Clone IP08609 Report

Search the DGRC for IP08609

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:86
Well:9
Vector:pOT2
Associated Gene/TranscriptCG32271-RA
Protein status:IP08609.pep: gold
Preliminary Size:747
Sequenced Size:949

Clone Sequence Records

IP08609.complete Sequence

949 bp assembled on 2009-04-28

GenBank Submission: BT082081.1

> IP08609.complete
CAGCGATCAAAAAAGTGTTTACCCAGCTGGACGGTGACACGAAAACTCGG
TTGGTAGTTACAGCTACCGGATACGGCAAATATCGAGGGATGGAGTAAGC
CGATGGCGACGCTATGGCTCGTGCTCCACCTGATCCCACTTTGCTGGGCG
GCCAGCAACGAGGCCAACAGTCGGATTGTGGGCGGTGTACCGGTGGACAT
CGCTAGTGTGCCCTACTTGGTGAACCTGCGCATCGGTGGCAACTTTATGT
GCGGCGGTTCATTGGTTACCCCCCAGCATGTTGTCACCGCTGCCCACTGC
GTCAAGGGAATTGGCGCTTCTCGTATCCTAGTCGTTGCCGGGGTAACGAG
ACTTACGGAGACGGGTGTCAGAAGTGGTGTGGACAAGGTTTATACCCCAA
AGGCTTACAACACCCGCACCCTCACCTCGGACGTGGCTGTTTTAAAACTA
AAAGCTCCCATCAGCGGTCCCAAAGTGTCCACCATTGAGCTGTGCAATAC
CAGCTTCAAGGCAGGCGATCTGATCAAGGTCTCTGGCTGGGGACAAATTA
CGGAGCGCAACAAGGCAGTTTCAATGCAGGTGCGCAGCGTAGATGTGGCG
CTCATTCCGCGTAAGGCATGCATGAGCCAGTATAAGCTGCGCGGAACCAT
CACCAACACCATGTTTTGCGCCTCAGTGCCTGGCGTCAAGGATGCCTGCG
AAGGCGACTCTGGAGGACCTGCCGTCTATCAGGGTCAACTATGCGGAATT
GTCTCGTGGGGCGTTGGATGCGCACGAAAGAGTTCGCCGGGAGTCTATAC
CAATGTCAAGACTGTTAGGAGCTTTATCGACAAGGCTTTGGGCATGTAGA
CCCGAATAGTAAAATTTTTAGATGCTTAATTAGGCCTAGAGATCTGAATT
TAATTAAAATTTAACCTGCTCCTCTAAAAAAAAAAAAAAAAAAAAAAAA

IP08609.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:22:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG32271-RA 925 CG32271-RA 1..925 1..925 4625 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-17 00:12:05
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 3201637..3202561 925..1 4520 99.2 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:56:38 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-17 00:12:03
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 3202236..3203162 927..1 4635 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:08:50
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 3202236..3203162 927..1 4635 100 Minus
Blast to na_te.dros performed on 2019-03-17 00:12:04 has no hits.

IP08609.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-17 00:13:06 Download gff for IP08609.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 3201637..3202561 1..925 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 17:51:06 Download gff for IP08609.complete
Subject Subject Range Query Range Percent Splice Strand
CG32271-RA 1..747 103..849 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 13:46:24 Download gff for IP08609.complete
Subject Subject Range Query Range Percent Splice Strand
CG32271-RA 1..747 103..849 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 18:31:13 Download gff for IP08609.complete
Subject Subject Range Query Range Percent Splice Strand
CG32271-RA 1..747 103..849 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:13:26 Download gff for IP08609.complete
Subject Subject Range Query Range Percent Splice Strand
CG32271-RA 1..747 103..849 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-04-28 12:19:39 Download gff for IP08609.complete
Subject Subject Range Query Range Percent Splice Strand
CG32271-RA 1..747 103..849 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 13:46:24 Download gff for IP08609.complete
Subject Subject Range Query Range Percent Splice Strand
CG32271-RA 1..925 1..925 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:31:13 Download gff for IP08609.complete
Subject Subject Range Query Range Percent Splice Strand
CG32271-RA 1..925 1..925 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:13:26 Download gff for IP08609.complete
Subject Subject Range Query Range Percent Splice Strand
CG32271-RA 1..925 1..925 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:13:06 Download gff for IP08609.complete
Subject Subject Range Query Range Percent Splice Strand
3L 3202238..3203162 1..925 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:13:06 Download gff for IP08609.complete
Subject Subject Range Query Range Percent Splice Strand
3L 3202238..3203162 1..925 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:13:06 Download gff for IP08609.complete
Subject Subject Range Query Range Percent Splice Strand
3L 3202238..3203162 1..925 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:31:13 Download gff for IP08609.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 3202238..3203162 1..925 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:32:13 Download gff for IP08609.complete
Subject Subject Range Query Range Percent Splice Strand
3L 3202238..3203162 1..925 100   Minus

IP08609.hyp Sequence

Translation from 102 to 848

> IP08609.hyp
MATLWLVLHLIPLCWAASNEANSRIVGGVPVDIASVPYLVNLRIGGNFMC
GGSLVTPQHVVTAAHCVKGIGASRILVVAGVTRLTETGVRSGVDKVYTPK
AYNTRTLTSDVAVLKLKAPISGPKVSTIELCNTSFKAGDLIKVSGWGQIT
ERNKAVSMQVRSVDVALIPRKACMSQYKLRGTITNTMFCASVPGVKDACE
GDSGGPAVYQGQLCGIVSWGVGCARKSSPGVYTNVKTVRSFIDKALGM*

IP08609.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 11:55:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG32271-PA 248 CG32271-PA 1..248 1..248 1284 100 Plus
CG3650-PA 249 CG3650-PA 1..247 4..246 550 44.8 Plus
CG33159-PA 257 CG33159-PA 7..252 4..246 484 42.7 Plus
CG32270-PA 259 CG32270-PA 30..251 24..242 475 45.5 Plus
CG32269-PB 332 CG32269-PB 100..324 16..241 447 40.5 Plus

IP08609.pep Sequence

Translation from 102 to 848

> IP08609.pep
MATLWLVLHLIPLCWAASNEANSRIVGGVPVDIASVPYLVNLRIGGNFMC
GGSLVTPQHVVTAAHCVKGIGASRILVVAGVTRLTETGVRSGVDKVYTPK
AYNTRTLTSDVAVLKLKAPISGPKVSTIELCNTSFKAGDLIKVSGWGQIT
ERNKAVSMQVRSVDVALIPRKACMSQYKLRGTITNTMFCASVPGVKDACE
GDSGGPAVYQGQLCGIVSWGVGCARKSSPGVYTNVKTVRSFIDKALGM*

IP08609.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 17:16:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24381-PA 250 GF24381-PA 1..250 1..248 1134 86.4 Plus
Dana\GF13344-PA 260 GF13344-PA 28..258 16..246 541 44 Plus
Dana\GF20077-PA 252 GF20077-PA 23..244 24..242 454 44.1 Plus
Dana\GF10196-PA 263 GF10196-PA 48..257 38..246 440 42.4 Plus
Dana\GF10198-PA 272 GF10198-PA 44..268 24..246 430 40 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 17:16:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14278-PA 248 GG14278-PA 1..248 1..248 1248 95.6 Plus
Dere\GG23011-PA 246 GG23011-PA 15..244 17..246 537 45 Plus
Dere\GG14272-PA 259 GG14272-PA 30..251 24..242 487 46.8 Plus
Dere\GG14277-PA 257 GG14277-PA 19..252 18..246 453 43.8 Plus
Dere\GG13274-PA 273 GG13274-PA 41..267 22..246 452 40.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 17:16:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15252-PA 261 GH15252-PA 26..261 16..248 905 72.5 Plus
Dgri\GH15251-PA 253 GH15251-PA 1..248 1..246 514 43.4 Plus
Dgri\GH15244-PA 267 GH15244-PA 34..258 24..242 475 44 Plus
Dgri\GH22870-PA 262 GH22870-PA 10..256 6..244 436 44.2 Plus
Dgri\GH22926-PA 256 GH22926-PA 26..249 20..242 400 38.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:13:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG32271-PA 248 CG32271-PA 1..248 1..248 1284 100 Plus
CG3650-PA 249 CG3650-PA 1..247 4..246 550 44.8 Plus
CG33159-PA 257 CG33159-PA 7..252 4..246 484 42.7 Plus
CG32270-PA 259 CG32270-PA 30..251 24..242 475 45.5 Plus
CG32269-PB 332 CG32269-PB 100..324 16..241 447 40.5 Plus
CG32269-PA 332 CG32269-PA 100..324 16..241 447 40.5 Plus
Sems-PA 275 CG10586-PA 42..267 23..246 442 40.3 Plus
CG11037-PA 292 CG11037-PA 60..285 23..246 439 40.3 Plus
CG10587-PA 276 CG10587-PA 44..269 23..246 418 38.9 Plus
alphaTry-PA 256 CG18444-PA 26..249 20..242 406 38.2 Plus
CG10587-PC 289 CG10587-PC 44..282 23..246 404 37.2 Plus
gammaTry-PA 253 CG30028-PA 26..249 20..242 399 36 Plus
CG30025-PA 253 CG30025-PA 26..249 20..242 399 36 Plus
deltaTry-PA 253 CG12351-PA 26..249 20..242 399 36 Plus
CG30031-PA 253 CG30031-PA 26..249 20..242 399 36 Plus
CG8299-PA 260 CG8299-PA 7..254 4..244 398 37.6 Plus
betaTry-PB 253 CG18211-PB 26..249 20..242 397 36.9 Plus
betaTry-PA 253 CG18211-PA 26..249 20..242 397 36.9 Plus
CG33160-PA 258 CG33160-PA 27..254 18..246 379 38.7 Plus
CG31954-PA 277 CG31954-PA 41..277 15..248 366 35.1 Plus
CG7829-PA 253 CG7829-PA 2..249 1..246 358 33.5 Plus
Try29F-PD 267 CG9564-PD 39..267 22..248 357 37.5 Plus
Try29F-PC 267 CG9564-PC 39..267 22..248 357 37.5 Plus
CG17571-PB 258 CG17571-PB 30..251 24..242 353 38.6 Plus
CG17571-PA 258 CG17571-PA 30..251 24..242 353 38.6 Plus
epsilonTry-PA 256 CG18681-PA 26..251 20..244 349 33.9 Plus
Ser8-PA 260 CG4812-PA 28..256 18..245 349 35.5 Plus
zetaTry-PA 280 CG12387-PA 36..277 22..246 348 38.3 Plus
etaTry-PA 262 CG12386-PA 11..256 7..244 344 37.3 Plus
CG11836-PI 281 CG11836-PI 39..263 18..235 340 37 Plus
CG11836-PJ 333 CG11836-PJ 91..315 18..235 340 37 Plus
CG11192-PB 279 CG11192-PB 7..263 4..246 335 35.1 Plus
thetaTry-PA 262 CG12385-PA 30..255 20..242 334 37.4 Plus
CG18735-PA 364 CG18735-PA 72..311 14..242 328 35 Plus
CG32376-PA 291 CG32376-PA 64..288 23..246 326 36.6 Plus
CG13430-PB 267 CG13430-PB 12..263 4..246 325 33.2 Plus
CG13430-PA 267 CG13430-PA 12..263 4..246 325 33.2 Plus
lambdaTry-PA 272 CG12350-PA 33..256 22..242 324 34.8 Plus
CG34458-PA 257 CG34458-PA 30..251 23..242 320 34.7 Plus
iotaTry-PA 252 CG7754-PA 10..248 7..245 319 34.7 Plus
CG10405-PB 268 CG10405-PB 28..262 16..242 316 34.5 Plus
CG32277-PA 261 CG32277-PA 26..246 24..237 315 35.6 Plus
CG17239-PB 248 CG17239-PB 16..237 17..242 314 36.6 Plus
CG17239-PA 248 CG17239-PA 16..237 17..242 314 36.6 Plus
CG32755-PA 315 CG32755-PA 37..274 24..245 312 35.5 Plus
CG9676-PA 251 CG9676-PA 8..245 10..242 311 34.6 Plus
CG9294-PB 352 CG9294-PB 100..327 24..235 310 37 Plus
CG11836-PF 223 CG11836-PF 8..205 46..235 302 37.1 Plus
CG11836-PE 223 CG11836-PE 8..205 46..235 302 37.1 Plus
CG11836-PG 223 CG11836-PG 8..205 46..235 302 37.1 Plus
CG11836-PC 223 CG11836-PC 8..205 46..235 302 37.1 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 17:16:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11961-PA 263 GI11961-PA 31..261 17..246 893 71.9 Plus
Dmoj\GI11960-PA 250 GI11960-PA 4..247 8..246 508 41.8 Plus
Dmoj\GI11954-PA 218 GI11954-PA 1..209 39..242 455 45.9 Plus
Dmoj\GI21250-PA 267 GI21250-PA 14..261 2..244 419 42.5 Plus
Dmoj\GI18354-PA 254 GI18354-PA 20..248 16..242 406 40.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 17:16:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL25243-PA 261 GL25243-PA 31..261 18..248 1030 81.8 Plus
Dper\GL25242-PA 254 GL25242-PA 3..249 5..246 508 44.5 Plus
Dper\GL25238-PA 270 GL25238-PA 37..266 20..246 447 41.7 Plus
Dper\GL26259-PA 274 GL26259-PA 42..269 23..248 425 39 Plus
Dper\GL20660-PA 260 GL20660-PA 12..254 7..244 399 39.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 17:16:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA16803-PA 257 GA16803-PA 27..257 18..248 1035 82.3 Plus
Dpse\GA17587-PA 255 GA17587-PA 19..253 13..246 533 45.3 Plus
Dpse\GA23737-PA 270 GA23737-PA 26..266 10..246 445 40.2 Plus
Dpse\GA16805-PA 467 GA16805-PA 256..462 45..246 436 44 Plus
Dpse\GA10417-PA 274 GA10417-PA 42..269 23..248 425 39 Plus
Dpse\GA16805-PA 467 GA16805-PA 24..239 24..237 254 36.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 17:16:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM14071-PA 248 GM14071-PA 1..248 1..248 1273 97.6 Plus
Dsec\GM11905-PA 249 GM11905-PA 18..247 17..246 546 46.3 Plus
Dsec\GM14070-PA 256 GM14070-PA 7..252 4..246 481 43.4 Plus
Dsec\GM22176-PA 278 GM22176-PA 41..267 22..246 445 39.6 Plus
Dsec\GM14065-PA 256 GM14065-PA 27..248 24..242 443 45 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 17:16:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD17603-PA 162 GD17603-PA 1..159 1..159 816 98.7 Plus
Dsim\GD11903-PA 249 GD11903-PA 18..247 17..246 549 46.3 Plus
Dsim\GD13344-PA 256 GD13344-PA 7..252 4..246 477 43 Plus
Dsim\GD17559-PA 278 GD17559-PA 41..267 22..246 451 40.1 Plus
Dsim\GD12154-PA 292 GD12154-PA 59..285 22..246 437 39.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 17:16:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12185-PA 243 GJ12185-PA 11..243 17..248 952 75.5 Plus
Dvir\GJ12183-PA 250 GJ12183-PA 19..247 23..246 495 44.8 Plus
Dvir\GJ12179-PA 262 GJ12179-PA 30..253 24..242 475 42.9 Plus
Dvir\GJ12587-PA 284 GJ12587-PA 45..276 21..246 443 41.8 Plus
Dvir\GJ20854-PA 260 GJ20854-PA 8..254 6..244 413 41.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 17:16:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK19136-PA 252 GK19136-PA 23..252 19..248 982 78.3 Plus
Dwil\GK21642-PA 254 GK21642-PA 30..252 24..246 534 46.9 Plus
Dwil\GK19135-PA 263 GK19135-PA 24..261 9..248 519 46.7 Plus
Dwil\GK25573-PA 253 GK25573-PA 20..245 20..242 448 44.2 Plus
Dwil\GK13475-PA 251 GK13475-PA 18..245 22..246 409 38.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 17:16:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20706-PA 248 GE20706-PA 1..248 1..248 1238 94.8 Plus
Dyak\GE14448-PA 249 GE14448-PA 21..243 20..242 552 48.7 Plus
Dyak\GE20705-PA 257 GE20705-PA 19..252 18..246 478 43.4 Plus
Dyak\GE20700-PA 260 GE20700-PA 29..252 22..242 470 44.6 Plus
Dyak\GE22728-PA 273 GE22728-PA 41..269 22..248 457 41.5 Plus