Clone IP08521 Report

Search the DGRC for IP08521

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:85
Well:21
Vector:pOT2
Associated Gene/TranscriptCG32461-RA
Protein status:IP08521.pep: validated not full length
Preliminary Size:759
Sequenced Size:1271

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG32461 2005-01-01 Successful iPCR screen
CG32461 2008-04-29 Release 5.5 accounting
CG32461 2008-08-15 Release 5.9 accounting
CG32461 2008-12-18 5.12 accounting

Clone Sequence Records

IP08521.complete Sequence

1271 bp (1271 high quality bases) assembled on 2005-03-06

GenBank Submission: BT023018

> IP08521.complete
CTGCAATCGACAACCGCGTCGGTAGGGAAGCAAATGGCGAACAGAGAGCC
AGAGAAAAATGAAAACGCTTTGTCTGTACGTAATTTATGCCTAATGAACT
ATTTCCGGCCAAGTGTCAATTAATGTATTCTGTTTTGGGACAACAACAAG
CAGCACAACGTGCCCGCACAAACGTTGTCACGATCATTTTTCTGGCAAAA
CTCTGCGATCTCCGCCCTATATCAGATTCCCCACCCTCCTTACCAAGGCA
ATAGCTTGCTTCCGCTGCTGTCTTCTCTTATCCACAGCTACATGCATATG
TATCTGGCCAGATCTGAAGATTGCCTGAGCTATTGGACCGTTTGTTCACA
GAGCGCAAGGGTATACAAGGAGTCTGCACAGATCATGGGTAGTATTAATA
GTGAAGAGCAAAATGTCGCTGTATCCGGATGGACAAAATCCAATTCACCG
GAATTAATTGAAGAGGAGCGACTTTACACCGAACTTGACTCGGAAGGTCG
GATGATAAGCAGGACTATGACGCCATATGAGTGTCAGCTCGAAGGCGAAG
TGGAGCAGTTGCAAGAGGCGCTTTTCAAAATCTCGTCCCATTATGCCAAA
GTTCAGTTCGGACTGCGACAAATATCCTTGGCTTCAGGTTCCGAGAGGGA
AAATCTGTTAAAAGATTTGGAGCGATTAATAGCAAAAGGACTAGATGCGA
CTGGTCCCATACGGGGCGAAAAATTCTCCATGCCAGCCAAACTTCGCGTG
AAGCAAGACAAGATTCTTTGCCAACTGCGTGGAAGTCTCGGAGACTTGGT
CGGTGCAACTGGAGTTGGCTTTCACGCAAATCATTACCCGGCCACAAACA
GATCTCTTAAGATTTATACAGGTGCTTCCAATAAGACTCCCCGCAGCAAA
GGCGTCGGCCAGGATTGTGGTATAAGCCGAAGATGCATTGGTCATGCAAA
GGAAGAAAGCAAACCTGCCACTGGATACATGAAACGCACCTGTGGTGATT
TAAGTACGGAAAGCAAGATACACCTTTACCATACCAAGTCAGCCACTTAT
TCGAAGATTCGCGGTAATAGTAAAACAACGGAAGATGGAAAAACTCGTAC
AAACAATAATTATTTGGAGCTGTTAAAGTCGAATTGAATTAAAAAAGATC
AATAACAGCGTGTAATATTCACACATGAGAAGACAGCGATTTTAAAAACT
GAAAAGTTAAATTTATATTTATTACCAAATAAAAAATGCTTAATACGTAA
AAAAAAAAAAAAAAAAAAAAA

IP08521.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:48:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG32461-RA 884 CG32461-RA 1..884 368..1250 4350 99.6 Plus
CG32461.a 984 CG32461.a 101..984 368..1250 4350 99.6 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 19:54:58
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 22943343..22944224 1248..368 4330 99.7 Minus
chr3L 24539361 chr3L 22932071..22932440 370..1 1850 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:56:23 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 19:54:56
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 22954419..22955302 1250..368 4340 99.7 Minus
3L 28110227 3L 22943149..22943518 370..1 1850 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:37:45
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 22947519..22948402 1250..368 4350 99.6 Minus
3L 28103327 3L 22936249..22936618 370..1 1850 100 Minus
Blast to na_te.dros performed on 2019-03-15 19:54:56 has no hits.

IP08521.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 19:56:00 Download gff for IP08521.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 22943343..22944224 368..1248 99 == Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:18:19 Download gff for IP08521.complete
Subject Subject Range Query Range Percent Splice Strand
CG32461-RA 1..759 385..1143 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 03:00:08 Download gff for IP08521.complete
Subject Subject Range Query Range Percent Splice Strand
CG32461-RA 1..759 385..1143 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:02:36 Download gff for IP08521.complete
Subject Subject Range Query Range Percent Splice Strand
CG32461-RA 1..759 385..1143 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:26:00 Download gff for IP08521.complete
Subject Subject Range Query Range Percent Splice Strand
CG32461-RA 1..759 385..1143 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:18:09 Download gff for IP08521.complete
Subject Subject Range Query Range Percent Splice Strand
CG32461-RA 1..882 368..1248 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:18:19 Download gff for IP08521.complete
Subject Subject Range Query Range Percent Splice Strand
CG32461-RA 1..882 368..1248 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:00:08 Download gff for IP08521.complete
Subject Subject Range Query Range Percent Splice Strand
CG32461-RA 1..882 368..1248 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:02:37 Download gff for IP08521.complete
Subject Subject Range Query Range Percent Splice Strand
CG32461-RA 1..759 385..1143 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:26:00 Download gff for IP08521.complete
Subject Subject Range Query Range Percent Splice Strand
CG32461-RA 1..882 368..1248 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:56:00 Download gff for IP08521.complete
Subject Subject Range Query Range Percent Splice Strand
3L 22954421..22955302 368..1248 99 == Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:56:00 Download gff for IP08521.complete
Subject Subject Range Query Range Percent Splice Strand
3L 22954421..22955302 368..1248 99 == Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:56:00 Download gff for IP08521.complete
Subject Subject Range Query Range Percent Splice Strand
3L 22954421..22955302 368..1248 99 == Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:00:08 Download gff for IP08521.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 22947521..22948402 368..1248 99 == Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:38:28 Download gff for IP08521.complete
Subject Subject Range Query Range Percent Splice Strand
3L 22947521..22948402 368..1248 99 == Minus

IP08521.pep Sequence

Translation from 291 to 1136

> IP08521.pep
MHMYLARSEDCLSYWTVCSQSARVYKESAQIMGSINSEEQNVAVSGWTKS
NSPELIEEERLYTELDSEGRMISRTMTPYECQLEGEVEQLQEALFKISSH
YAKVQFGLRQISLASGSERENLLKDLERLIAKGLDATGPIRGEKFSMPAK
LRVKQDKILCQLRGSLGDLVGATGVGFHANHYPATNRSLKIYTGASNKTP
RSKGVGQDCGISRRCIGHAKEESKPATGYMKRTCGDLSTESKIHLYHTKS
ATYSKIRGNSKTTEDGKTRTNNNYLELLKSN*

IP08521.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 16:27:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF16394-PA 505 GF16394-PA 31..160 59..181 361 55.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 16:27:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG13162-PA 222 GG13162-PA 1..222 32..252 892 79.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 16:27:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH14760-PA 518 GH14760-PA 25..151 58..179 300 48.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:57:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG32461-PA 252 CG32461-PA 1..250 32..281 1289 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 16:27:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11862-PA 768 GI11862-PA 5..150 47..179 263 42.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 16:27:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL25175-PA 488 GL25175-PA 83..207 60..177 287 47.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 16:27:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA16921-PA 482 GA16921-PA 81..205 60..177 283 46.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 16:27:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM22070-PA 144 GM22070-PA 1..132 32..163 621 88.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 16:27:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12047-PA 247 GD12047-PA 1..247 32..278 1133 87 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 16:27:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13557-PA 873 GJ13557-PA 22..148 56..179 277 47.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 16:27:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK25856-PA 592 GK25856-PA 41..169 58..178 324 53.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 16:27:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE19484-PA 181 GE19484-PA 1..181 32..212 687 75.1 Plus

IP08521.hyp Sequence

Translation from 369 to 1141

> IP08521.hyp
ESAQIMGSINSEEQNVAVSGWTKSNSPELIEEERLYTELDSEGRMISRTM
TPYECQLEGEVEQLQEALFKISSHYAKVQFGLRQISLASGSERENLLKDL
ERLIAKGLDATGPIRGEKFSMPAKLRVKQDKILCQLRGSLGDLVGATGVG
FHANHYPATNRSLKIYTGASNKTPRSKGVGQDCGISRRCIGHAKEESKPA
TGYMKRTCGDLSTESKIHLYHTKSATYSKIRGNSKTTEDGKTRTNNNYLE
LLKSNLI*

IP08521.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 11:54:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG32461-PA 252 CG32461-PA 1..252 6..257 1297 100 Plus