BDGP Sequence Production Resources |
Search the DGRC for IP08853
Library: | IP |
Tissue Source: | Pooled D melanogaster cDNA libraries |
Created by: | |
Date Registered: | 2004-07-08 |
Comments: | |
Original Plate Number: | 88 |
Well: | 53 |
Vector: | pOT2 |
Associated Gene/Transcript | lbl-RB |
Protein status: | IP08853.pep: gold |
Preliminary Size: | 1847 |
Sequenced Size: | 1752 |
Gene | Date | Evidence |
---|---|---|
CG6570 | 2005-01-01 | Successful iPCR screen |
lbl | 2008-04-29 | Release 5.5 accounting |
lbl | 2008-04-29 | Picked prior to 5.5 |
lbl | 2008-08-15 | Release 5.9 accounting |
lbl | 2008-12-18 | 5.12 accounting |
1752 bp (1752 high quality bases) assembled on 2005-08-25
GenBank Submission: BT022129
> IP08853.complete TTGCACGTTGTGCCGACGTTTTTCGTGTGACAGCCGCGCGTTTTGCCGAC GCGTTTTTAATCGCCCGTAGAAAAGAGTTTGGAGCTAAGCCGTAAGGATA CAGCCAGGATGTGCTGAGTGGCCAAAGGAAAATACACCTAGAGATGCCGC AAAGAACTCCCAGTCCCGCTAACTCTGATGTTTCGGTGGGTTCGCCCAGT CCACCGCCTCTGAGATCGTTGAATATGAAACGATTGCGGCTTTTGAGGAG TCCTATTAGCCTGGAACATGACCGCCAAAAGTCATCACCCGTCAGGGTCA AGAGCTTTTCCATTGCCGATATCCTGGGGCGAGGGCATGAAGAGGATCGT GTGGAGAAGAAGCCGGAGAGAATTGCCATTCCCAATGCTTTACCAGGAGT ACCTGCTCCATTGGCTCTGATCAACGAAAGATTGCAAATACCCTTGGTGC CGAATTGCCCTCCGCCGGCTGCACTACATACATTTTTATCGCCCGCTTTG CTCCACAGCTATGAGCAGCGACTGGCCTGGGACTACCAGCGCCAGCTCCA GGAGCACTTCCAGGCACAGGCGCAACTCCTCCGGCAGATGACCCTGAATC CCGCGATCATTGCCTCCGAGGACGGCAGTTCAGAGCGTTCCCAGCGATCA AGCAGCAGCAATGGCAGCACCGAATGCTGCAGTCCCACCCAGGCGGAAAA AGTGGAAAAACGTTCCCAAGAGGACAGAATGGAGGTTCCTAAGAAGTCGC CCGAGGAACAACCAAAGGGGGCCAGCAAATCAAGTGGAGACACTCCCTTG GATGCCCTCTTCCAGCTGTCCACCAAAAACTTTGACGAAGAGCAGGTCAG TACATCAAAGAGGCATTCAGCCCTTCGCTGGAACATATTCGAGACTTCGC CCAAATCCAAAGGGACGAAGGGCATAACGAATGCGGGAATGAATGGAAAA CTCAGTGATTTGGAAAAACAAGCACAAGTTGGTGTTATTGTGGATGTGGA TGTTGCTATTTACACGCAACACGACTGAGAACCAAACAACAACCACCAAC AATCACCGCAATAAAACAGGCCGAGAACGACAAACTTCACGGTAAAATCG AAGGAAGCTGTGGAAAATGTTTTCTTCCCCCGAATTGCTTCCTCAGATCG GTATATATATAGTTCTATATCTATATGGGCTGCTACTGTGGGCAATGTCA ACAAAGCATTTAACACCTTCATCGGCACAACAGCAGCCCCATGTGCTGGT GGGTATTTGTGTAATCGTTTATTAAAGTGTGAAGTAAATTAATTTGACTA TGCGAGATGTTTGCCGCTGTTTCCATGGCAAATGACTTGCAATCGCTGAC AAGATTAATTAATCCCCTTGCACAGCTGCGGGGAAATCGAAATGAAAACA AAATGTTTGCCTTAATTGATTTTCTTATCCATGGCTTTTCTTTTCGATTT CGCTTGTATTTCGTTTTGCAGTGCGGAATATTATGACACGTCTCGTTATG CCAACGAAAGGCGTTGTGTTTCATGTTTTGGCCATATGCAGAAGAGTTAA GTGCAGAGGAAAAATAGTGTGTAAACTCTAGTATCTATTAAGTGCAAAAT GTATATACATTTGTATTGCAGCCACTAATTCCAGTTAATGGAATTTAAAA TTACTTTGTAACCAGATATTCAATACATAAGTTCATAAATAAAATAAAAA CACATACACATGCATATAATATGCATATATATTTTAAAAAAAAAAAAAAA AA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 17250064..17250953 | 1735..846 | 4285 | 98.8 | Minus |
chr3R | 27901430 | chr3R | 17257115..17257960 | 846..1 | 4215 | 99.9 | Minus |
chr3R | 27901430 | chr3R | 17268938..17269270 | 838..509 | 565 | 78.7 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 21426214..21427104 | 1736..846 | 4455 | 100 | Minus |
3R | 32079331 | 3R | 21433265..21434110 | 846..1 | 4230 | 100 | Minus |
3R | 32079331 | 3R | 21445093..21445425 | 838..509 | 550 | 78.4 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 21167045..21167935 | 1736..846 | 4455 | 100 | Minus |
3R | 31820162 | 3R | 21174096..21174941 | 846..1 | 4230 | 100 | Minus |
3R | 31820162 | 3R | 21186054..21186256 | 711..509 | 520 | 83.7 | Minus |
3R | 31820162 | 3R | 21185924..21185976 | 838..786 | 145 | 84.9 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
transib4 | 2656 | transib4 TRANSIB4 2656bp | 315..371 | 1063..1007 | 123 | 68.4 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 17250075..17250952 | 847..1724 | 98 | <- | Minus |
chr3R | 17257115..17257960 | 1..846 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
lbl-RB | 1..885 | 144..1028 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
lbl-RB | 1..885 | 144..1028 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
lbl-RB | 1..885 | 144..1028 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
lbl-RA | 1..703 | 144..846 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
lbl-RB | 1..885 | 144..1028 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
lbl-RB | 1..1735 | 1..1735 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
lbl-RB | 1..1735 | 1..1735 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
lbl-RB | 24..1758 | 1..1735 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
lbl-RA | 14..859 | 1..846 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
lbl-RB | 24..1758 | 1..1735 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 21433265..21434110 | 1..846 | 100 | Minus | |
3R | 21426215..21427103 | 847..1735 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 21433265..21434110 | 1..846 | 100 | Minus | |
3R | 21426215..21427103 | 847..1735 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 21433265..21434110 | 1..846 | 100 | Minus | |
3R | 21426215..21427103 | 847..1735 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 17251937..17252825 | 847..1735 | 100 | <- | Minus |
arm_3R | 17258987..17259832 | 1..846 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 21167046..21167934 | 847..1735 | 100 | <- | Minus |
3R | 21174096..21174941 | 1..846 | 100 | Minus |
Translation from 143 to 1027
> IP08853.pep MPQRTPSPANSDVSVGSPSPPPLRSLNMKRLRLLRSPISLEHDRQKSSPV RVKSFSIADILGRGHEEDRVEKKPERIAIPNALPGVPAPLALINERLQIP LVPNCPPPAALHTFLSPALLHSYEQRLAWDYQRQLQEHFQAQAQLLRQMT LNPAIIASEDGSSERSQRSSSSNGSTECCSPTQAEKVEKRSQEDRMEVPK KSPEEQPKGASKSSGDTPLDALFQLSTKNFDEEQVSTSKRHSALRWNIFE TSPKSKGTKGITNAGMNGKLSDLEKQAQVGVIVDVDVAIYTQHD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16416-PA | 365 | GF16416-PA | 1..273 | 1..276 | 695 | 59.6 | Plus |
Dana\GF16415-PA | 472 | GF16415-PA | 124..363 | 46..276 | 226 | 36.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14506-PA | 370 | GG14506-PA | 1..269 | 1..276 | 1065 | 81.2 | Plus |
Dere\GG14495-PA | 479 | GG14495-PA | 125..371 | 46..276 | 400 | 49 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18729-PA | 411 | GH18729-PA | 1..290 | 1..276 | 435 | 49.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
lbl-PB | 294 | CG6570-PB | 1..294 | 1..294 | 1507 | 100 | Plus |
lbl-PA | 372 | CG6570-PA | 1..269 | 1..276 | 1216 | 88.4 | Plus |
lbl-PC | 410 | CG6570-PC | 1..269 | 1..276 | 1216 | 88.4 | Plus |
lbe-PA | 479 | CG6545-PA | 98..371 | 7..276 | 497 | 45.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10819-PA | 411 | GI10819-PA | 1..298 | 1..276 | 425 | 43.3 | Plus |
Dmoj\GI10818-PA | 511 | GI10818-PA | 131..260 | 46..152 | 162 | 39.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24421-PA | 442 | GL24421-PA | 1..289 | 1..276 | 554 | 52.7 | Plus |
Dper\GL24419-PA | 468 | GL24419-PA | 135..357 | 52..276 | 212 | 35.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19692-PB | 402 | GA19692-PB | 1..289 | 1..276 | 551 | 52.7 | Plus |
Dpse\GA19675-PA | 468 | GA19675-PA | 135..357 | 52..276 | 207 | 35.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11007-PA | 412 | GM11007-PA | 1..269 | 1..276 | 1120 | 85.9 | Plus |
Dsec\GM11006-PA | 479 | GM11006-PA | 125..371 | 46..276 | 411 | 50.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19977-PA | 412 | GD19977-PA | 1..269 | 1..276 | 1123 | 85.9 | Plus |
Dsim\GD19976-PA | 479 | GD19976-PA | 125..371 | 46..276 | 411 | 50.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14418-PA | 355 | GJ14418-PA | 1..261 | 1..276 | 472 | 49.7 | Plus |
Dvir\GJ14417-PA | 516 | GJ14417-PA | 132..403 | 46..276 | 203 | 31.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11029-PA | 424 | GK11029-PA | 16..281 | 7..276 | 543 | 52.4 | Plus |
Dwil\GK11027-PA | 463 | GK11027-PA | 120..353 | 46..276 | 201 | 36 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE11064-PA | 236 | GE11064-PA | 1..234 | 1..234 | 1029 | 90.2 | Plus |
Dyak\GE24976-PA | 405 | GE24976-PA | 1..269 | 1..276 | 985 | 80.4 | Plus |
Dyak\GE24975-PA | 473 | GE24975-PA | 119..365 | 46..276 | 403 | 49.6 | Plus |
Translation from 143 to 1027
> IP08853.hyp MPQRTPSPANSDVSVGSPSPPPLRSLNMKRLRLLRSPISLEHDRQKSSPV RVKSFSIADILGRGHEEDRVEKKPERIAIPNALPGVPAPLALINERLQIP LVPNCPPPAALHTFLSPALLHSYEQRLAWDYQRQLQEHFQAQAQLLRQMT LNPAIIASEDGSSERSQRSSSSNGSTECCSPTQAEKVEKRSQEDRMEVPK KSPEEQPKGASKSSGDTPLDALFQLSTKNFDEEQVSTSKRHSALRWNIFE TSPKSKGTKGITNAGMNGKLSDLEKQAQVGVIVDVDVAIYTQHD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
lbl-PB | 294 | CG6570-PB | 1..294 | 1..294 | 1507 | 100 | Plus |
lbl-PA | 372 | CG6570-PA | 1..269 | 1..276 | 1216 | 88.4 | Plus |
lbl-PC | 410 | CG6570-PC | 1..269 | 1..276 | 1216 | 88.4 | Plus |
lbe-PA | 479 | CG6545-PA | 98..371 | 7..276 | 497 | 45.9 | Plus |