Clone IP09275 Report

Search the DGRC for IP09275

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:92
Well:75
Vector:pOT2
Associated Gene/TranscriptCG14285-RA
Protein status:IP09275.pep: gold
Preliminary Size:894
Sequenced Size:991

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG14285 2008-04-29 Release 5.5 accounting
CG14285 2008-08-15 Release 5.9 accounting
CG14285 2008-12-18 5.12 accounting

Clone Sequence Records

IP09275.complete Sequence

991 bp (991 high quality bases) assembled on 2006-01-26

GenBank Submission: BT024352

> IP09275.complete
AGCAAATGGCCAACAACGCCCGCATCGAGCACACGTCCTCCGAGGGTCAT
GAAGGGGACGCCACATGCGTGGCGTACTTCGATGGACAGCTGTTCTCCGG
AGGCGCTGACGGTAAAATACGAATCTGGTCACCGGAACTGCAACTATTGG
CCACTGTAAACGCTCACGAGGCGTACATATACTGCATGGCCATTAATCAG
CACGGAAAGGTCTACTCGAGCAGCTGTGATGGCCAGGTTCACTTCATGCT
GCCTCCCTATGGAGACGAGTCAGTGCAGGAACTATTCCGCTGCGACGACG
CCATCCAGGCCATGTACTGCGACGGATCCGTGCTTTACACGGGCGATGAC
AAGGGTGTGGTGACCACTTGGACCAACGATCGCATGCTCTTCAAGTACAG
CCTGGTGGAGGAGGTCAAGTCACTGGCCGGCGAGCAGAATCTCATTTACA
CTGTTCGCGACCTGGACGTGGTGGTGTCTCAGGTGGCGGAGGGCAAGTCT
GGAAAGTACAGCAACAAGGCGGTGATTCCAGGTAAGTCTCCGCTCCATCT
TCTCGGGCCCATGGTGGATGGCAAGCGGAGCTATCTGGCCTTTCCCGATC
GCTCTGGGATGGGTTTGCAACTGGTCAACAATCTTTCGCAGCAACAGTAC
TCCAAAATTTGGCACTTGCCGGACTGCCATGAGTTGATCATAAACGCCCT
TTGCGGAGATGAGACCTATTTGTACTCCGGCGGCTATGACAAAAAGGTTA
AGGGATGGACCGATCTGGAAGCAGGAAAGCCAAAAGCCCTGGGCGAGGTG
GAGGTGGGCAGTTGTGTGAACAGCATTTGCTGTGGAGCCAACGACACGGT
ATACATAGCAAGCAGCGACGGATTCATTCGCAGTGCGAAGTTCGTATAAT
TTTATTGGCCATCTTGTCGTCTCAGAGAATAGAAAACCCTTGTAACAATT
AAACAGAATTTATTAAAAGCTTTAAAAAAAAAAAAAAAAAA

IP09275.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:19:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG14285-RA 1014 CG14285-RA 19..996 1..978 4875 99.8 Plus
gatA-RA 1740 gatA-RA 1635..1740 978..873 515 99 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 06:00:39
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 14849277..14849826 123..672 2690 99.3 Plus
chr3R 27901430 chr3R 14849884..14850186 671..973 1470 99 Plus
chr3R 27901430 chr3R 14849098..14849219 1..122 550 96.7 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:57:42 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 06:00:37
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 19025294..19025843 123..672 2750 100 Plus
3R 32079331 3R 19025901..19026208 671..978 1525 99.7 Plus
3R 32079331 3R 19025115..19025236 1..122 610 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:12:02
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 18766125..18766674 123..672 2750 100 Plus
3R 31820162 3R 18766732..18767039 671..978 1525 99.6 Plus
3R 31820162 3R 18765946..18766067 1..122 610 100 Plus
Blast to na_te.dros performed 2019-03-16 06:00:38
Subject Length Description Subject Range Query Range Score Percent Strand
invader1 4032 invader1 INVADER 4032bp 3535..3574 972..933 110 75 Minus

IP09275.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 06:01:20 Download gff for IP09275.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 14849098..14849219 1..122 96 -> Plus
chr3R 14849277..14849825 123..671 99 -> Plus
chr3R 14849885..14850186 672..973 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:38:54 Download gff for IP09275.complete
Subject Subject Range Query Range Percent Splice Strand
CG14285-RA 1..894 6..899 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:33:25 Download gff for IP09275.complete
Subject Subject Range Query Range Percent Splice Strand
CG14285-RA 1..894 6..899 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 09:43:45 Download gff for IP09275.complete
Subject Subject Range Query Range Percent Splice Strand
CG14285-RA 1..894 6..899 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:07:34 Download gff for IP09275.complete
Subject Subject Range Query Range Percent Splice Strand
CG14285-RA 1..894 6..899 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:10:56 Download gff for IP09275.complete
Subject Subject Range Query Range Percent Splice Strand
CG14285-RA 1..894 6..899 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:04:50 Download gff for IP09275.complete
Subject Subject Range Query Range Percent Splice Strand
CG14285-RA 1..973 1..973 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:33:25 Download gff for IP09275.complete
Subject Subject Range Query Range Percent Splice Strand
CG14285-RA 1..973 1..973 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:43:45 Download gff for IP09275.complete
Subject Subject Range Query Range Percent Splice Strand
CG14285-RA 1..973 1..973 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:07:35 Download gff for IP09275.complete
Subject Subject Range Query Range Percent Splice Strand
CG14285-RA 1..973 1..973 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:10:56 Download gff for IP09275.complete
Subject Subject Range Query Range Percent Splice Strand
CG14285-RA 17..989 1..973 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:01:20 Download gff for IP09275.complete
Subject Subject Range Query Range Percent Splice Strand
3R 19025115..19025236 1..122 100 -> Plus
3R 19025294..19025842 123..671 100 -> Plus
3R 19025902..19026203 672..973 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:01:20 Download gff for IP09275.complete
Subject Subject Range Query Range Percent Splice Strand
3R 19025115..19025236 1..122 100 -> Plus
3R 19025294..19025842 123..671 100 -> Plus
3R 19025902..19026203 672..973 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:01:20 Download gff for IP09275.complete
Subject Subject Range Query Range Percent Splice Strand
3R 19025115..19025236 1..122 100 -> Plus
3R 19025294..19025842 123..671 100 -> Plus
3R 19025902..19026203 672..973 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:43:45 Download gff for IP09275.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 14850837..14850958 1..122 100 -> Plus
arm_3R 14851016..14851564 123..671 100 -> Plus
arm_3R 14851624..14851925 672..973 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:57:53 Download gff for IP09275.complete
Subject Subject Range Query Range Percent Splice Strand
3R 18765946..18766067 1..122 100 -> Plus
3R 18766733..18767034 672..973 100   Plus
3R 18766125..18766673 123..671 100 -> Plus

IP09275.hyp Sequence

Translation from 2 to 898

> IP09275.hyp
QMANNARIEHTSSEGHEGDATCVAYFDGQLFSGGADGKIRIWSPELQLLA
TVNAHEAYIYCMAINQHGKVYSSSCDGQVHFMLPPYGDESVQELFRCDDA
IQAMYCDGSVLYTGDDKGVVTTWTNDRMLFKYSLVEEVKSLAGEQNLIYT
VRDLDVVVSQVAEGKSGKYSNKAVIPGKSPLHLLGPMVDGKRSYLAFPDR
SGMGLQLVNNLSQQQYSKIWHLPDCHELIINALCGDETYLYSGGYDKKVK
GWTDLEAGKPKALGEVEVGSCVNSICCGANDTVYIASSDGFIRSAKFV*

IP09275.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:01:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG14285-PA 297 CG14285-PA 1..297 2..298 1584 100 Plus

IP09275.pep Sequence

Translation from 5 to 898

> IP09275.pep
MANNARIEHTSSEGHEGDATCVAYFDGQLFSGGADGKIRIWSPELQLLAT
VNAHEAYIYCMAINQHGKVYSSSCDGQVHFMLPPYGDESVQELFRCDDAI
QAMYCDGSVLYTGDDKGVVTTWTNDRMLFKYSLVEEVKSLAGEQNLIYTV
RDLDVVVSQVAEGKSGKYSNKAVIPGKSPLHLLGPMVDGKRSYLAFPDRS
GMGLQLVNNLSQQQYSKIWHLPDCHELIINALCGDETYLYSGGYDKKVKG
WTDLEAGKPKALGEVEVGSCVNSICCGANDTVYIASSDGFIRSAKFV*

IP09275.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 19:11:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF18593-PA 297 GF18593-PA 1..297 1..297 1351 83.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 19:11:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG23112-PA 311 GG23112-PA 15..311 1..297 1528 95.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 19:11:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH18898-PA 297 GH18898-PA 3..297 4..297 1241 75.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:05:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG14285-PA 297 CG14285-PA 1..297 1..297 1584 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 19:11:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI23113-PA 296 GI23113-PA 3..296 4..297 1291 78.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 19:11:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL13573-PA 297 GL13573-PA 1..297 1..297 1315 80.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 19:11:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA12880-PA 297 GA12880-PA 1..297 1..297 1315 80.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 19:12:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM23274-PA 297 GM23274-PA 1..297 1..297 1545 96.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 19:12:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD19264-PA 293 GD19264-PA 1..293 1..297 1520 96.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 19:12:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ10603-PA 296 GJ10603-PA 3..296 4..297 1317 80.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 19:12:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13571-PA 295 GK13571-PA 3..295 6..297 1259 78.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 19:12:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE25575-PA 311 GE25575-PA 15..311 1..297 1527 95.3 Plus