Clone IP08602 Report

Search the DGRC for IP08602

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:86
Well:2
Vector:pOT2
Associated Gene/TranscriptElo68alpha-RA
Protein status:IP08602.pep: gold
Preliminary Size:669
Sequenced Size:971

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG32072 2005-01-01 Successful iPCR screen
Elo68alpha 2008-04-29 Release 5.5 accounting
Elo68alpha 2008-08-15 Release 5.9 accounting
Elo68alpha 2008-12-18 5.12 accounting

Clone Sequence Records

IP08602.complete Sequence

971 bp (971 high quality bases) assembled on 2005-03-06

GenBank Submission: BT023054

> IP08602.complete
TTTAGCTCTCGGAGCACATATTCGATGGCATCACTTGGCATCTCATTTCA
TCCATTTCCGGATCAGCCGGATGAACGGACACGCAACTGGCCACTGGTGG
ATTCATTTTGGACTGTGCCCGTCCTGCTTTCCATTTATTTACTTATGGTG
CGCTATGCGCCCAAGTGGACAACCAGACACAAGCCGCTGCAGCTGAGAGC
TCCATTGTTCTGTCACAGCTTGGCCATGGTGTTCCTAAATGGATATATCT
GCCTGGAACTCTATGCGGCAACCAGGGATCTTGACTACAATTTCGGATGT
CAGCCATGTCGGGTTAGCTTTGATCCACACGAAATGCGTCTTACAAAGGC
ATTTTGGTGGTTTTACATTTCGAAAATCCTGGAATTCGCCGACACGGCTT
TCTTCATCCTGCGCCAAAAGTGGTCCCAGCTGAGCTTCCTTCATGTGTAT
CATCATAGCACCATGTTCGTCTTTTGTTGGATTTTAATTAAGTGGATGCC
AACGGGTTCGACCTATGTGCCGGCCATGATAAACTCCTTCGTGCACATCA
TCATGTATGGCTATTATGCCCTGAGTGTGCTGGGTCCTCGAGTCCAGCGG
TTCCTCTGGTGGAAGCGCTACTTAACTGGCCTGCAGCTGGTCCAGTTTAC
CATTATCTTCTTTTGGGCGTCACAGATGTTAGTCCGTGGATGCGAGTACG
GCACCTGGATAACCCTATCGATGGCCATATATTCCCTGCCTTTCCTCTTT
ATGTTCGGGAAATTCTATATGCAAAAGTACACGGTATCAGCAGTCGGCAA
GAAACCTATATAAACCAATAACACTTTTATAAATAGCTTAAATTCTATTG
CTCGTTTTAGTTGTAAAAACCAAGTGCATTTTTATACTAATTTTCAAACA
AATTGACACAGTTAATAAAAGCTCGACCTTGAATATCAATTAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAA

IP08602.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:48:21
Subject Length Description Subject Range Query Range Score Percent Strand
Elo68alpha-RA 938 Elo68alpha-RA 2..938 1..937 4685 100 Plus
Elo68beta-RC 1106 Elo68beta-RC 639..958 355..674 925 85.9 Plus
Elo68beta-RB 833 Elo68beta-RB 375..694 355..674 925 85.9 Plus
Elo68beta-RC 1106 Elo68beta-RC 352..485 124..257 385 85.8 Plus
Elo68beta-RB 833 Elo68beta-RB 144..277 124..257 385 85.8 Plus
Elo68beta-RC 1106 Elo68beta-RC 1..40 906..945 200 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 14:07:53
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 11092754..11093183 941..512 2150 100 Minus
chr3L 24539361 chr3L 11093249..11093420 511..340 860 100 Minus
chr3L 24539361 chr3L 11093723..11093894 176..5 860 100 Minus
chr3L 24539361 chr3L 11093504..11093669 339..174 800 98.8 Minus
chr3L 24539361 chr3L 11091704..11091853 674..525 570 92 Minus
chr3L 24539361 chr3L 11091930..11092084 509..355 385 83.2 Minus
chr3L 24539361 chr3L 11092160..11092315 335..180 240 76.9 Minus
chr3L 24539361 chr3L 11092386..11092512 176..50 200 77.2 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:56:35 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 14:07:51
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 11101867..11102300 945..512 2170 100 Minus
3L 28110227 3L 11102855..11103030 176..1 880 100 Minus
3L 28110227 3L 11102366..11102537 511..340 860 100 Minus
3L 28110227 3L 11102621..11102786 339..174 830 100 Minus
3L 28110227 3L 11100821..11100970 674..525 570 92 Minus
3L 28110227 3L 11101047..11101201 509..355 385 83.2 Minus
3L 28110227 3L 11101277..11101432 335..180 240 76.9 Minus
3L 28110227 3L 11101503..11101555 176..124 190 90.6 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:37:49
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 11094967..11095400 945..512 2170 100 Minus
3L 28103327 3L 11095955..11096130 176..1 880 100 Minus
3L 28103327 3L 11095466..11095637 511..340 860 100 Minus
3L 28103327 3L 11095721..11095886 339..174 830 100 Minus
3L 28103327 3L 11093921..11094070 674..525 570 92 Minus
3L 28103327 3L 11094147..11094301 509..355 385 83.2 Minus
3L 28103327 3L 11094455..11094532 257..180 210 84.6 Minus
3L 28103327 3L 11094603..11094655 176..124 190 90.5 Minus
Blast to na_te.dros performed on 2019-03-16 14:07:51 has no hits.

IP08602.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 14:09:18 Download gff for IP08602.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 11093504..11093666 177..339 98 <- Minus
chr3L 11092754..11093183 512..941 100 <- Minus
chr3L 11093249..11093420 340..511 100 <- Minus
chr3L 11093723..11093897 1..176 98   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:37:21 Download gff for IP08602.complete
Subject Subject Range Query Range Percent Splice Strand
Elo68alpha-RA 1..789 25..813 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:18:25 Download gff for IP08602.complete
Subject Subject Range Query Range Percent Splice Strand
Elo68alpha-RA 1..789 25..813 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 14:46:10 Download gff for IP08602.complete
Subject Subject Range Query Range Percent Splice Strand
Elo68alpha-RA 1..789 25..813 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:02:42 Download gff for IP08602.complete
Subject Subject Range Query Range Percent Splice Strand
Elo68alpha-RA 1..789 25..813 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:23:14 Download gff for IP08602.complete
Subject Subject Range Query Range Percent Splice Strand
Elo68alpha-RA 1..789 25..813 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:18:18 Download gff for IP08602.complete
Subject Subject Range Query Range Percent Splice Strand
Elo68alpha-RA 1..930 8..937 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:18:25 Download gff for IP08602.complete
Subject Subject Range Query Range Percent Splice Strand
Elo68alpha-RA 1..930 8..937 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 14:46:10 Download gff for IP08602.complete
Subject Subject Range Query Range Percent Splice Strand
Elo68alpha-RA 1..937 1..937 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:02:42 Download gff for IP08602.complete
Subject Subject Range Query Range Percent Splice Strand
Elo68alpha-RA 1..930 8..937 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:23:14 Download gff for IP08602.complete
Subject Subject Range Query Range Percent Splice Strand
Elo68alpha-RA 1..937 1..937 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 14:09:18 Download gff for IP08602.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11101871..11102300 512..941 100 <- Minus
3L 11102366..11102537 340..511 100 <- Minus
3L 11102621..11102783 177..339 100 <- Minus
3L 11102855..11103030 1..176 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 14:09:18 Download gff for IP08602.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11101871..11102300 512..941 100 <- Minus
3L 11102366..11102537 340..511 100 <- Minus
3L 11102621..11102783 177..339 100 <- Minus
3L 11102855..11103030 1..176 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 14:09:18 Download gff for IP08602.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11101871..11102300 512..941 100 <- Minus
3L 11102366..11102537 340..511 100 <- Minus
3L 11102621..11102783 177..339 100 <- Minus
3L 11102855..11103030 1..176 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 14:46:10 Download gff for IP08602.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 11095955..11096130 1..176 100   Minus
arm_3L 11094971..11095400 512..941 100 <- Minus
arm_3L 11095466..11095637 340..511 100 <- Minus
arm_3L 11095721..11095883 177..339 100 <- Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:38:35 Download gff for IP08602.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11095466..11095637 340..511 100 <- Minus
3L 11095721..11095883 177..339 100 <- Minus
3L 11095955..11096130 1..176 100   Minus
3L 11094971..11095400 512..941 100 <- Minus

IP08602.hyp Sequence

Translation from 0 to 812

> IP08602.hyp
FSSRSTYSMASLGISFHPFPDQPDERTRNWPLVDSFWTVPVLLSIYLLMV
RYAPKWTTRHKPLQLRAPLFCHSLAMVFLNGYICLELYAATRDLDYNFGC
QPCRVSFDPHEMRLTKAFWWFYISKILEFADTAFFILRQKWSQLSFLHVY
HHSTMFVFCWILIKWMPTGSTYVPAMINSFVHIIMYGYYALSVLGPRVQR
FLWWKRYLTGLQLVQFTIIFFWASQMLVRGCEYGTWITLSMAIYSLPFLF
MFGKFYMQKYTVSAVGKKPI*

IP08602.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 11:55:01
Subject Length Description Subject Range Query Range Score Percent Strand
Elo68alpha-PA 262 CG32072-PA 1..262 9..270 1445 100 Plus
Elo68beta-PB 269 CG11801-PB 16..267 17..268 1087 75.8 Plus
CG5326-PA 277 CG5326-PA 19..269 19..267 473 39 Plus
CG31522-PF 365 CG31522-PF 20..258 24..260 467 38.1 Plus
CG31522-PB 365 CG31522-PB 20..258 24..260 467 38.1 Plus

IP08602.pep Sequence

Translation from 24 to 812

> IP08602.pep
MASLGISFHPFPDQPDERTRNWPLVDSFWTVPVLLSIYLLMVRYAPKWTT
RHKPLQLRAPLFCHSLAMVFLNGYICLELYAATRDLDYNFGCQPCRVSFD
PHEMRLTKAFWWFYISKILEFADTAFFILRQKWSQLSFLHVYHHSTMFVF
CWILIKWMPTGSTYVPAMINSFVHIIMYGYYALSVLGPRVQRFLWWKRYL
TGLQLVQFTIIFFWASQMLVRGCEYGTWITLSMAIYSLPFLFMFGKFYMQ
KYTVSAVGKKPI*

IP08602.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 16:28:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10549-PA 273 GF10549-PA 22..271 11..260 912 64.4 Plus
Dana\GF16148-PA 277 GF16148-PA 19..262 11..252 459 40.2 Plus
Dana\GF18859-PA 332 GF18859-PA 50..295 12..255 421 36.9 Plus
Dana\GF18506-PA 395 GF18506-PA 17..293 13..260 418 34.7 Plus
Dana\GF18505-PA 350 GF18505-PA 51..258 45..252 415 40.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 16:28:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG13939-PA 268 GG13939-PA 8..268 2..262 1237 85.4 Plus
Dere\GG13940-PA 268 GG13940-PA 15..268 9..262 1033 73.2 Plus
Dere\GG12507-PA 277 GG12507-PA 19..262 11..252 455 39.8 Plus
Dere\GG11146-PA 336 GG11146-PA 50..292 12..252 410 36.6 Plus
Dere\GG11532-PA 354 GG11532-PA 12..262 11..256 409 36 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 16:28:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16129-PA 268 GH16129-PA 13..265 9..262 825 60.6 Plus
Dgri\GH17398-PA 285 GH17398-PA 19..262 11..252 454 39.3 Plus
Dgri\GH18533-PA 376 GH18533-PA 17..267 13..262 430 36.3 Plus
Dgri\GH18331-PA 339 GH18331-PA 52..302 12..260 422 36.2 Plus
Dgri\GH18532-PA 351 GH18532-PA 18..258 13..252 418 36.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:07:29
Subject Length Description Subject Range Query Range Score Percent Strand
Elo68alpha-PA 262 CG32072-PA 1..262 1..262 1445 100 Plus
Elo68beta-PB 269 CG11801-PB 16..267 9..260 1087 75.8 Plus
CG5326-PA 277 CG5326-PA 19..269 11..259 473 39 Plus
CG31522-PF 365 CG31522-PF 20..258 16..252 467 38.1 Plus
CG31522-PB 365 CG31522-PB 20..258 16..252 467 38.1 Plus
CG31522-PD 365 CG31522-PD 20..258 16..252 467 38.1 Plus
CG31522-PH 364 CG31522-PH 20..257 16..252 463 37.8 Plus
CG31522-PG 364 CG31522-PG 20..257 16..252 463 37.8 Plus
CG31522-PA 364 CG31522-PA 20..257 16..252 463 37.8 Plus
CG2781-PA 329 CG2781-PA 17..258 13..252 456 35.1 Plus
CG31522-PI 392 CG31522-PI 20..285 16..252 440 34.6 Plus
CG33110-PA 337 CG33110-PA 51..292 13..252 439 37.1 Plus
CG31523-PF 354 CG31523-PF 22..262 23..256 436 36.5 Plus
CG31523-PE 354 CG31523-PE 22..262 23..256 436 36.5 Plus
CG31523-PG 354 CG31523-PG 22..262 23..256 436 36.5 Plus
CG31523-PD 354 CG31523-PD 22..262 23..256 436 36.5 Plus
CG31523-PA 354 CG31523-PA 22..262 23..256 436 36.5 Plus
CG31523-PB 354 CG31523-PB 22..262 23..256 436 36.5 Plus
CG31523-PC 354 CG31523-PC 22..262 23..256 436 36.5 Plus
sit-PA 295 CG5278-PA 16..256 11..252 430 37.8 Plus
bond-PC 322 CG6921-PC 20..257 16..252 388 31.8 Plus
bond-PA 322 CG6921-PA 20..257 16..252 388 31.8 Plus
bond-PB 322 CG6921-PB 20..257 16..252 388 31.8 Plus
CG16904-PA 262 CG16904-PA 6..249 13..252 323 32.9 Plus
CG6660-PA 272 CG6660-PA 13..257 11..252 323 31.3 Plus
CG17821-PA 262 CG17821-PA 29..254 31..252 295 30.8 Plus
eloF-PA 257 CG16905-PA 11..244 23..252 289 30.8 Plus
CG18609-PA 263 CG18609-PA 16..250 23..252 284 31.8 Plus
CG9458-PA 264 CG9458-PA 20..253 23..252 280 31.2 Plus
CG9459-PA 265 CG9459-PA 20..265 23..259 279 30 Plus
CG8534-PA 265 CG8534-PA 19..259 23..260 278 30.7 Plus
CG31141-PA 253 CG31141-PA 8..245 15..252 256 30.6 Plus
CG30008-PA 266 CG30008-PA 23..252 29..255 215 29.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 16:28:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI12398-PA 258 GI12398-PA 11..255 9..253 802 62 Plus
Dmoj\GI22725-PA 285 GI22725-PA 19..262 11..252 455 39.8 Plus
Dmoj\GI22070-PA 383 GI22070-PA 18..257 14..252 424 37.5 Plus
Dmoj\GI23311-PA 350 GI23311-PA 50..292 12..252 415 37 Plus
Dmoj\GI22068-PA 354 GI22068-PA 10..258 9..252 413 37.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 16:28:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL24915-PA 271 GL24915-PA 13..265 5..255 945 69.2 Plus
Dper\GL13683-PA 277 GL13683-PA 19..272 11..262 456 38.2 Plus
Dper\GL22348-PA 404 GL22348-PA 20..285 16..252 416 35.7 Plus
Dper\GL13810-PA 337 GL13810-PA 50..294 12..255 415 37.3 Plus
Dper\GL22347-PA 387 GL22347-PA 51..258 45..252 409 38.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 16:28:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA23552-PA 271 GA23552-PA 13..265 5..255 948 69.6 Plus
Dpse\GA18806-PA 277 GA18806-PA 19..272 11..262 456 38.2 Plus
Dpse\GA16297-PA 404 GA16297-PA 20..285 16..252 417 35.7 Plus
Dpse\GA26807-PA 337 GA26807-PA 50..294 12..255 415 37.3 Plus
Dpse\GA16298-PA 359 GA16298-PA 51..258 45..252 409 38.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 16:28:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24775-PA 262 GM24775-PA 1..262 1..262 1344 95 Plus
Dsec\GM24776-PA 268 GM24776-PA 16..266 9..259 1034 74.1 Plus
Dsec\GM23639-PA 277 GM23639-PA 19..262 11..252 455 39.8 Plus
Dsec\GM10700-PA 354 GM10700-PA 12..266 11..260 411 35.4 Plus
Dsec\GM26444-PA 336 GM26444-PA 50..292 12..252 407 35.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 16:28:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12826-PA 262 GD12826-PA 1..262 1..262 1351 95.4 Plus
Dsim\GD12827-PA 267 GD12827-PA 16..265 9..260 1014 73.8 Plus
Dsim\GD18449-PA 277 GD18449-PA 19..262 11..252 455 39.8 Plus
Dsim\GD20963-PA 336 GD20963-PA 50..292 12..252 411 37 Plus
Dsim\GD19675-PA 354 GD19675-PA 12..262 11..256 402 35.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 16:28:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12287-PA 261 GJ12287-PA 1..256 1..255 850 62.5 Plus
Dvir\GJ24664-PA 285 GJ24664-PA 19..262 11..252 457 39.8 Plus
Dvir\GJ24118-PA 407 GJ24118-PA 17..295 13..262 418 34.4 Plus
Dvir\GJ24117-PA 354 GJ24117-PA 18..258 13..252 417 37.8 Plus
Dvir\GJ24167-PA 343 GJ24167-PA 50..295 12..255 410 36.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 16:28:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK12306-PA 226 GK12306-PA 16..216 10..210 819 70.1 Plus
Dwil\GK14434-PA 285 GK14434-PA 19..262 11..252 458 39.8 Plus
Dwil\GK13751-PA 376 GK13751-PA 20..257 16..252 415 36.6 Plus
Dwil\GK13749-PA 359 GK13749-PA 16..258 11..252 407 36.2 Plus
Dwil\GK12818-PA 327 GK12818-PA 49..293 13..255 406 35.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 16:28:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20238-PA 268 GE20238-PA 8..268 2..262 1276 88.9 Plus
Dyak\GE20239-PA 268 GE20239-PA 15..266 9..260 989 71 Plus
Dyak\GE24028-PA 277 GE24028-PA 19..262 11..252 455 39.8 Plus
Dyak\GE25348-PA 364 GE25348-PA 17..257 13..252 430 37.3 Plus
Dyak\GE10311-PA 334 GE10311-PA 50..292 12..252 410 36.6 Plus