Clone IP09210 Report

Search the DGRC for IP09210

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:92
Well:10
Vector:pOT2
Associated Gene/TranscriptCG10584-RA
Protein status:IP09210.pep: gold
Preliminary Size:825
Sequenced Size:1165

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG10584 2008-04-29 Release 5.5 accounting
CG10584 2008-08-15 Release 5.9 accounting
CG10584 2008-12-18 5.12 accounting

Clone Sequence Records

IP09210.complete Sequence

1165 bp (1165 high quality bases) assembled on 2006-09-22

GenBank Submission: BT029075

> IP09210.complete
ATTGGCGATACCGATTTTGTAATCGACCACGACGCCCGGGGAAGATGTCT
CGACCGACCGCAGCATTAAATTCATATACCCTATGCTCTTGGCCGCATAC
ATAACCGGATCATGTTCACGGTCACGTCGGAGATCTACGGAGAGAACAAC
TACCAGACGACCCGCGATGGAGGTAAGGTGTTGTCGAAGTTCCGTTTCGT
CTATCCGGAGGAGAAGCTGGCGGGGATTAGGACGGATAAAGACGGCGACC
TTGAGGTGCCAAGGCCGAAACGTGGCGTGATCGAATTGGAACATTCCGAG
GCCACGGAGCTCCGGCTGGTGGGCTTGCAGGTGTGGCGAGGAGCCCTTCT
TCTGGCAGACTACCTTTTCTCCAAAAAGGATGAGTTTTCCCAGAAAACCC
TAATGGAACTGGGAGCTGGTGTCGGCCTGACCAGCATTGCCGCCGGAATA
CACAATAACGGAAGGATCTATTGCACGGATGTGGACCTGGGATGCATACT
GAAGCTGATCCGCGGCAATGTCCAAAGAAATTCAAAACTCCTCCGCGCTA
CGATATCAGTTCTGGAGTTTGATTTTCTCGCCTCAAAAGAGGATCACTCG
CAGGATCTGCTGGAGGCCATAGACAATAGCGATATAATCCTAGCTGCCGA
TGTCATCTACTGTGATACGCTAACCGATGCCTTCATCTGCGTCTTGGATA
ACCTCCTGGATCGAGGTCGCCAAACTGGGAGACCCAAAACGATATACATG
GCACTGGAGAAGCGCTATGTGTTCACACTGGAGGATTGCGATTCGGTGGC
TCCCATGTATGAGTACCTCATCCGGCAGACGGTGAACAAGCCGTGGATCA
TGGAGCACCTGCCTCTGGATTTCCCCCAGTATTTCGAGTACGATCGCTGC
AAGCAACTGGTTCTGATGAAGATCATCAGTCGTTAAAATGCGTAAATCAC
ACATAAAGACGTTCCGCTTCTTAGATTCAAATGGCCCCTCGATGTACCTT
AATAATTTAGTTAAATTATGGCTTTGTTACGTTAGGTTGAGATATCACCG
GAATTAAACTAATAACATTGATTGTGACGATAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAA

IP09210.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:15:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG10584-RA 1081 CG10584-RA 1..1081 1..1081 5405 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 09:40:20
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 21019289..21020369 1081..1 5405 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:57:32 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 09:40:18
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 21030279..21031360 1082..1 5410 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:08:47
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 21023379..21024460 1082..1 5410 100 Minus
Blast to na_te.dros performed on 2019-03-16 09:40:18 has no hits.

IP09210.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 09:41:19 Download gff for IP09210.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 21019289..21020369 1..1081 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:38:39 Download gff for IP09210.complete
Subject Subject Range Query Range Percent Splice Strand
CG10584-RA 1..825 112..936 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:25:47 Download gff for IP09210.complete
Subject Subject Range Query Range Percent Splice Strand
CG10584-RA 1..825 112..936 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 10:44:19 Download gff for IP09210.complete
Subject Subject Range Query Range Percent Splice Strand
CG10584-RA 1..825 112..936 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 15:45:19 Download gff for IP09210.complete
Subject Subject Range Query Range Percent Splice Strand
CG10584-RA 1..825 112..936 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 09:43:38 Download gff for IP09210.complete
Subject Subject Range Query Range Percent Splice Strand
CG10584-RA 1..825 112..936 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:54:03 Download gff for IP09210.complete
Subject Subject Range Query Range Percent Splice Strand
CG10584-RA 1..825 112..936 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:25:47 Download gff for IP09210.complete
Subject Subject Range Query Range Percent Splice Strand
CG10584-RA 1..1081 1..1081 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:44:19 Download gff for IP09210.complete
Subject Subject Range Query Range Percent Splice Strand
CG10584-RA 1..1081 1..1081 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 15:45:20 Download gff for IP09210.complete
Subject Subject Range Query Range Percent Splice Strand
CG10584-RA 1..825 112..936 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:43:38 Download gff for IP09210.complete
Subject Subject Range Query Range Percent Splice Strand
CG10584-RA 1..1081 1..1081 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:41:19 Download gff for IP09210.complete
Subject Subject Range Query Range Percent Splice Strand
3L 21030280..21031360 1..1081 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:41:19 Download gff for IP09210.complete
Subject Subject Range Query Range Percent Splice Strand
3L 21030280..21031360 1..1081 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:41:19 Download gff for IP09210.complete
Subject Subject Range Query Range Percent Splice Strand
3L 21030280..21031360 1..1081 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:44:19 Download gff for IP09210.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 21023380..21024460 1..1081 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:52:50 Download gff for IP09210.complete
Subject Subject Range Query Range Percent Splice Strand
3L 21023380..21024460 1..1081 100   Minus

IP09210.pep Sequence

Translation from 111 to 935

> IP09210.pep
MFTVTSEIYGENNYQTTRDGGKVLSKFRFVYPEEKLAGIRTDKDGDLEVP
RPKRGVIELEHSEATELRLVGLQVWRGALLLADYLFSKKDEFSQKTLMEL
GAGVGLTSIAAGIHNNGRIYCTDVDLGCILKLIRGNVQRNSKLLRATISV
LEFDFLASKEDHSQDLLEAIDNSDIILAADVIYCDTLTDAFICVLDNLLD
RGRQTGRPKTIYMALEKRYVFTLEDCDSVAPMYEYLIRQTVNKPWIMEHL
PLDFPQYFEYDRCKQLVLMKIISR*

IP09210.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 12:29:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10191-PA 277 GF10191-PA 1..277 1..274 1149 77.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 12:29:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG13265-PA 274 GG13265-PA 1..274 1..274 1369 93.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 12:29:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15841-PA 275 GH15841-PA 1..275 1..274 972 64.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:57:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG10584-PA 274 CG10584-PA 1..274 1..274 1418 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 12:29:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI12623-PA 277 GI12623-PA 1..277 1..274 1006 66.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 12:29:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL26204-PA 262 GL26204-PA 1..254 1..249 990 73.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 12:29:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10415-PA 279 GA10415-PA 1..279 1..274 1117 74.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 12:29:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM22169-PA 274 GM22169-PA 1..274 1..274 1401 96.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 12:29:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12146-PA 274 GD12146-PA 1..274 1..274 1404 96.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 12:29:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12745-PA 277 GJ12745-PA 1..277 1..274 1048 69 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 12:29:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13435-PA 281 GK13435-PA 1..281 1..274 989 67.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 12:29:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE22721-PA 274 GE22721-PA 1..274 1..274 1384 95.3 Plus
Dyak\GE22363-PA 274 GE22363-PA 1..274 1..274 1374 94.9 Plus

IP09210.hyp Sequence

Translation from 111 to 935

> IP09210.hyp
MFTVTSEIYGENNYQTTRDGGKVLSKFRFVYPEEKLAGIRTDKDGDLEVP
RPKRGVIELEHSEATELRLVGLQVWRGALLLADYLFSKKDEFSQKTLMEL
GAGVGLTSIAAGIHNNGRIYCTDVDLGCILKLIRGNVQRNSKLLRATISV
LEFDFLASKEDHSQDLLEAIDNSDIILAADVIYCDTLTDAFICVLDNLLD
RGRQTGRPKTIYMALEKRYVFTLEDCDSVAPMYEYLIRQTVNKPWIMEHL
PLDFPQYFEYDRCKQLVLMKIISR*

IP09210.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:00:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG10584-PA 274 CG10584-PA 1..274 1..274 1418 100 Plus