Clone IP08657 Report

Search the DGRC for IP08657

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:86
Well:57
Vector:pOT2
Associated Gene/TranscriptCG4480-RB
Protein status:IP08657.pep: gold
Preliminary Size:725
Sequenced Size:1023

Clone Sequence Records

IP08657.complete Sequence

1023 bp assembled on 2009-04-22

GenBank Submission: BT082064.1

> IP08657.complete
AAATTATTGGTGTAAGTAAATGTTTCGTTTGTTGGCCGGAACTGAGCCAG
AATTATCCTCCGGCAATCTCCAAGAGCCCTTAAGTTTACGCGATGAGCTC
CGCTTCCGTAGACTCGGCTTACATCATCATTCTCCCACGGACTTCCTACG
TTCGCAATGGCAGTCTGGGCCGAAATCTTCTATTTTCTTGGCTTACCGAT
GGGCATTAGGCGGATTCTTCGGTGCCGGCGTGGTCGGTTGTATTTCTGAG
TACTACAACCACGGAAATTTTTTTATATTTTTGACCAACTGGGGATTTGT
ATTGTGTGGCGTTACCAGTATTGCCGGAGCAATACTTGTGACTATCTATC
ACTACAAGCCGGAAACCTGGGTTCCCCCGAGCGGCTGGATAAAGGTTTAT
TGGGCTTGCTATTGGACCAACATCACATTGGCGTGCTTAATTGCATTCGC
CTATTGGACAGCCATATATCCCAAGGATCGGGTGTTAACTAATCCGACTC
GGGTTTCCGATTTGTATAACATATGGACTCACTTGCTGCCACCTATTTTC
TTCACCATCGATAACTTTCTGGTGGCGCAACCAGCTCGACTTCTTCACTT
TGTTTATCCACTGGCATTCCTCCATACTTACGGAATTTTCGCAATACTAT
TCTATGCCCTGGGCGGTCGTAACTTGGACGGAAAACACTATATATATCCG
TTTTTGAATTTTGCTAGGCCAAAGATAGTTTTAAAAACCGTAACATATCT
TAGTATAGTTCTGGTGTCCTTGTCCAGTCTAGAATATGGAGTCTATCGAC
TACGCAATTTCATAGCACGCAAGCTGGGGAAACTTTAGTGATGCTTTTGA
TGCTGTGCTGCCTTTCTCATAACTGCATTAAAGTCATGCGTGCCGAATCT
TCAGAAACAAGCATACAGACAGCAAAATGGTTAGTTTGCAGAGAATATTA
GCGTTCCGACTACGAGACACCCTCTAAAAAGGTAATAAATAATAAATAAA
TTTGTCAAAAAAAAAAAAAAAAA

IP08657.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:22:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG4480.b 1052 CG4480.b 47..1052 1..1006 5030 100 Plus
CG4480.a 1422 CG4480.a 47..1028 1..982 4910 100 Plus
CG4480-RA 805 CG4480-RA 126..801 1..676 3380 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 06:59:06
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 14869595..14869925 1006..676 1655 100 Minus
chr2L 23010047 chr2L 14869976..14870281 676..371 1500 99.3 Minus
chr2L 23010047 chr2L 14870347..14870560 371..158 1025 98.6 Minus
chr2L 23010047 chr2L 14870614..14870770 157..1 785 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:56:48 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 06:59:04
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 14870800..14871131 1007..676 1660 100 Minus
2L 23513712 2L 14871182..14871487 676..371 1530 100 Minus
2L 23513712 2L 14871553..14871766 371..158 1070 100 Minus
2L 23513712 2L 14871820..14871976 157..1 785 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:06:56
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 14870800..14871131 1007..676 1660 100 Minus
2L 23513712 2L 14871182..14871487 676..371 1530 100 Minus
2L 23513712 2L 14871553..14871766 371..158 1070 100 Minus
2L 23513712 2L 14871820..14871976 157..1 785 100 Minus
Blast to na_te.dros performed on 2019-03-16 06:59:04 has no hits.

IP08657.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 07:00:12 Download gff for IP08657.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 14869620..14869925 676..981 100 <- Minus
chr2L 14869977..14870280 372..675 99 <- Minus
chr2L 14870347..14870560 158..371 98 <- Minus
chr2L 14870614..14870770 1..157 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 17:50:50 Download gff for IP08657.complete
Subject Subject Range Query Range Percent Splice Strand
CG4480-RA 1..660 20..679 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 13:45:51 Download gff for IP08657.complete
Subject Subject Range Query Range Percent Splice Strand
CG4480-RC 1..819 20..838 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 08:21:14 Download gff for IP08657.complete
Subject Subject Range Query Range Percent Splice Strand
CG4480-RB 1..819 20..838 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:27:03 Download gff for IP08657.complete
Subject Subject Range Query Range Percent Splice Strand
CG4480-RB 1..819 20..838 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-04-22 13:44:41 Download gff for IP08657.complete
Subject Subject Range Query Range Percent Splice Strand
CG4480-RA 47..725 1..679 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 13:45:51 Download gff for IP08657.complete
Subject Subject Range Query Range Percent Splice Strand
CG4480-RC 47..1052 1..1006 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:21:14 Download gff for IP08657.complete
Subject Subject Range Query Range Percent Splice Strand
CG4480-RC 47..1052 1..1006 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:27:03 Download gff for IP08657.complete
Subject Subject Range Query Range Percent Splice Strand
CG4480-RC 47..1052 1..1006 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:00:12 Download gff for IP08657.complete
Subject Subject Range Query Range Percent Splice Strand
2L 14870801..14871131 676..1006 100 <- Minus
2L 14871183..14871486 372..675 100 <- Minus
2L 14871553..14871766 158..371 100 <- Minus
2L 14871820..14871976 1..157 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:00:12 Download gff for IP08657.complete
Subject Subject Range Query Range Percent Splice Strand
2L 14870801..14871131 676..1006 100 <- Minus
2L 14871183..14871486 372..675 100 <- Minus
2L 14871553..14871766 158..371 100 <- Minus
2L 14871820..14871976 1..157 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:00:12 Download gff for IP08657.complete
Subject Subject Range Query Range Percent Splice Strand
2L 14870801..14871131 676..1006 100 <- Minus
2L 14871183..14871486 372..675 100 <- Minus
2L 14871553..14871766 158..371 100 <- Minus
2L 14871820..14871976 1..157 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:21:14 Download gff for IP08657.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 14871553..14871766 158..371 100 <- Minus
arm_2L 14871820..14871976 1..157 100   Minus
arm_2L 14871183..14871486 372..675 100 <- Minus
arm_2L 14870801..14871131 676..1006 100 <- Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:31:36 Download gff for IP08657.complete
Subject Subject Range Query Range Percent Splice Strand
2L 14871820..14871976 1..157 100   Minus
2L 14870801..14871131 676..1006 100 <- Minus
2L 14871183..14871486 372..675 100 <- Minus
2L 14871553..14871766 158..371 100 <- Minus

IP08657.hyp Sequence

Translation from 19 to 837

> IP08657.hyp
MFRLLAGTEPELSSGNLQEPLSLRDELRFRRLGLHHHSPTDFLRSQWQSG
PKSSIFLAYRWALGGFFGAGVVGCISEYYNHGNFFIFLTNWGFVLCGVTS
IAGAILVTIYHYKPETWVPPSGWIKVYWACYWTNITLACLIAFAYWTAIY
PKDRVLTNPTRVSDLYNIWTHLLPPIFFTIDNFLVAQPARLLHFVYPLAF
LHTYGIFAILFYALGGRNLDGKHYIYPFLNFARPKIVLKTVTYLSIVLVS
LSSLEYGVYRLRNFIARKLGKL*

IP08657.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 11:55:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG4480-PC 272 CG4480-PC 1..272 1..272 1474 100 Plus
CG4480-PB 272 CG4480-PB 1..272 1..272 1474 100 Plus
CG9555-PC 275 CG9555-PC 6..256 18..271 536 40.2 Plus
CG9555-PA 275 CG9555-PA 6..256 18..271 536 40.2 Plus
CG17906-PA 275 CG17906-PA 13..256 23..271 496 36.9 Plus

IP08657.pep Sequence

Translation from 19 to 837

> IP08657.pep
MFRLLAGTEPELSSGNLQEPLSLRDELRFRRLGLHHHSPTDFLRSQWQSG
PKSSIFLAYRWALGGFFGAGVVGCISEYYNHGNFFIFLTNWGFVLCGVTS
IAGAILVTIYHYKPETWVPPSGWIKVYWACYWTNITLACLIAFAYWTAIY
PKDRVLTNPTRVSDLYNIWTHLLPPIFFTIDNFLVAQPARLLHFVYPLAF
LHTYGIFAILFYALGGRNLDGKHYIYPFLNFARPKIVLKTVTYLSIVLVS
LSSLEYGVYRLRNFIARKLGKL*

IP08657.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 17:19:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15003-PA 316 GF15003-PA 4..228 1..227 724 56.8 Plus
Dana\GF22683-PA 275 GF22683-PA 6..247 18..262 472 38.5 Plus
Dana\GF22686-PA 273 GF22686-PA 11..247 21..262 450 37.2 Plus
Dana\GF22137-PA 320 GF22137-PA 11..263 23..271 365 31.3 Plus
Dana\GF22126-PA 275 GF22126-PA 10..261 22..267 352 33.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 17:19:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24237-PA 219 GG24237-PA 1..219 1..219 999 90 Plus
Dere\GG25322-PA 275 GG25322-PA 6..247 18..262 503 40.5 Plus
Dere\GG25323-PA 271 GG25323-PA 11..243 21..262 430 36.4 Plus
Dere\GG24042-PA 321 GG24042-PA 11..260 23..268 345 31.2 Plus
Dere\GG24041-PA 275 GG24041-PA 10..261 22..267 338 30.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 17:19:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH10829-PA 272 GH10829-PA 7..271 8..272 743 54.7 Plus
Dgri\GH22258-PA 277 GH22258-PA 3..256 11..271 442 35.2 Plus
Dgri\GH25087-PA 303 GH25087-PA 29..282 11..271 441 35.2 Plus
Dgri\GH25119-PA 326 GH25119-PA 11..260 23..268 400 34.7 Plus
Dgri\GH25118-PA 276 GH25118-PA 11..262 23..267 281 29.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:06:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG4480-PC 272 CG4480-PC 1..272 1..272 1474 100 Plus
CG4480-PB 272 CG4480-PB 1..272 1..272 1474 100 Plus
CG9555-PC 275 CG9555-PC 6..256 18..271 536 40.2 Plus
CG9555-PA 275 CG9555-PA 6..256 18..271 536 40.2 Plus
CG17906-PA 275 CG17906-PA 13..256 23..271 496 36.9 Plus
CG13101-PB 318 CG13101-PB 14..263 23..268 378 31.2 Plus
CG13101-PA 318 CG13101-PA 14..263 23..268 378 31.2 Plus
rost-PC 275 CG9552-PC 10..261 22..267 353 30.1 Plus
rost-PB 275 CG9552-PB 10..261 22..267 353 30.1 Plus
rost-PA 275 CG9552-PA 10..261 22..267 353 30.1 Plus
CG43778-PD 451 CG43778-PD 19..260 34..269 179 24.6 Plus
CG43778-PA 963 CG43778-PA 531..772 34..269 179 24.6 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 17:19:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI17453-PA 274 GI17453-PA 14..257 23..271 473 38.6 Plus
Dmoj\GI17340-PA 223 GI17340-PA 22..222 18..218 437 39.3 Plus
Dmoj\GI11979-PA 275 GI11979-PA 11..261 23..267 294 31 Plus
Dmoj\GI11990-PA 292 GI11990-PA 12..229 23..267 276 29.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 17:19:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL25740-PA 273 GL25740-PA 18..272 18..272 797 57.3 Plus
Dper\GL26234-PA 274 GL26234-PA 6..256 18..271 495 40.1 Plus
Dper\GL26235-PA 264 GL26235-PA 11..261 21..272 485 37.1 Plus
Dper\GL25545-PA 321 GL25545-PA 11..263 23..271 355 31.3 Plus
Dper\GL11487-PA 266 GL11487-PA 10..261 22..267 343 32.8 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 17:19:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA18212-PA 273 GA18212-PA 18..272 18..272 802 57.6 Plus
Dpse\GA21876-PA 274 GA21876-PA 6..256 18..271 495 40.1 Plus
Dpse\GA28091-PA 264 GA28091-PA 11..261 21..272 484 38.5 Plus
Dpse\GA12046-PA 321 GA12046-PA 11..263 23..271 355 31.3 Plus
Dpse\GA24744-PA 266 GA24744-PA 10..261 22..267 346 33.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 17:19:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM14654-PA 219 GM14654-PA 1..219 1..219 1120 96.8 Plus
Dsec\GM17325-PA 275 GM17325-PA 6..256 18..271 494 39.1 Plus
Dsec\GM17336-PA 275 GM17336-PA 13..256 23..271 482 37.3 Plus
Dsec\GM12606-PA 321 GM12606-PA 11..260 23..268 354 30.9 Plus
Dsec\GM12594-PA 275 GM12594-PA 10..261 22..267 329 30.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 17:19:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD21983-PA 219 GD21983-PA 1..219 1..219 1130 97.7 Plus
Dsim\GD23580-PA 275 GD23580-PA 6..256 18..271 504 39.8 Plus
Dsim\GD23581-PA 424 GD23581-PA 13..220 23..233 404 37.1 Plus
Dsim\GD22370-PA 321 GD22370-PA 11..260 23..268 355 31.2 Plus
Dsim\GD22369-PA 275 GD22369-PA 10..261 22..267 330 30.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 17:19:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ16087-PA 217 GJ16087-PA 1..216 4..218 582 52.8 Plus
Dvir\GJ14352-PA 277 GJ14352-PA 13..256 23..271 472 37.3 Plus
Dvir\GJ14118-PA 322 GJ14118-PA 11..260 23..268 383 33.2 Plus
Dvir\GJ14112-PA 275 GJ14112-PA 11..261 23..267 274 29.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 17:19:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK18074-PA 268 GK18074-PA 2..267 7..272 652 47.7 Plus
Dwil\GK23992-PA 263 GK23992-PA 16..257 26..271 445 33.6 Plus
Dwil\GK15331-PA 271 GK15331-PA 13..251 23..271 444 36.5 Plus
Dwil\GK14787-PA 325 GK14787-PA 11..259 23..267 367 32.9 Plus
Dwil\GK14786-PA 275 GK14786-PA 12..261 24..267 314 31.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 17:19:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24809-PA 219 GE24809-PA 1..219 1..219 1026 86.8 Plus
Dyak\GE18817-PA 275 GE18817-PA 6..256 18..271 507 39.5 Plus
Dyak\GE18818-PA 275 GE18818-PA 12..256 22..271 474 36.8 Plus
Dyak\GE10665-PA 321 GE10665-PA 11..260 23..268 359 31.2 Plus
Dyak\GE10654-PA 275 GE10654-PA 10..261 22..267 334 31.2 Plus