BDGP Sequence Production Resources |
Search the DGRC for IP08862
Library: | IP |
Tissue Source: | Pooled D melanogaster cDNA libraries |
Created by: | |
Date Registered: | 2004-07-08 |
Comments: | |
Original Plate Number: | 88 |
Well: | 62 |
Vector: | pOT2 |
Associated Gene/Transcript | E(spl)mgamma-HLH-RA |
Protein status: | IP08862.pep: gold |
Preliminary Size: | 842 |
Sequenced Size: | 958 |
Gene | Date | Evidence |
---|---|---|
CG8333 | 2005-01-01 | Successful iPCR screen |
HLHmgamma | 2008-04-29 | Release 5.5 accounting |
HLHmgamma | 2008-08-15 | Release 5.9 accounting |
HLHmgamma | 2008-12-18 | 5.12 accounting |
958 bp (958 high quality bases) assembled on 2005-08-25
GenBank Submission: BT022125
> IP08862.complete AAGAGCTCAAAGAACTCAGCTTACATCGAAACTACAAAAAGAACAATAAG AAACACACAAAATGTCGTCGCTACAAATGTCCGAGATGTCCAAGACCTAT CAGTACCGCAAGGTGATGAAGCCCATGCTGGAGAGGAAGCGTCGTGCCAG AATCAACAAGTGCCTGGACGAGCTAAAGGATCTTATGGTTGCCACCTTGG AGTCCGAGGGCGAGCACGTCACCCGTTTGGAGAAAGCCGATATCCTGGAA CTTACCGTCACCCATTTGCAAAAGATGAAGCAGCAGCGTCAGCACAAGCG GGCTTCCGGCGATGAGAGCTTGACTCCGGCGGAGGGCTTCCGTTCCGGCT ACATCCATGCCGTCAATGAGGTCTCCCGTTCACTCTCCCAGCTGCCCGGC ATGAATGTCAGCCTAGGCACTCAGCTAATGACCCACCTGGGACAGCGCCT CAATCAGATCCAGCCAGCAGAAAAGGAAGTCTTGCCGGTGACCGCTCCAC TCTCCGTGCACATCGCCAATCGGGATGCCTACTCCGTGCCCATTTCGCCA ATCTCCAGCTACGCCGGCAGTCCCAACTCCAATACCAGTTCGACCAGCCA TTCCCTGTTGACCACCATCGATGTGACCAAGATGGAGGACGACAGCGAGG ACGAGGAGAACGTCTGGCGTCCCTGGTAGATAGGATTACTTCACACCACA ACTGAAAAAAAAAAAAACGAAGGAGAGATCATAGAAAGTAAAAGTCTTCC GAGTCACTGGATTTCCACCAGTCGACTCCCACCTAGTTATAAGTAAACAC CATAAACACACAAAGCTTTAGATGAGGACGCGCAGTTCATGTGATAACTA AATAAATAATAAATTATATAGCTAAAATTGAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
HLHmgamma-RA | 904 | HLHmgamma-RA | 25..904 | 1..880 | 4400 | 100 | Plus |
HLHmbeta-RA | 1098 | HLHmbeta-RA | 146..243 | 83..180 | 400 | 93.8 | Plus |
HLHm3-RA | 1422 | HLHm3-RA | 315..421 | 83..189 | 340 | 87.8 | Plus |
HLHmbeta-RA | 1098 | HLHmbeta-RA | 269..321 | 206..258 | 160 | 86.7 | Plus |
HLHm3-RA | 1422 | HLHm3-RA | 438..481 | 206..249 | 160 | 90.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 21822871..21823750 | 1..880 | 4340 | 99.5 | Plus |
chr3R | 27901430 | chr3R | 21828689..21828864 | 258..83 | 460 | 84.1 | Minus |
chr3R | 27901430 | chr3R | 21860161..21860267 | 82..188 | 430 | 93.5 | Plus |
chr3R | 27901430 | chr3R | 21845016..21845182 | 83..249 | 415 | 83.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 25999882..26000764 | 1..883 | 4415 | 100 | Plus |
3R | 32079331 | 3R | 26005703..26005878 | 258..83 | 460 | 84.1 | Minus |
3R | 32079331 | 3R | 26022029..26022195 | 83..249 | 430 | 83.8 | Plus |
3R | 32079331 | 3R | 26037177..26037283 | 82..188 | 430 | 93.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 25740713..25741595 | 1..883 | 4415 | 100 | Plus |
3R | 31820162 | 3R | 25778008..25778114 | 82..188 | 430 | 93.4 | Plus |
3R | 31820162 | 3R | 25746612..25746709 | 180..83 | 400 | 93.8 | Minus |
3R | 31820162 | 3R | 25762860..25762966 | 83..189 | 340 | 87.8 | Plus |
3R | 31820162 | 3R | 25746534..25746586 | 258..206 | 160 | 86.7 | Minus |
3R | 31820162 | 3R | 25762983..25763026 | 206..249 | 160 | 90.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
17.6 | 7439 | 17.6 DMIS176 7439bp AKA(J01060,J01061) Derived from X01472 (g8142) (Rel. 36, Last updated, Version 2). | 834..869 | 844..879 | 108 | 77.8 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 21822871..21823712 | 1..842 | 99 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
HLHmgamma-RA | 1..618 | 62..679 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
HLHmgamma-RA | 1..618 | 62..679 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
E(spl)mgamma-HLH-RA | 1..618 | 62..679 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
HLHmgamma-RA | 1..618 | 62..679 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
E(spl)mgamma-HLH-RA | 1..618 | 62..679 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
HLHmgamma-RA | 25..842 | 1..818 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
HLHmgamma-RA | 25..842 | 1..818 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
E(spl)mgamma-HLH-RA | 32..911 | 1..880 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
HLHmgamma-RA | 25..842 | 1..818 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
E(spl)mgamma-HLH-RA | 32..911 | 1..880 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 25999882..26000761 | 1..880 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 25999882..26000761 | 1..880 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 25999882..26000761 | 1..880 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 21825604..21826483 | 1..880 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 25740713..25741592 | 1..880 | 100 | Plus |
Translation from 61 to 678
> IP08862.hyp MSSLQMSEMSKTYQYRKVMKPMLERKRRARINKCLDELKDLMVATLESEG EHVTRLEKADILELTVTHLQKMKQQRQHKRASGDESLTPAEGFRSGYIHA VNEVSRSLSQLPGMNVSLGTQLMTHLGQRLNQIQPAEKEVLPVTAPLSVH IANRDAYSVPISPISSYAGSPNSNTSSTSHSLLTTIDVTKMEDDSEDEEN VWRPW*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
E(spl)mgamma-HLH-PA | 205 | CG8333-PA | 1..205 | 1..205 | 1041 | 100 | Plus |
E(spl)mbeta-HLH-PA | 195 | CG14548-PA | 6..195 | 8..205 | 475 | 50.5 | Plus |
E(spl)m7-HLH-PA | 186 | CG8361-PA | 6..186 | 8..205 | 428 | 48.7 | Plus |
E(spl)m3-HLH-PA | 224 | CG8346-PA | 4..224 | 8..205 | 353 | 42 | Plus |
E(spl)mdelta-HLH-PA | 173 | CG8328-PA | 9..173 | 9..205 | 324 | 39.6 | Plus |
Translation from 61 to 678
> IP08862.pep MSSLQMSEMSKTYQYRKVMKPMLERKRRARINKCLDELKDLMVATLESEG EHVTRLEKADILELTVTHLQKMKQQRQHKRASGDESLTPAEGFRSGYIHA VNEVSRSLSQLPGMNVSLGTQLMTHLGQRLNQIQPAEKEVLPVTAPLSVH IANRDAYSVPISPISSYAGSPNSNTSSTSHSLLTTIDVTKMEDDSEDEEN VWRPW*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16796-PA | 205 | GF16796-PA | 11..205 | 11..205 | 944 | 95.4 | Plus |
Dana\GF18225-PA | 200 | GF18225-PA | 6..196 | 8..205 | 498 | 51.9 | Plus |
Dana\GF16801-PA | 180 | GF16801-PA | 6..136 | 8..147 | 401 | 57.1 | Plus |
Dana\GF16799-PA | 224 | GF16799-PA | 4..135 | 8..130 | 362 | 57.9 | Plus |
Dana\GF16795-PA | 182 | GF16795-PA | 9..182 | 9..205 | 341 | 40.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11450-PA | 205 | GG11450-PA | 1..205 | 1..205 | 1090 | 100 | Plus |
Dere\GG12207-PA | 195 | GG12207-PA | 6..195 | 8..205 | 499 | 51 | Plus |
Dere\GG11458-PA | 186 | GG11458-PA | 6..139 | 8..149 | 409 | 57 | Plus |
Dere\GG11454-PA | 226 | GG11454-PA | 4..226 | 8..205 | 355 | 41.5 | Plus |
Dere\GG11449-PA | 173 | GG11449-PA | 9..173 | 9..205 | 330 | 39.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19452-PA | 217 | GH19452-PA | 11..217 | 11..205 | 865 | 85.5 | Plus |
Dgri\GH18148-PA | 210 | GH18148-PA | 6..210 | 8..205 | 489 | 47.9 | Plus |
Dgri\GH19458-PA | 207 | GH19458-PA | 6..207 | 8..205 | 427 | 45.1 | Plus |
Dgri\GH19456-PA | 228 | GH19456-PA | 4..136 | 8..130 | 359 | 55.2 | Plus |
Dgri\GH19451-PA | 198 | GH19451-PA | 9..171 | 9..143 | 291 | 41.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
E(spl)mgamma-HLH-PA | 205 | CG8333-PA | 1..205 | 1..205 | 1041 | 100 | Plus |
E(spl)mbeta-HLH-PA | 195 | CG14548-PA | 6..195 | 8..205 | 475 | 50.5 | Plus |
E(spl)m7-HLH-PA | 186 | CG8361-PA | 6..186 | 8..205 | 428 | 48.7 | Plus |
E(spl)m3-HLH-PA | 224 | CG8346-PA | 4..224 | 8..205 | 353 | 42 | Plus |
E(spl)mdelta-HLH-PA | 173 | CG8328-PA | 9..173 | 9..205 | 324 | 39.6 | Plus |
E(spl)m8-HLH-PA | 179 | CG8365-PA | 1..179 | 6..205 | 288 | 35 | Plus |
E(spl)m5-HLH-PA | 178 | CG6096-PA | 12..178 | 9..205 | 266 | 34.5 | Plus |
dpn-PA | 435 | CG8704-PA | 39..157 | 14..134 | 244 | 38.8 | Plus |
h-PB | 337 | CG6494-PB | 32..144 | 16..134 | 208 | 37.8 | Plus |
h-PA | 337 | CG6494-PA | 32..144 | 16..134 | 208 | 37.8 | Plus |
Hesr-PA | 149 | CG5927-PA | 16..116 | 10..108 | 185 | 39.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24686-PA | 217 | GI24686-PA | 1..217 | 1..205 | 949 | 86.2 | Plus |
Dmoj\GI22910-PA | 210 | GI22910-PA | 6..210 | 8..205 | 471 | 47.9 | Plus |
Dmoj\GI24692-PA | 207 | GI24692-PA | 6..207 | 8..205 | 428 | 46.3 | Plus |
Dmoj\GI24690-PA | 229 | GI24690-PA | 4..138 | 8..130 | 354 | 54.4 | Plus |
Dmoj\GI24685-PA | 185 | GI24685-PA | 9..185 | 9..205 | 315 | 37.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21815-PA | 214 | GL21815-PA | 1..214 | 1..205 | 959 | 86.9 | Plus |
Dper\GL22021-PA | 200 | GL22021-PA | 6..200 | 8..205 | 491 | 51.4 | Plus |
Dper\GL21822-PA | 207 | GL21822-PA | 6..148 | 8..149 | 383 | 54.5 | Plus |
Dper\GL21819-PA | 225 | GL21819-PA | 4..225 | 8..205 | 365 | 41.5 | Plus |
Dper\GL21813-PA | 188 | GL21813-PA | 9..188 | 9..205 | 312 | 38.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20996-PA | 214 | GA20996-PA | 1..214 | 1..205 | 955 | 86.4 | Plus |
Dpse\GA13073-PA | 200 | GA13073-PA | 6..200 | 8..205 | 491 | 51.4 | Plus |
Dpse\GA21018-PA | 206 | GA21018-PA | 6..146 | 8..147 | 377 | 54.5 | Plus |
Dpse\GA21008-PA | 219 | GA21008-PA | 4..219 | 8..205 | 374 | 42.6 | Plus |
Dpse\GA20991-PA | 188 | GA20991-PA | 9..188 | 9..205 | 312 | 38.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10294-PA | 205 | GM10294-PA | 1..205 | 1..205 | 1086 | 99.5 | Plus |
Dsec\GM10206-PA | 195 | GM10206-PA | 6..195 | 8..205 | 502 | 51 | Plus |
Dsec\GM10299-PA | 186 | GM10299-PA | 6..139 | 8..149 | 405 | 56.3 | Plus |
Dsec\GM10297-PA | 221 | GM10297-PA | 4..221 | 8..205 | 362 | 41.5 | Plus |
Dsec\GM10293-PA | 173 | GM10293-PA | 9..173 | 9..205 | 328 | 39.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\HLHmgamma-PA | 205 | GD21258-PA | 1..205 | 1..205 | 1086 | 99.5 | Plus |
Dsim\HLHmbeta-PA | 195 | GD18157-PA | 6..195 | 8..205 | 499 | 51 | Plus |
Dsim\HLHm7-PA | 186 | GD21263-PA | 6..139 | 8..149 | 409 | 57 | Plus |
Dsim\HLHm3-PA | 224 | GD21261-PA | 4..224 | 8..205 | 361 | 40.6 | Plus |
Dsim\HLHmdelta-PA | 173 | GD21257-PA | 9..173 | 9..205 | 328 | 39.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23903-PA | 217 | GJ23903-PA | 1..217 | 1..205 | 958 | 87.1 | Plus |
Dvir\GJ23323-PA | 209 | GJ23323-PA | 6..209 | 8..205 | 492 | 52.7 | Plus |
Dvir\GJ23909-PA | 197 | GJ23909-PA | 6..197 | 8..205 | 415 | 49.3 | Plus |
Dvir\GJ23906-PA | 220 | GJ23906-PA | 4..220 | 8..205 | 369 | 42.7 | Plus |
Dvir\GJ23902-PA | 188 | GJ23902-PA | 9..188 | 9..205 | 326 | 38.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14455-PA | 209 | GK14455-PA | 1..209 | 1..205 | 943 | 86.7 | Plus |
Dwil\GK14459-PA | 200 | GK14459-PA | 6..200 | 8..205 | 481 | 53.2 | Plus |
Dwil\GK12809-PA | 201 | GK12809-PA | 6..201 | 8..205 | 468 | 49.1 | Plus |
Dwil\GK14458-PA | 223 | GK14458-PA | 4..223 | 8..205 | 365 | 42.1 | Plus |
Dwil\GK14454-PA | 184 | GK14454-PA | 9..184 | 9..205 | 321 | 39.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\HLHmgamma-PA | 205 | GE23644-PA | 1..205 | 1..205 | 1082 | 99 | Plus |
Dyak\HLHmbeta-PA | 195 | GE10652-PA | 6..195 | 8..205 | 503 | 50.5 | Plus |
Dyak\HLHm7-PA | 186 | GE23649-PA | 6..139 | 8..149 | 409 | 57 | Plus |
Dyak\GE23647-PA | 224 | GE23647-PA | 4..224 | 8..205 | 362 | 41.5 | Plus |
Dyak\HLHmdelta-PA | 173 | GE23643-PA | 9..173 | 9..205 | 326 | 39.1 | Plus |