Clone IP08705 Report

Search the DGRC for IP08705

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:87
Well:5
Vector:pOT2
Associated Gene/TranscriptCG10638-RB
Protein status:IP08705.pep: gold
Preliminary Size:687
Sequenced Size:1190

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG32101 2005-01-01 Successful iPCR screen
obsolete?_CG32101 2008-04-29 Stopped prior to 5.5

Clone Sequence Records

IP08705.complete Sequence

1190 bp assembled on 2010-08-02

GenBank Submission: BT125073.1

> IP08705.complete
ATTTCCTTATTTATTCTTGATTTAAACGTGCAAAATGAAGCTCGCTCCGA
CTGTTAAGCTAAACAATGGCTACGAGATGCCAATTCTGGGCCTAGGAACC
TACAATTTAAAGAAGTCTCGCTGTGAGGCTGCCGTGTGCCACGCCCTCGA
AATGGGCTATCGGCATATAGACACCGCATATCTGTACAGGAATGAAGGCA
TTATAGGCAAGGTTTTAGCTAAACTTATTGGCGACCAGAAACTGAAACGC
GAACAGGTGTTTCTGGTCACAAAGCTGTGGGACATATACCACGAACCCAA
GATGGTGAAATACGCCTGTGATATGCAATTAAAGCTACTGGGCGTGGACT
ATATAGATCTATATCTGATGCATTCGCCGGTGGGCGTGGACTACATCTCT
GATGAAGATCTGATGCCCCACGAGAATGGCCAGCTGAGGACCAACGATGT
GGACTATGTGGACACCTACAGAAGTATGGAGCAACTGGTGCATCTGGGGC
TGGTGCGCAGCTTGGGATTGTCCAACTTTAATGCCAATCAGCTGAAGAGA
TTACTGGAAAACTGCCAAATCAAGCCGGCAAACCTACAAATAGAATGTCA
TCCGGAATTGGTGCAAGTCCCATTAATTGAGCTCTGTAAATTTCACAATA
TCACCGTGGTTGCCTATTCGCCACTGGGGCGTCCCAAAGCCTGCAATCCG
CTGCCCGATTACTACACTGATTCCAAGCTACTGGCGTTGGCAGCGAAATA
CGGCAAGACACCAGCTCAAATCATCCTAAGATACTTGATCGATATTGGCA
CGGTACCTATTCCAAAAGCTGCCCAGCGAGCCCATCTCGTAGAGAATCTG
GATATATTTGATTTCCACCTAACGCCGGAGGAGTTGCTCCAAATGAAGAC
CTTTAATACAGGGCGCAGAATCTGGAAATTCGATAAAGCGAAGAATCATC
AGTACTATCCGTACTAGCAAGAGATATTTAGTGTTCGGAAAAAAAGTGTA
ACTATGTAAATGTATAAGATAGAATCTCGTTAGATAGTTTAGTTTTTACG
TTAGTTTTTTTTTAGTACAATATTACAATGTTATAAAATGTCATCATATC
AATCGTTATCATATATAAATATACTATATTTTGTGCTAGAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

IP08705.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-16 12:48:25
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 12490411..12490763 1139..787 1705 98.9 Minus
chr3L 24539361 chr3L 12490822..12491164 787..445 1700 99.7 Minus
chr3L 24539361 chr3L 12491237..12491408 444..273 845 99.4 Minus
chr3L 24539361 chr3L 12491481..12491648 274..107 825 99.4 Minus
chr3L 24539361 chr3L 12491767..12491876 110..1 535 99.1 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 12:48:23
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 12499800..12500153 1140..787 1770 100 Minus
3L 28110227 3L 12500212..12500554 787..445 1715 100 Minus
3L 28110227 3L 12500631..12500802 444..273 860 100 Minus
3L 28110227 3L 12500875..12501042 274..107 840 100 Minus
3L 28110227 3L 12501161..12501270 110..1 535 99.1 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:58:27
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 12492900..12493253 1140..787 1770 100 Minus
3L 28103327 3L 12493312..12493654 787..445 1715 100 Minus
3L 28103327 3L 12493731..12493902 444..273 860 100 Minus
3L 28103327 3L 12493975..12494142 274..107 840 100 Minus
3L 28103327 3L 12494261..12494370 110..1 535 99 Minus
Blast to na_te.dros performed on 2019-03-16 12:48:23 has no hits.

IP08705.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 12:49:32 Download gff for IP08705.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 12490411..12490762 788..1139 98 <- Minus
chr3L 12490822..12491164 445..787 99 <- Minus
chr3L 12491237..12491406 275..444 99 <- Minus
chr3L 12491481..12491648 107..274 99 <- Minus
chr3L 12491771..12491876 1..106 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-08-02 10:17:54 Download gff for IP08705.complete
Subject Subject Range Query Range Percent Splice Strand
CG10638-RB 1..933 35..967 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 13:39:20 Download gff for IP08705.complete
Subject Subject Range Query Range Percent Splice Strand
CG10638-RB 1..933 35..967 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 15:29:09 Download gff for IP08705.complete
Subject Subject Range Query Range Percent Splice Strand
CG10638-RB 1..933 35..967 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:56:12 Download gff for IP08705.complete
Subject Subject Range Query Range Percent Splice Strand
CG10638-RB 1..933 35..967 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 10:17:54 Download gff for IP08705.complete
Subject Subject Range Query Range Percent Splice Strand
CG10638-RB 42..1008 1..967 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 13:39:20 Download gff for IP08705.complete
Subject Subject Range Query Range Percent Splice Strand
CG10638-RB 42..1180 1..1139 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:29:09 Download gff for IP08705.complete
Subject Subject Range Query Range Percent Splice Strand
CG10638-RB 42..1180 1..1139 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:56:12 Download gff for IP08705.complete
Subject Subject Range Query Range Percent Splice Strand
CG10638-RB 42..1180 1..1139 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 12:49:32 Download gff for IP08705.complete
Subject Subject Range Query Range Percent Splice Strand
3L 12499801..12500152 788..1139 100 <- Minus
3L 12500212..12500554 445..787 100 <- Minus
3L 12500631..12500800 275..444 100 <- Minus
3L 12500875..12501042 107..274 100 <- Minus
3L 12501165..12501270 1..106 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 12:49:32 Download gff for IP08705.complete
Subject Subject Range Query Range Percent Splice Strand
3L 12499801..12500152 788..1139 100 <- Minus
3L 12500212..12500554 445..787 100 <- Minus
3L 12500631..12500800 275..444 100 <- Minus
3L 12500875..12501042 107..274 100 <- Minus
3L 12501165..12501270 1..106 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 12:49:32 Download gff for IP08705.complete
Subject Subject Range Query Range Percent Splice Strand
3L 12499801..12500152 788..1139 100 <- Minus
3L 12500212..12500554 445..787 100 <- Minus
3L 12500631..12500800 275..444 100 <- Minus
3L 12500875..12501042 107..274 100 <- Minus
3L 12501165..12501270 1..106 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:29:09 Download gff for IP08705.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 12492901..12493252 788..1139 100 <- Minus
arm_3L 12493312..12493654 445..787 100 <- Minus
arm_3L 12493731..12493900 275..444 100 <- Minus
arm_3L 12493975..12494142 107..274 100 <- Minus
arm_3L 12494265..12494370 1..106 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:42:28 Download gff for IP08705.complete
Subject Subject Range Query Range Percent Splice Strand
3L 12494265..12494370 1..106 100   Minus
3L 12492901..12493252 788..1139 100 <- Minus
3L 12493312..12493654 445..787 100 <- Minus
3L 12493731..12493900 275..444 100 <- Minus
3L 12493975..12494142 107..274 100 <- Minus

IP08705.hyp Sequence

Translation from 34 to 966

> IP08705.hyp
MKLAPTVKLNNGYEMPILGLGTYNLKKSRCEAAVCHALEMGYRHIDTAYL
YRNEGIIGKVLAKLIGDQKLKREQVFLVTKLWDIYHEPKMVKYACDMQLK
LLGVDYIDLYLMHSPVGVDYISDEDLMPHENGQLRTNDVDYVDTYRSMEQ
LVHLGLVRSLGLSNFNANQLKRLLENCQIKPANLQIECHPELVQVPLIEL
CKFHNITVVAYSPLGRPKACNPLPDYYTDSKLLALAAKYGKTPAQIILRY
LIDIGTVPIPKAAQRAHLVENLDIFDFHLTPEELLQMKTFNTGRRIWKFD
KAKNHQYYPY*

IP08705.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 05:52:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG10638-PB 310 CG10638-PB 1..310 1..310 1646 100 Plus
CG10638-PD 317 CG10638-PD 1..313 1..310 900 53.7 Plus
CG10638-PA 317 CG10638-PA 1..313 1..310 900 53.7 Plus
CG10863-PA 316 CG10863-PA 6..312 5..310 791 48.2 Plus
CG9436-PA 311 CG9436-PA 4..307 3..310 774 46.8 Plus

IP08705.pep Sequence

Translation from 34 to 966

> IP08705.pep
MKLAPTVKLNNGYEMPILGLGTYNLKKSRCEAAVCHALEMGYRHIDTAYL
YRNEGIIGKVLAKLIGDQKLKREQVFLVTKLWDIYHEPKMVKYACDMQLK
LLGVDYIDLYLMHSPVGVDYISDEDLMPHENGQLRTNDVDYVDTYRSMEQ
LVHLGLVRSLGLSNFNANQLKRLLENCQIKPANLQIECHPELVQVPLIEL
CKFHNITVVAYSPLGRPKACNPLPDYYTDSKLLALAAKYGKTPAQIILRY
LIDIGTVPIPKAAQRAHLVENLDIFDFHLTPEELLQMKTFNTGRRIWKFD
KAKNHQYYPY*

IP08705.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 17:29:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24013-PA 254 GF24013-PA 25..254 81..310 946 74.8 Plus
Dana\GF10249-PA 317 GF10249-PA 7..313 5..310 805 48.2 Plus
Dana\GF13790-PA 311 GF13790-PA 4..307 3..310 796 48.1 Plus
Dana\GF24014-PA 313 GF24014-PA 12..309 9..310 784 47.5 Plus
Dana\GF10250-PA 320 GF10250-PA 7..313 5..310 730 44.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 17:29:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG13822-PA 310 GG13822-PA 1..310 1..310 1549 91.9 Plus
Dere\GG13823-PA 296 GG13823-PA 5..292 26..310 800 50.3 Plus
Dere\GG13825-PA 299 GG13825-PA 8..295 26..310 795 49.7 Plus
Dere\GG10801-PA 311 GG10801-PA 5..307 4..310 793 47.6 Plus
Dere\GG14235-PA 316 GG14235-PA 6..312 5..310 791 47.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 17:29:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15710-PA 317 GH15710-PA 6..313 4..310 801 49 Plus
Dgri\GH20139-PA 311 GH20139-PA 3..307 2..310 794 48.2 Plus
Dgri\GH16848-PA 385 GH16848-PA 36..343 3..310 779 43.8 Plus
Dgri\GH16631-PA 318 GH16631-PA 6..314 5..310 618 43.1 Plus
Dgri\GH16629-PA 321 GH16629-PA 3..312 4..310 614 39.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:44:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG10638-PB 310 CG10638-PB 1..310 1..310 1646 100 Plus
CG10638-PD 317 CG10638-PD 1..313 1..310 900 53.7 Plus
CG10638-PA 317 CG10638-PA 1..313 1..310 900 53.7 Plus
CG10863-PA 316 CG10863-PA 6..312 5..310 791 48.2 Plus
ARY-PD 384 CG40064-PD 37..344 3..310 780 47.4 Plus
CG9436-PA 311 CG9436-PA 4..307 3..310 774 46.8 Plus
CG12766-PA 320 CG12766-PA 10..313 8..310 741 46.1 Plus
ARY-PC 366 CG40064-PC 41..326 25..310 700 46.5 Plus
CG6084-PD 316 CG6084-PD 4..312 5..310 655 44.1 Plus
CG6084-PA 316 CG6084-PA 4..311 5..310 642 42.9 Plus
CG6084-PB 350 CG6084-PB 37..346 4..310 642 43.3 Plus
CG6084-PC 350 CG6084-PC 37..345 4..310 629 42.1 Plus
CG2767-PA 329 CG2767-PA 10..309 10..299 589 41.3 Plus
CG6083-PA 322 CG6083-PA 4..314 5..310 568 38.1 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 17:29:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI13068-PA 317 GI13068-PA 1..313 1..310 917 53.7 Plus
Dmoj\GI12765-PA 317 GI12765-PA 9..313 7..310 831 49.8 Plus
Dmoj\GI13069-PA 384 GI13069-PA 37..344 3..310 802 47.1 Plus
Dmoj\GI20232-PA 311 GI20232-PA 3..307 2..310 799 47.9 Plus
Dmoj\GI11589-PA 318 GI11589-PA 6..314 5..310 632 44.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 17:29:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL24949-PA 440 GL24949-PA 155..436 32..310 829 53.9 Plus
Dper\GL16200-PA 317 GL16200-PA 7..313 5..310 803 48.2 Plus
Dper\GL15622-PA 379 GL15622-PA 36..343 3..310 796 47.4 Plus
Dper\GL10976-PA 311 GL10976-PA 4..307 3..310 787 47.1 Plus
Dper\GL22808-PA 318 GL22808-PA 6..313 5..310 644 42.9 Plus
Dper\GL24949-PA 440 GL24949-PA 1..136 1..136 587 80.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 17:29:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA23568-PA 312 GA23568-PA 1..310 1..310 1260 74.2 Plus
Dpse\GA23569-PA 317 GA23569-PA 32..313 32..310 831 54.3 Plus
Dpse\GA10606-PA 317 GA10606-PA 7..313 5..310 799 47.9 Plus
Dpse\GA23131-PA 379 GA23131-PA 36..343 3..310 796 47.4 Plus
Dpse\GA21786-PA 311 GA21786-PA 4..307 3..310 787 47.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 17:29:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24650-PA 544 GM24650-PA 1..251 1..251 1318 98.4 Plus
Dsec\GM14027-PA 316 GM14027-PA 6..312 5..310 797 48.2 Plus
Dsec\GM24650-PA 544 GM24650-PA 250..540 23..310 776 49.8 Plus
Dsec\GM14028-PA 320 GM14028-PA 10..313 8..310 743 46.1 Plus
Dsec\GM10439-PA 329 GM10439-PA 9..309 9..299 615 40.9 Plus
Dsec\GM24728-PA 320 GM24728-PA 3..314 4..310 582 38.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 17:29:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12714-PA 544 GD12714-PA 1..251 1..251 1324 98.8 Plus
Dsim\GD10303-PA 311 GD10303-PA 4..307 3..310 792 46.8 Plus
Dsim\GD13308-PA 316 GD13308-PA 6..312 5..310 791 47.9 Plus
Dsim\GD12714-PA 544 GD12714-PA 250..540 23..310 778 50.2 Plus
Dsim\GD13309-PA 320 GD13309-PA 10..313 8..310 747 46.1 Plus
Dsim\GD19441-PA 329 GD19441-PA 9..309 9..299 615 41.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 17:29:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13816-PA 317 GJ13816-PA 1..313 1..310 925 55 Plus
Dvir\GJ16106-PA 318 GJ16106-PA 7..314 4..310 801 49 Plus
Dvir\GJ20182-PA 311 GJ20182-PA 3..307 2..310 791 47.6 Plus
Dvir\GJ13817-PA 385 GJ13817-PA 37..342 3..308 760 44.8 Plus
Dvir\GJ14466-PA 329 GJ14466-PA 1..319 1..309 602 39.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 17:29:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK12622-PA 310 GK12622-PA 1..310 1..310 1182 70 Plus
Dwil\GK16694-PA 314 GK16694-PA 3..310 4..310 830 50.6 Plus
Dwil\GK12624-PA 300 GK12624-PA 9..296 26..310 816 51.7 Plus
Dwil\GK22153-PA 311 GK22153-PA 4..307 3..310 789 46.4 Plus
Dwil\GK12210-PA 317 GK12210-PA 6..313 5..310 765 47.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 17:29:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20116-PA 544 GE20116-PA 1..251 1..251 1244 91.6 Plus
Dyak\GE24510-PA 311 GE24510-PA 4..307 3..310 804 47.4 Plus
Dyak\GE20663-PA 316 GE20663-PA 6..312 5..310 787 47.6 Plus
Dyak\GE20116-PA 544 GE20116-PA 250..540 23..310 778 49.5 Plus
Dyak\GE14627-PA 386 GE14627-PA 37..344 3..310 768 46.4 Plus
Dyak\GE20664-PA 320 GE20664-PA 10..313 8..310 742 45.4 Plus