for
IP08379.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31206-RA | 1..573 | 81..653 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:10:13 Download gff for
IP08379.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31206-RA | 39..691 | 1..653 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:13:44 Download gff for
IP08379.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31206-RA | 39..870 | 1..832 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:00:24 Download gff for
IP08379.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31206-RA | 1..832 | 1..832 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:58:12 Download gff for
IP08379.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31206-RA | 39..691 | 1..653 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:04:41 Download gff for
IP08379.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31206-RA | 1..832 | 1..832 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 21:51:59 Download gff for
IP08379.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 20106936..20107331 | 437..832 | 100 | <- | Minus |
3R | 20107396..20107500 | 332..436 | 100 | <- | Minus |
3R | 20107573..20107778 | 126..331 | 100 | <- | Minus |
3R | 20107839..20107963 | 1..125 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 21:51:59 Download gff for
IP08379.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 20106936..20107331 | 437..832 | 100 | <- | Minus |
3R | 20107396..20107500 | 332..436 | 100 | <- | Minus |
3R | 20107573..20107778 | 126..331 | 100 | <- | Minus |
3R | 20107839..20107963 | 1..125 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 21:51:59 Download gff for
IP08379.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 20106936..20107331 | 437..832 | 100 | <- | Minus |
3R | 20107396..20107500 | 332..436 | 100 | <- | Minus |
3R | 20107573..20107778 | 126..331 | 100 | <- | Minus |
3R | 20107839..20107963 | 1..125 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:00:24 Download gff for
IP08379.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 15932658..15933053 | 437..832 | 100 | <- | Minus |
arm_3R | 15933118..15933222 | 332..436 | 100 | <- | Minus |
arm_3R | 15933295..15933500 | 126..331 | 100 | <- | Minus |
arm_3R | 15933561..15933685 | 1..125 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:33:42 Download gff for
IP08379.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 19847767..19848162 | 437..832 | 100 | <- | Minus |
3R | 19848227..19848331 | 332..436 | 100 | <- | Minus |
3R | 19848404..19848609 | 126..331 | 100 | <- | Minus |
3R | 19848670..19848794 | 1..125 | 100 | | Minus |
IP08379.pep Sequence
Translation from 80 to 652
> IP08379.pep
MEYSGVRLPGIFCPDESIEQFARLYGSDNFSKMMIIATTSSPPRTMQATT
HSPPGMMGGNPSRFQGNASTAHDRNLKVNHRYAHNVQAPSNPHPVIMGPS
RFHGNLPPIQDTYLKSSPRDQGFHAYGAVHRGCGDHYSYSANLQNSKPEY
PTRPDQSGTQNPGQMYCNTQHYQNLNFYHPPPPGPRFPWL*
IP08379.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 16:00:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF17334-PA | 137 | GF17334-PA | 1..137 | 1..190 | 171 | 32.1 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 16:00:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG15597-PA | 195 | GG15597-PA | 1..195 | 1..190 | 664 | 76.4 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:11:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31206-PA | 190 | CG31206-PA | 1..190 | 1..190 | 1070 | 100 | Plus |
CG31206-PB | 198 | CG31206-PB | 1..198 | 1..190 | 1051 | 96 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 16:00:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM23209-PA | 189 | GM23209-PA | 1..189 | 1..190 | 844 | 90.5 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 16:00:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD20078-PA | 189 | GD20078-PA | 1..189 | 1..190 | 851 | 91.1 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 16:00:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE25086-PA | 186 | GE25086-PA | 1..186 | 1..190 | 619 | 71.9 | Plus |
IP08379.hyp Sequence
Translation from 80 to 652
> IP08379.hyp
MEYSGVRLPGIFCPDESIEQFARLYGSDNFSKMMIIATTSSPPRTMQATT
HSPPGMMGGNPSRFQGNASTAHDRNLKVNHRYAHNVQAPSNPHPVIMGPS
RFHGNLPPIQDTYLKSSPRDQGFHAYGAVHRGCGDHYSYSANLQNSKPEY
PTRPDQSGTQNPGQMYCNTQHYQNLNFYHPPPPGPRFPWL*
IP08379.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 11:52:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31206-PA | 190 | CG31206-PA | 1..190 | 1..190 | 1070 | 100 | Plus |
CG31206-PB | 198 | CG31206-PB | 1..198 | 1..190 | 1051 | 96 | Plus |