Clone IP09063 Report

Search the DGRC for IP09063

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:90
Well:63
Vector:pOT2
Associated Gene/TranscriptE(spl)m7-HLH-RA
Protein status:IP09063.pep: gold
Preliminary Size:723
Sequenced Size:1061

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG8361 2005-01-01 Successful iPCR screen
HLHm7 2008-04-29 Release 5.5 accounting

Clone Sequence Records

IP09063.complete Sequence

1061 bp (1061 high quality bases) assembled on 2005-05-23

GenBank Submission: BT022121

> IP09063.complete
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
GAGAGAGAGAGAGAGAGAGAGAGCTCAGGATAACCTCCTCCGAAAGATCG
AAGAAGTTCTTCAACAAGTCGTTCTTCCATTTACCTAAACGCAACAAATA
AACAAAACAAACACACAATGGCCACCAAATACGAGATGTCGAAAACCTAT
CAGTACCGCAAGGTGATGAAGCCCTTGCTGGAGCGGAAGCGTCGTGCCAG
GATCAACAAGTGCCTGGACGAGCTCAAGGATCTGATGGCCGAGTGCGTTG
CTCAGACTGGCGATGCCAAATTCGAGAAGGCCGACATCCTGGAAGTCACC
GTGCAGCATCTCCGCAAGCTGAAAGAGTCTAAGAAGCATGTTCCGGCCAA
TCCCGAACAGAGTTTCCGTGCTGGATACATCCGGGCAGCCAACGAAGTGT
CCCGCGCCCTGGCCTCCCTTCCCCGAGTGGATGTGGCTTTTGGAACCACA
CTGATGACCCATCTGGGCATGCGTCTCAACCAACTGGAGCAGCCCATGGA
ACAACCGCAAGCCGTCAACACTCCACTCAGTATCGTCTGTGGATCCAGCT
CTAGCTCCAGCACCTACTCCAGTGCCAGCTCCTGCTCCTCCATCAGTCCC
GTTTCCAGTGGATATGCCAGCGACAACGAGTCTCTGCTCCAGATCAGCAG
CCCCGGACAGGTGTGGCGTCCCTGGTAAACAAAGATCTACTTGGAAGGAC
TGAATTCCCGACGGGCAATCACGCAATTGGAACCGCAGCTTTAGAAAAAA
TGCTTTACAATGATCCTCATTTATTTGTTACGTTACCAAGTTTTAGGTTT
CTAAGTTAAGTCTGTGATAGGGCACGCTTTATTAACTTTTGTCTTAAATC
AATCGAGCAGAAGTCTGTTTTTTACTCTACATATATACAAATGTTTACCA
GCTAAGAGATCTCAAGAACACAATATGAAAAGATACAAAATGAAAAACTT
AAATACAAATCAAAATATGAAATGAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAA

IP09063.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:36:28
Subject Length Description Subject Range Query Range Score Percent Strand
HLHm7-RA 982 HLHm7-RA 32..982 74..1024 4755 100 Plus
HLHmgamma-RA 904 HLHmgamma-RA 106..212 182..288 430 93.4 Plus
HLHmbeta-RA 1098 HLHmbeta-RA 146..259 183..296 405 90.3 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 15:50:10
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 21860053..21861003 74..1024 4755 100 Plus
chr3R 27901430 chr3R 21822952..21823058 182..288 430 93.5 Plus
chr3R 27901430 chr3R 21828751..21828864 296..183 405 90.4 Minus
chr3R 27901430 chr3R 21845016..21845129 183..296 375 88.6 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:57:26 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 15:50:08
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 26037069..26038022 74..1027 4770 100 Plus
3R 32079331 3R 25999963..26000069 182..288 430 93.5 Plus
3R 32079331 3R 26005765..26005878 296..183 405 90.4 Minus
3R 32079331 3R 26022029..26022142 183..296 375 88.6 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:26:46
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 25777900..25778853 74..1027 4770 100 Plus
3R 31820162 3R 25740794..25740900 182..288 430 93.4 Plus
3R 31820162 3R 25746596..25746709 296..183 405 90.3 Minus
3R 31820162 3R 25762860..25762973 183..296 375 88.5 Plus
Blast to na_te.dros performed on 2019-03-15 15:50:08 has no hits.

IP09063.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 15:50:49 Download gff for IP09063.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 21860053..21861003 74..1024 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:38:27 Download gff for IP09063.complete
Subject Subject Range Query Range Percent Splice Strand
HLHm7-RA 1..561 168..728 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:01:28 Download gff for IP09063.complete
Subject Subject Range Query Range Percent Splice Strand
HLHm7-RA 1..561 168..728 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 01:43:05 Download gff for IP09063.complete
Subject Subject Range Query Range Percent Splice Strand
E(spl)m7-HLH-RA 1..561 168..728 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:41:59 Download gff for IP09063.complete
Subject Subject Range Query Range Percent Splice Strand
HLHm7-RA 1..561 168..728 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:18:14 Download gff for IP09063.complete
Subject Subject Range Query Range Percent Splice Strand
E(spl)m7-HLH-RA 1..561 168..728 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:45:09 Download gff for IP09063.complete
Subject Subject Range Query Range Percent Splice Strand
HLHm7-RA 32..723 74..765 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:01:28 Download gff for IP09063.complete
Subject Subject Range Query Range Percent Splice Strand
HLHm7-RA 32..982 74..1024 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:43:05 Download gff for IP09063.complete
Subject Subject Range Query Range Percent Splice Strand
E(spl)m7-HLH-RA 32..982 74..1024 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:41:59 Download gff for IP09063.complete
Subject Subject Range Query Range Percent Splice Strand
HLHm7-RA 32..723 74..765 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:18:14 Download gff for IP09063.complete
Subject Subject Range Query Range Percent Splice Strand
E(spl)m7-HLH-RA 32..982 74..1024 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:50:49 Download gff for IP09063.complete
Subject Subject Range Query Range Percent Splice Strand
3R 26037069..26038019 74..1024 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:50:49 Download gff for IP09063.complete
Subject Subject Range Query Range Percent Splice Strand
3R 26037069..26038019 74..1024 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:50:49 Download gff for IP09063.complete
Subject Subject Range Query Range Percent Splice Strand
3R 26037069..26038019 74..1024 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:43:05 Download gff for IP09063.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 21862791..21863741 74..1024 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:21:00 Download gff for IP09063.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25777900..25778850 74..1024 100   Plus

IP09063.pep Sequence

Translation from 167 to 727

> IP09063.pep
MATKYEMSKTYQYRKVMKPLLERKRRARINKCLDELKDLMAECVAQTGDA
KFEKADILEVTVQHLRKLKESKKHVPANPEQSFRAGYIRAANEVSRALAS
LPRVDVAFGTTLMTHLGMRLNQLEQPMEQPQAVNTPLSIVCGSSSSSSTY
SSASSCSSISPVSSGYASDNESLLQISSPGQVWRPW*

IP09063.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 15:00:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF16801-PA 180 GF16801-PA 1..180 1..186 760 87.6 Plus
Dana\GF18225-PA 200 GF18225-PA 1..196 1..186 430 46 Plus
Dana\GF16796-PA 205 GF16796-PA 11..166 9..164 414 52.4 Plus
Dana\GF16802-PA 180 GF16802-PA 5..180 8..186 316 42.7 Plus
Dana\GF16795-PA 182 GF16795-PA 9..182 7..186 312 39.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 15:00:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG11458-PA 186 GG11458-PA 1..186 1..186 965 97.8 Plus
Dere\GG12207-PA 195 GG12207-PA 1..195 1..186 436 46.7 Plus
Dere\GG11450-PA 205 GG11450-PA 8..205 6..186 426 46.4 Plus
Dere\GG11454-PA 226 GG11454-PA 4..134 6..120 318 50.4 Plus
Dere\GG11459-PA 179 GG11459-PA 5..179 8..186 314 41.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 15:00:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19458-PA 207 GH19458-PA 1..207 1..186 706 72 Plus
Dgri\GH19452-PA 217 GH19452-PA 11..176 9..173 431 52.9 Plus
Dgri\GH18148-PA 210 GH18148-PA 1..210 1..186 410 45.3 Plus
Dgri\GH19456-PA 228 GH19456-PA 4..136 6..120 315 50 Plus
Dgri\GH19459-PA 193 GH19459-PA 5..193 8..186 303 39.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:07:03
Subject Length Description Subject Range Query Range Score Percent Strand
E(spl)m7-HLH-PA 186 CG8361-PA 1..186 1..186 945 100 Plus
E(spl)mgamma-HLH-PA 205 CG8333-PA 8..205 6..186 428 48.7 Plus
E(spl)mbeta-HLH-PA 195 CG14548-PA 1..195 1..186 412 46.3 Plus
E(spl)m3-HLH-PA 224 CG8346-PA 4..224 6..186 323 38.5 Plus
E(spl)m8-HLH-PA 179 CG8365-PA 5..179 8..186 306 40.7 Plus
E(spl)m5-HLH-PA 178 CG6096-PA 12..178 7..186 304 39.8 Plus
E(spl)mdelta-HLH-PA 173 CG8328-PA 9..157 7..147 280 43.6 Plus
dpn-PA 435 CG8704-PA 39..158 12..125 211 37.5 Plus
h-PB 337 CG6494-PB 32..198 14..170 189 33.9 Plus
h-PA 337 CG6494-PA 32..198 14..170 189 33.9 Plus
Hesr-PA 149 CG5927-PA 16..81 8..76 166 49.3 Plus
Hey-PA 425 CG11194-PA 101..259 14..180 159 30.2 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 15:00:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI24692-PA 207 GI24692-PA 1..207 1..186 680 72.5 Plus
Dmoj\GI24686-PA 217 GI24686-PA 8..176 6..173 448 53.7 Plus
Dmoj\GI22910-PA 210 GI22910-PA 1..210 1..186 409 45.8 Plus
Dmoj\GI24690-PA 229 GI24690-PA 4..138 6..120 318 50 Plus
Dmoj\GI24693-PA 173 GI24693-PA 5..173 8..186 315 41.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 15:00:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL21822-PA 207 GL21822-PA 1..207 1..186 610 63.5 Plus
Dper\GL21815-PA 214 GL21815-PA 8..214 6..186 456 47.4 Plus
Dper\GL22021-PA 200 GL22021-PA 1..200 1..186 429 46.6 Plus
Dper\GL21819-PA 225 GL21819-PA 4..133 6..120 316 50.7 Plus
Dper\GL21813-PA 188 GL21813-PA 9..188 7..186 299 38.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 15:00:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA21018-PA 206 GA21018-PA 1..206 1..186 585 64.3 Plus
Dpse\GA20996-PA 214 GA20996-PA 8..214 6..186 456 47.4 Plus
Dpse\GA13073-PA 200 GA13073-PA 1..200 1..186 429 46.6 Plus
Dpse\GA21008-PA 219 GA21008-PA 4..133 6..120 317 50.7 Plus
Dpse\GA20991-PA 188 GA20991-PA 9..188 7..186 299 38.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 15:00:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM10299-PA 186 GM10299-PA 1..186 1..186 978 98.4 Plus
Dsec\GM10206-PA 195 GM10206-PA 1..195 1..186 436 46.7 Plus
Dsec\GM10294-PA 205 GM10294-PA 8..205 6..186 423 46.4 Plus
Dsec\GM10297-PA 221 GM10297-PA 4..134 6..120 317 50.4 Plus
Dsec\GM10301-PA 179 GM10301-PA 5..179 8..186 314 41.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 15:00:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\HLHm7-PA 186 GD21263-PA 1..186 1..186 981 98.9 Plus
Dsim\HLHmbeta-PA 195 GD18157-PA 1..195 1..186 436 46.7 Plus
Dsim\HLHmgamma-PA 205 GD21258-PA 8..205 6..186 423 46.4 Plus
Dsim\HLHm3-PA 224 GD21261-PA 4..134 6..120 317 50.4 Plus
Dsim\E(spl)-PA 179 GD21264-PA 5..179 8..186 310 40.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 15:00:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ23909-PA 197 GJ23909-PA 1..197 1..186 713 72.8 Plus
Dvir\GJ23903-PA 217 GJ23903-PA 8..217 6..186 461 48.1 Plus
Dvir\GJ23323-PA 209 GJ23323-PA 1..209 1..186 412 46.9 Plus
Dvir\GJ23906-PA 220 GJ23906-PA 4..136 6..120 314 49.6 Plus
Dvir\GJ23910-PA 182 GJ23910-PA 5..182 8..186 305 43.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 15:00:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK14459-PA 200 GK14459-PA 1..200 1..186 726 73.1 Plus
Dwil\GK14455-PA 209 GK14455-PA 8..209 6..186 459 49 Plus
Dwil\GK12809-PA 201 GK12809-PA 1..201 1..186 412 46.9 Plus
Dwil\GK14458-PA 223 GK14458-PA 4..133 6..120 317 50.7 Plus
Dwil\GK14460-PA 191 GK14460-PA 5..191 8..186 284 40.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 15:00:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\HLHm7-PA 186 GE23649-PA 1..186 1..186 972 98.4 Plus
Dyak\HLHmbeta-PA 195 GE10652-PA 1..195 1..186 436 46.7 Plus
Dyak\HLHmgamma-PA 205 GE23644-PA 8..205 6..186 431 46.9 Plus
Dyak\GE23647-PA 224 GE23647-PA 4..134 6..120 317 50.4 Plus
Dyak\GE23650-PA 179 GE23650-PA 5..179 8..186 312 40.7 Plus

IP09063.hyp Sequence

Translation from 167 to 727

> IP09063.hyp
MATKYEMSKTYQYRKVMKPLLERKRRARINKCLDELKDLMAECVAQTGDA
KFEKADILEVTVQHLRKLKESKKHVPANPEQSFRAGYIRAANEVSRALAS
LPRVDVAFGTTLMTHLGMRLNQLEQPMEQPQAVNTPLSIVCGSSSSSSTY
SSASSCSSISPVSSGYASDNESLLQISSPGQVWRPW*

IP09063.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:00:16
Subject Length Description Subject Range Query Range Score Percent Strand
E(spl)m7-HLH-PA 186 CG8361-PA 1..186 1..186 945 100 Plus
E(spl)mgamma-HLH-PA 205 CG8333-PA 8..205 6..186 428 48.7 Plus
E(spl)mbeta-HLH-PA 195 CG14548-PA 1..195 1..186 412 46.3 Plus
E(spl)m3-HLH-PA 224 CG8346-PA 4..224 6..186 323 38.5 Plus
E(spl)m8-HLH-PA 179 CG8365-PA 5..179 8..186 306 40.7 Plus