Clone IP08618 Report

Search the DGRC for IP08618

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:86
Well:18
Vector:pOT2
Associated Gene/TranscriptCG32413-RC
Protein status:IP08618.pep: gold
Preliminary Size:711
Sequenced Size:1013

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG32413 2005-01-01 Successful iPCR screen
CG32413 2008-04-29 Release 5.5 accounting
CG32413 2008-08-15 Release 5.9 accounting
CG32413 2008-12-18 5.12 accounting

Clone Sequence Records

IP08618.complete Sequence

1013 bp (1013 high quality bases) assembled on 2005-03-06

GenBank Submission: BT023066

> IP08618.complete
CTCGGAAGGATTGCGTTGTTCTTAACTATAATTTATGTGGTGTTTAAAGC
AATGTTTTTGCGTTGGGTTATTGAAAAGCCCCCCTTTAAATTCGATGACG
ATGAGGAGCACTTTAATGCTACGTTAGCGAAACTACTAAAGCCTCGATCT
GTGGGCAGCAAAGGGCATGCCGAGGTTCAAGATTTCATCGAGACGGAACT
GAAGCGTTTGGATTTCATCACATTAAAGAATGACTTCCAACAAGGAGTCA
ATATTACCAATTTGGTAGGCTTTTGGAATATGAGGGCTAAGTTTTATCTG
ATGCTAACCTGTCACTACGACAGCAAAAAGCCAGAAAATGTGACCACCGA
TGAGTTCCTTGCAGCCGCAGAAGGCGCTGTATCGTGTGCCATTCTTCTTA
ACGTGGCCAAAACATTGAGACAATTTTTAATAGATAGGTGGTCTGAAAAA
AAGTCCGTGGGACTGGCTTTTATCTTCTTCGACGGGCACAATTCCTTAAG
CTCAGATCCTTATGACGAAAATGAACTTTTGGGCGCAACACACTTTATAG
ATGAAGAATTTATACCTTTGCGCGACATGGCTGTTGCAGTAACTCTCAGC
TATATTGGCGCGCCAAATCAAACCTTTTTGAGCTTCTTTGAAGTTACCAA
TGATTTGCACAACCTGATTGCTGACATCGAACAGGATCTCAGAAAATCCG
GAGAACTCGACGACTGTCATGTGTTATTCCAAAAGAAAACACATTACGAC
AAAGATCTGCTTGACGATCATATTGTATTCGACGAACAAGATGTGCCAGT
CATTCATGTGAGTCCACATGAATTTCCAAATGTTCTTTATACGCCAGCGG
ACAATGTCGAGAATCTACACTATCCTACCATTCGCAATATGATCAAAATT
ATTCGCTGTTTTGTGCATGATTTCTATGAAAAGTGGCAATACTTTATGAA
ATGGCGACAAGCTTTTGCAATAAATTATGATTTTTATGATGACTAAAAAA
AAAAAAAAAAAAA

IP08618.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:48:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG32413-RB 1018 CG32413-RB 22..1018 1..997 4985 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 17:58:20
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 5896151..5896618 468..1 2340 100 Minus
chr3L 24539361 chr3L 5895717..5895928 790..579 1015 98.6 Minus
chr3L 24539361 chr3L 5895455..5895660 994..789 955 97.6 Minus
chr3L 24539361 chr3L 5895982..5896093 580..469 560 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:56:40 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 17:58:18
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 5903585..5904052 468..1 2340 100 Minus
3L 28110227 3L 5903151..5903362 790..579 1060 100 Minus
3L 28110227 3L 5902886..5903094 997..789 1045 100 Minus
3L 28110227 3L 5903416..5903527 580..469 560 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:37:39
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 5896685..5897152 468..1 2340 100 Minus
3L 28103327 3L 5896251..5896462 790..579 1060 100 Minus
3L 28103327 3L 5895986..5896194 997..789 1045 100 Minus
3L 28103327 3L 5896516..5896627 580..469 560 100 Minus
Blast to na_te.dros performed 2019-03-16 17:58:19
Subject Length Description Subject Range Query Range Score Percent Strand
Doc2-element 4789 Doc2-element DOC2 4789bp 763..801 299..262 120 82.1 Minus

IP08618.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 17:59:22 Download gff for IP08618.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 5895455..5895658 791..994 97 <- Minus
chr3L 5895717..5895927 580..790 98 <- Minus
chr3L 5895983..5896093 469..579 100 <- Minus
chr3L 5896151..5896618 1..468 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:37:25 Download gff for IP08618.complete
Subject Subject Range Query Range Percent Splice Strand
CG32413-RB 4..997 1..994 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:18:10 Download gff for IP08618.complete
Subject Subject Range Query Range Percent Splice Strand
CG32413-RC 1..943 52..994 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:05:12 Download gff for IP08618.complete
Subject Subject Range Query Range Percent Splice Strand
CG32413-RC 1..945 52..996 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:02:26 Download gff for IP08618.complete
Subject Subject Range Query Range Percent Splice Strand
CG32413-RB 4..997 1..994 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:24:46 Download gff for IP08618.complete
Subject Subject Range Query Range Percent Splice Strand
CG32413-RC 1..945 52..996 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:17:58 Download gff for IP08618.complete
Subject Subject Range Query Range Percent Splice Strand
CG32413-RB 4..997 1..994 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:18:10 Download gff for IP08618.complete
Subject Subject Range Query Range Percent Splice Strand
CG32413-RC 1..994 1..994 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:05:12 Download gff for IP08618.complete
Subject Subject Range Query Range Percent Splice Strand
CG32413-RC 1..994 1..994 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:02:26 Download gff for IP08618.complete
Subject Subject Range Query Range Percent Splice Strand
CG32413-RB 4..997 1..994 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:24:46 Download gff for IP08618.complete
Subject Subject Range Query Range Percent Splice Strand
CG32413-RC 1..994 1..994 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:59:22 Download gff for IP08618.complete
Subject Subject Range Query Range Percent Splice Strand
3L 5902889..5903092 791..994 100 <- Minus
3L 5903151..5903361 580..790 100 <- Minus
3L 5903417..5903527 469..579 100 <- Minus
3L 5903585..5904052 1..468 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:59:22 Download gff for IP08618.complete
Subject Subject Range Query Range Percent Splice Strand
3L 5902889..5903092 791..994 100 <- Minus
3L 5903151..5903361 580..790 100 <- Minus
3L 5903417..5903527 469..579 100 <- Minus
3L 5903585..5904052 1..468 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:59:22 Download gff for IP08618.complete
Subject Subject Range Query Range Percent Splice Strand
3L 5902889..5903092 791..994 100 <- Minus
3L 5903151..5903361 580..790 100 <- Minus
3L 5903417..5903527 469..579 100 <- Minus
3L 5903585..5904052 1..468 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:05:12 Download gff for IP08618.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 5895989..5896192 791..994 100 <- Minus
arm_3L 5896251..5896461 580..790 100 <- Minus
arm_3L 5896517..5896627 469..579 100 <- Minus
arm_3L 5896685..5897152 1..468 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:38:18 Download gff for IP08618.complete
Subject Subject Range Query Range Percent Splice Strand
3L 5896251..5896461 580..790 100 <- Minus
3L 5896517..5896627 469..579 100 <- Minus
3L 5896685..5897152 1..468 100   Minus
3L 5895989..5896192 791..994 100 <- Minus

IP08618.pep Sequence

Translation from 0 to 995

> IP08618.pep
LGRIALFLTIIYVVFKAMFLRWVIEKPPFKFDDDEEHFNATLAKLLKPRS
VGSKGHAEVQDFIETELKRLDFITLKNDFQQGVNITNLVGFWNMRAKFYL
MLTCHYDSKKPENVTTDEFLAAAEGAVSCAILLNVAKTLRQFLIDRWSEK
KSVGLAFIFFDGHNSLSSDPYDENELLGATHFIDEEFIPLRDMAVAVTLS
YIGAPNQTFLSFFEVTNDLHNLIADIEQDLRKSGELDDCHVLFQKKTHYD
KDLLDDHIVFDEQDVPVIHVSPHEFPNVLYTPADNVENLHYPTIRNMIKI
IRCFVHDFYEKWQYFMKWRQAFAINYDFYDD*

IP08618.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 16:27:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10436-PA 317 GF10436-PA 1..295 19..314 767 48.3 Plus
Dana\GF10437-PA 327 GF10437-PA 2..307 1..306 650 43.8 Plus
Dana\GF10438-PA 356 GF10438-PA 41..321 30..294 429 37.2 Plus
Dana\GF10348-PA 357 GF10348-PA 58..345 33..308 306 31.2 Plus
Dana\GF24557-PA 349 GF24557-PA 42..309 38..308 276 31.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 16:27:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14103-PA 268 GG14103-PA 1..206 18..262 876 68.2 Plus
Dere\GG14104-PA 344 GG14104-PA 33..332 30..311 474 37.4 Plus
Dere\GG16120-PA 390 GG16120-PA 96..383 33..308 348 33.2 Plus
Dere\GG13925-PA 341 GG13925-PA 58..330 33..308 308 31.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 16:27:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16890-PA 267 GH16890-PA 5..265 10..263 531 42.4 Plus
Dgri\GH16891-PA 314 GH16891-PA 6..302 33..311 461 36.9 Plus
Dgri\GH14553-PA 362 GH14553-PA 61..347 34..308 361 34 Plus
Dgri\GH16886-PA 175 GH16886-PA 1..152 92..245 352 44.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:44:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG32413-PB 332 CG32413-PB 2..332 1..331 1763 100 Plus
QC-PA 340 CG32412-PA 36..328 33..311 462 37.4 Plus
isoQC-PA 352 CG5976-PA 58..344 34..308 348 33.3 Plus
isoQC-PB 354 CG5976-PB 60..346 34..308 348 33.3 Plus
CG6168-PC 342 CG6168-PC 59..330 34..308 275 29.4 Plus
CG6168-PB 342 CG6168-PB 59..330 34..308 275 29.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 16:27:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI12033-PA 273 GI12033-PA 28..260 26..260 502 43.8 Plus
Dmoj\GI12029-PA 234 GI12029-PA 5..233 32..263 457 41.8 Plus
Dmoj\GI13400-PA 378 GI13400-PA 83..369 34..308 321 31.4 Plus
Dmoj\GI12035-PA 205 GI12035-PA 1..193 131..311 274 35.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 16:27:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL21387-PA 265 GL21387-PA 2..263 1..265 560 44.6 Plus
Dper\GL22833-PA 368 GL22833-PA 54..330 33..308 332 33.7 Plus
Dper\GL12792-PA 357 GL12792-PA 66..349 37..308 323 32.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 16:27:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA16885-PA 321 GA16885-PA 2..310 1..311 708 45.5 Plus
Dpse\GA16884-PA 357 GA16884-PA 47..355 31..329 467 36.1 Plus
Dpse\GA19273-PA 357 GA19273-PA 66..349 37..308 330 32.6 Plus
Dpse\GA19404-PA 364 GA19404-PA 50..330 29..308 321 32.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 16:27:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM13887-PA 269 GM13887-PA 1..215 18..271 1011 77.6 Plus
Dsec\GM13888-PA 340 GM13888-PA 33..328 30..311 471 37 Plus
Dsec\GM22298-PA 354 GM22298-PA 59..346 33..308 344 33.2 Plus
Dsec\GM24759-PA 225 GM24759-PA 4..209 83..297 218 32.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 16:27:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD13169-PA 275 GD13169-PA 1..275 18..331 1363 82.5 Plus
Dsim\GD13170-PA 340 GD13170-PA 33..338 30..329 471 36.4 Plus
Dsim\GD14891-PA 391 GD14891-PA 96..383 33..308 347 33.6 Plus
Dsim\GD12810-PA 343 GD12810-PA 58..330 33..308 299 31 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 16:27:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13304-PA 330 GJ13304-PA 17..322 3..308 660 43.5 Plus
Dvir\GJ13298-PA 278 GJ13298-PA 3..276 32..308 579 44.4 Plus
Dvir\GJ13305-PA 342 GJ13305-PA 34..330 33..311 480 36.4 Plus
Dvir\GJ11525-PA 359 GJ11525-PA 63..351 33..308 341 33.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 16:27:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17529-PA 343 GK17529-PA 45..335 33..308 496 39 Plus
Dwil\GK12295-PA 357 GK12295-PA 65..352 33..308 349 32.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 16:27:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20525-PA 214 GE20525-PA 1..207 18..262 817 65 Plus
Dyak\GE20526-PA 344 GE20526-PA 33..342 30..329 467 35.9 Plus
Dyak\GE19688-PA 351 GE19688-PA 58..344 34..308 341 33 Plus
Dyak\GE20221-PA 344 GE20221-PA 58..331 33..308 280 29.9 Plus

IP08618.hyp Sequence

Translation from 0 to 993

> IP08618.hyp
LGRIALFLTIIYVVFKAMFLRWVIEKPPFKFDDDEEHFNATLAKLLKPRS
VGSKGHAEVQDFIETELKRLDFITLKNDFQQGVNITNLVGFWNMRAKFYL
MLTCHYDSKKPENVTTDEFLAAAEGAVSCAILLNVAKTLRQFLIDRWSEK
KSVGLAFIFFDGHNSLSSDPYDENELLGATHFIDEEFIPLRDMAVAVTLS
YIGAPNQTFLSFFEVTNDLHNLIADIEQDLRKSGELDDCHVLFQKKTHYD
KDLLDDHIVFDEQDVPVIHVSPHEFPNVLYTPADNVENLHYPTIRNMIKI
IRCFVHDFYEKWQYFMKWRQAFAINYDFYDD

IP08618.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 11:55:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG32413-PC 314 CG32413-PC 1..314 18..331 1683 100 Plus
QC-PA 340 CG32412-PA 36..328 33..311 462 37.4 Plus
isoQC-PA 352 CG5976-PA 58..344 34..308 348 33.3 Plus
isoQC-PB 354 CG5976-PB 60..346 34..308 348 33.3 Plus
CG6168-PC 342 CG6168-PC 59..330 34..308 275 29.4 Plus