Clone IP08610 Report

Search the DGRC for IP08610

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:86
Well:10
Vector:pOT2
Associated Gene/TranscriptCG32299-RA
Protein status:IP08610.pep: gold
Preliminary Size:660
Sequenced Size:1406

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG32298 2008-04-29 Release 5.5 accounting
CG32298 2008-08-15 Release 5.9 accounting
CG32299 2008-08-15 Release 5.9 accounting
CG32298 2008-12-18 5.12 accounting
CG32299 2008-12-18 5.12 accounting

Clone Sequence Records

IP08610.complete Sequence

1406 bp assembled on 2007-05-22

GenBank Submission: BT030835

> IP08610.complete
TTGCCCAGAAGAACTCCTAAGAAGGACCAGATATTTCCTCCAAGAGGGAC
GCTTAATATGGTTCGCCCTACTTAGGTGCTCTAAATTCCGGCGATAATCT
ACATCTCTATAATGAACATAGTTTTAAATACATCTGTTTGATATACCTAA
AAAAAAAAAAAAAAAACTCGAGTTGGCACCTTTGGGAAAATTGAAAATTA
ATAGTCAAAAAGTTCAGCTTTTCAGCATGGATTCGCTGCTCCAGAAGATC
TCAGAGCTGTTTCATAACTTTACTTCCCCCATTGCAGCGGTGGTATACAG
TCCTAAGAATGTAGAGAATGCACAAGAAACCCAAACCACTGCAAACCAAA
TACCAGAAGCTTCGAGCCAGGAAACTGGGAAGCCGGACTCTGATCGAACT
GCACCTGATACCACTGAACCCCTAACCTCTGGTGATATTCCAACCCCAGA
TGTCAAGTTGCAAAAGTTTAGGGAACAAACGGCTCCAGCTTTAAACTACG
AGCTAGAGTTTGTTGACTTCGTAGATCGCAACGCACCTCAGGGTCTATCG
AAGAAGATAATTGATATATTGCCCTATCTGGAGGTCAGCTTTTTGTCCTG
GCCAGCGTTTTGGATTTGGCGCGGCTACAACTGGCAGTCCGCACGAAAAA
CGGAGAGAATCGCATTTTACATTCAAAGGACCTATCAACAGGCCAAGCTA
ATGCAGTTGGCTATCTTAGCCACTGGTCTGTTCACGATATCAATGGGTCG
ACCTGCCGGCATACCAATAGAAATGCATACAGTGCACAATAATCAGGAAG
AAACAGCTGACATCGGAGACTCCTCTTAGTTCAGATGGGCATCCAAAATT
ATTACGGCAATCTGAAGGAGAAGTTCTCGACGAGGCTTAAGCGAAAGGAG
GAGGAACCAGCCAAGGCAATAGCCCACCCACCTCGGATGCATAATCTTGG
CGAGGAGATACGTTTACTGGTGCATTCGCAATCCTTTGAAAAGGCCTACA
GTACTGCAGCACCATTTCTTTTCGCCAGTTTGGGGGCGTGGCCGGGCTAT
TGGCTGTTCAGAGGAATGGATTACCATGTTCATCGATCGCACATTCCATT
GCCCATCTATATAAGACAGACCTACTATCAAGCCAAAGTGGTGCAACTTT
TCATTATCATGGCCGGCACATATACCGTTTTCAGAAACGCCAGTCGCTTG
CGTTTGATGAATGCAAATAGAGTGGCGAAGTCTTCTTGAAAGCCTTCAAA
AATCATGCAATTGGATGTCCAAGAACCAGCGTCTTACAAATTTCGGAAAC
AGACCATCGGAAAGTTGAACTTTTAATTTAACAAACACAAAATATAAACA
CAAAAATATATTTTATATTCATTTCCTAAAAAAAAAAAAAAAAAAAAAAA
AAAAAA

IP08610.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:05:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG32299-RB 1206 CG32299-RB 1..1206 173..1378 6030 100 Plus
CG32298-RB 1206 CG32298-RB 1..1206 173..1378 6030 100 Plus
CG32299-RA 575 CG32299-RA 48..575 833..1360 2640 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 05:39:58
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 2389962..2390468 679..173 2505 99.6 Minus
chr3L 24539361 chr3L 2389380..2389666 1119..833 1420 99.7 Minus
chr3L 24539361 chr3L 2389062..2389321 1377..1118 1300 100 Minus
chr3L 24539361 chr3L 2389748..2389903 834..679 780 100 Minus
chr2L 23010047 chr2L 9390357..9390506 1..150 750 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:56:39 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 05:39:56
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 2390483..2390989 679..173 2535 100 Minus
3L 28110227 3L 2389901..2390187 1119..833 1435 100 Minus
3L 28110227 3L 2389578..2389842 1382..1118 1310 99.6 Minus
3L 28110227 3L 2390269..2390424 834..679 780 100 Minus
2L 23513712 2L 9391420..9391569 1..150 750 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:00:17
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 2390483..2390989 679..173 2535 100 Minus
3L 28103327 3L 2389901..2390187 1119..833 1435 100 Minus
3L 28103327 3L 2389578..2389842 1382..1118 1310 99.6 Minus
3L 28103327 3L 2390269..2390424 834..679 780 100 Minus
2L 23513712 2L 9391420..9391569 1..150 750 100 Plus
Blast to na_te.dros performed 2019-03-16 05:39:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dbif\P-element_O 2986 Dbif\P-element_O P_O 2986bp Derived from X71634. 2719..2813 1284..1373 138 65.3 Plus
Stalker 7256 Stalker STALKER 7256bp 6590..6630 1333..1374 117 78.6 Plus
gypsy11 4428 gypsy11 GYPSY11 4428bp 3641..3691 1318..1369 113 71.2 Plus

IP08610.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 05:40:55 Download gff for IP08610.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 2389062..2389319 1120..1377 100 <- Minus
chr3L 2389380..2389664 835..1119 99 <- Minus
chr3L 2389748..2389902 680..834 100 <- Minus
chr3L 2389962..2390474 167..679 98 <- Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:37:24 Download gff for IP08610.complete
Subject Subject Range Query Range Percent Splice Strand
CG32298-RB 1..603 227..829 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:05:47 Download gff for IP08610.complete
Subject Subject Range Query Range Percent Splice Strand
CG32298-RB 1..603 227..829 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 08:28:49 Download gff for IP08610.complete
Subject Subject Range Query Range Percent Splice Strand
CG32298-RB 1..603 227..829 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 15:13:50 Download gff for IP08610.complete
Subject Subject Range Query Range Percent Splice Strand
CG32298-RB 1..603 227..829 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:07:13 Download gff for IP08610.complete
Subject Subject Range Query Range Percent Splice Strand
CG32298-RB 1..603 227..829 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:33:04 Download gff for IP08610.complete
Subject Subject Range Query Range Percent Splice Strand
CG32299-RB 1..1205 173..1377 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:05:47 Download gff for IP08610.complete
Subject Subject Range Query Range Percent Splice Strand
CG32299-RB 1..1205 173..1377 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:28:49 Download gff for IP08610.complete
Subject Subject Range Query Range Percent Splice Strand
CG32298-RB 1..1205 173..1377 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 15:13:50 Download gff for IP08610.complete
Subject Subject Range Query Range Percent Splice Strand
CG32299-RB 1..1205 173..1377 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:07:13 Download gff for IP08610.complete
Subject Subject Range Query Range Percent Splice Strand
CG32298-RB 1..1205 173..1377 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:40:55 Download gff for IP08610.complete
Subject Subject Range Query Range Percent Splice Strand
3L 2389583..2389840 1120..1377 100 <- Minus
3L 2389901..2390185 835..1119 100 <- Minus
3L 2390269..2390423 680..834 100 <- Minus
3L 2390483..2390991 172..679 99 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:40:55 Download gff for IP08610.complete
Subject Subject Range Query Range Percent Splice Strand
3L 2389583..2389840 1120..1377 100 <- Minus
3L 2389901..2390185 835..1119 100 <- Minus
3L 2390269..2390423 680..834 100 <- Minus
3L 2390483..2390991 172..679 99 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:40:55 Download gff for IP08610.complete
Subject Subject Range Query Range Percent Splice Strand
3L 2389583..2389840 1120..1377 100 <- Minus
3L 2389901..2390185 835..1119 100 <- Minus
3L 2390269..2390423 680..834 100 <- Minus
3L 2390483..2390991 172..679 99 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:28:49 Download gff for IP08610.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 2389583..2389840 1120..1377 100 <- Minus
arm_3L 2389901..2390185 835..1119 100 <- Minus
arm_3L 2390269..2390423 680..834 100 <- Minus
arm_3L 2390483..2390991 172..679 99 <- Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:39:24 Download gff for IP08610.complete
Subject Subject Range Query Range Percent Splice Strand
3L 2389583..2389840 1120..1377 100 <- Minus
3L 2389901..2390185 835..1119 100 <- Minus
3L 2390269..2390423 680..834 100 <- Minus
3L 2390483..2390991 172..679 99 <- Minus

IP08610.hyp Sequence

Translation from 172 to 828

> IP08610.hyp
LAPLGKLKINSQKVQLFSMDSLLQKISELFHNFTSPIAAVVYSPKNVENA
QETQTTANQIPEASSQETGKPDSDRTAPDTTEPLTSGDIPTPDVKLQKFR
EQTAPALNYELEFVDFVDRNAPQGLSKKIIDILPYLEVSFLSWPAFWIWR
GYNWQSARKTERIAFYIQRTYQQAKLMQLAILATGLFTISMGRPAGIPIE
MHTVHNNQEETADIGDSS*

IP08610.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:37:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG32298-PB 200 CG32298-PB 1..200 19..218 1040 100 Plus

IP08610.pep Sequence

Translation from 834 to 1238

> IP08610.pep
MGIQNYYGNLKEKFSTRLKRKEEEPAKAIAHPPRMHNLGEEIRLLVHSQS
FEKAYSTAAPFLFASLGAWPGYWLFRGMDYHVHRSHIPLPIYIRQTYYQA
KVVQLFIIMAGTYTVFRNASRLRLMNANRVAKSS*

IP08610.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 12:06:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24866-PA 145 GF24866-PA 1..140 1..131 425 59.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 12:06:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14518-PA 131 GG14518-PA 1..131 1..133 619 88.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 12:06:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15760-PA 137 GH15760-PA 1..110 1..105 267 47.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:01:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG32299-PB 134 CG32299-PB 1..134 1..134 705 100 Plus
CG32299-PA 134 CG32299-PA 1..134 1..134 705 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 12:06:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI12538-PA 134 GI12538-PA 1..131 1..129 326 46.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 12:06:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL24613-PA 116 GL24613-PA 1..116 1..123 332 52 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 12:06:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA16814-PA 116 GA16814-PA 1..116 1..123 332 52 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 12:06:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM14122-PA 133 GM14122-PA 1..131 1..131 658 94.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 12:06:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD13392-PA 133 GD13392-PA 1..131 1..131 671 96.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 12:06:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ16055-PA 131 GJ16055-PA 1..124 1..124 334 46.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 12:06:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK12512-PA 133 GK12512-PA 26..132 19..129 323 54.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 12:06:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21708-PA 132 GE21708-PA 1..132 1..133 623 89.6 Plus