Clone IP09281 Report

Search the DGRC for IP09281

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:92
Well:81
Vector:pOT2
Associated Gene/TranscriptCG14556-RB
Protein status:IP09281.pep: gold
Preliminary Size:939
Sequenced Size:1279

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG14556 2005-01-01 Successful iPCR screen
CG14556 2008-04-29 Release 5.5 accounting
CG14556 2008-08-15 Release 5.9 accounting
CG14556 2008-12-18 5.12 accounting

Clone Sequence Records

IP09281.complete Sequence

1279 bp (1279 high quality bases) assembled on 2006-04-14

GenBank Submission: BT025123

> IP09281.complete
AATTAAAGTACAAAACAGGAACAGAGTTCTTTCTTAGTCATGGAACTTGA
AAACGTTAAAAGTTTGGGGGAAATTGCTAAATGTGCAAAGATGCCATTAA
ACGAAATGGATCTCATATCCCGAACTTCGAAATGTGGAAAAAGTGTTTTA
GAAATCTTCGACGTCGATGAGAAGGTCAGTTTCTCATATGATGGAGGTGA
GGAGGAAGAAATGGATATTCTCGATCGTTCAGAGCAGTCTGATGATCGAC
CAGTGAAAATGGCACACGATATTGACTGCCTGATTCGACAGATTGAGCTT
ATGCAAATAGCGATTAGGAAGCGTCAAGTTAAGAAGTGCAGCGAAGAAAT
TAGCGAAGAAACTGCTGAAATAGAAATAGAAGCCGGTGCTCAAGTAAAGT
GCAAACAGCGGAAAAACCAAGGAATCGACATTAAGATTAAGGAAAAGTCT
GTAGCCATTTGTCCGAATAACCAACCTTTGTGCGGCAATGAATTGCTGGA
AGCCAGGAGTCTTCGTCAGGCCCACAATCGCATTCAATTGCAAATAGACG
AACTGATCTGCAGGTATAGGAAACTCCGCGAAATCATCCACCAAATGCGC
GAAAGGATTCGCTGCATGGAAGGCAATCTTATAGATTTAAATTCTGAAGC
CGTTAAGTATGTAGCTTGGTCCAGCGAAGTTTCCAAGGAACTGAAGTTGT
GCCAGGAGCGATACAATTACCTTGTCAATGCCAAGATGTCCAAAGCGGAT
GCAAAAAAACTAGACCACGCTCACACCACACGATTCCTTAAACAAAATGC
AGCTTGCCTTTCCAAAAGTCGTCTAAAGCGCGAAATCGCTGATTTCAATG
GCGAGGTCAAGGATCTTGTGAATCTAATGAGTGAATTGCACAAGGAACTG
GATCGGAATATGGCTGTTTTCGAATCACGGCATTCGAATTTTCTTGATGA
TCCAGAAGAGTTTCTATCATCCTTGACTGTGACGGTTAGACTATCCGATG
AGTTCCGGAAGTCACAAATGAAACTTGAAGACAGCGCCAATTAGAATTTG
ATCATTAAAATAGCTTTATTTATTGTTAAGGGAAATATTTCATATTAGCA
CCATTATTTCGACCAAAAATTACTAATAATAAAAATATATAAATCGGTCT
TCGTATTAAAAACAATAAAAATAAATTACGTAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAA

IP09281.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:28:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG14556-RB 1185 CG14556-RB 1..1185 1..1185 5925 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 19:14:35
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 21949694..21950874 1..1181 5905 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:57:44 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 19:14:33
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 26126688..26127872 1..1185 5925 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:19:39
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 25867519..25868703 1..1185 5925 100 Plus
Blast to na_te.dros performed on 2019-03-16 19:14:33 has no hits.

IP09281.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 19:15:16 Download gff for IP09281.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 21949694..21950874 1..1181 97   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:38:58 Download gff for IP09281.complete
Subject Subject Range Query Range Percent Splice Strand
CG14556-RB 1..1005 40..1044 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:50:44 Download gff for IP09281.complete
Subject Subject Range Query Range Percent Splice Strand
CG14556-RB 1..1005 40..1044 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:34:18 Download gff for IP09281.complete
Subject Subject Range Query Range Percent Splice Strand
CG14556-RB 1..1005 40..1044 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:31:28 Download gff for IP09281.complete
Subject Subject Range Query Range Percent Splice Strand
CG14556-RB 1..1005 40..1044 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:24:39 Download gff for IP09281.complete
Subject Subject Range Query Range Percent Splice Strand
CG14556-RB 1..1005 40..1044 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:24:26 Download gff for IP09281.complete
Subject Subject Range Query Range Percent Splice Strand
CG14556-RB 1..1181 1..1181 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:50:43 Download gff for IP09281.complete
Subject Subject Range Query Range Percent Splice Strand
CG14556-RB 1..1181 1..1181 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:34:18 Download gff for IP09281.complete
Subject Subject Range Query Range Percent Splice Strand
CG14556-RB 30..1210 1..1181 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:31:28 Download gff for IP09281.complete
Subject Subject Range Query Range Percent Splice Strand
CG14556-RB 1..1181 1..1181 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:24:39 Download gff for IP09281.complete
Subject Subject Range Query Range Percent Splice Strand
CG14556-RB 30..1210 1..1181 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:15:16 Download gff for IP09281.complete
Subject Subject Range Query Range Percent Splice Strand
3R 26126688..26127868 1..1181 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:15:16 Download gff for IP09281.complete
Subject Subject Range Query Range Percent Splice Strand
3R 26126688..26127868 1..1181 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:15:16 Download gff for IP09281.complete
Subject Subject Range Query Range Percent Splice Strand
3R 26126688..26127868 1..1181 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:34:18 Download gff for IP09281.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 21952410..21953590 1..1181 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:09:55 Download gff for IP09281.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25867519..25868699 1..1181 100   Plus

IP09281.pep Sequence

Translation from 39 to 1043

> IP09281.pep
MELENVKSLGEIAKCAKMPLNEMDLISRTSKCGKSVLEIFDVDEKVSFSY
DGGEEEEMDILDRSEQSDDRPVKMAHDIDCLIRQIELMQIAIRKRQVKKC
SEEISEETAEIEIEAGAQVKCKQRKNQGIDIKIKEKSVAICPNNQPLCGN
ELLEARSLRQAHNRIQLQIDELICRYRKLREIIHQMRERIRCMEGNLIDL
NSEAVKYVAWSSEVSKELKLCQERYNYLVNAKMSKADAKKLDHAHTTRFL
KQNAACLSKSRLKREIADFNGEVKDLVNLMSELHKELDRNMAVFESRHSN
FLDDPEEFLSSLTVTVRLSDEFRKSQMKLEDSAN*

IP09281.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 13:57:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF20335-PA 332 GF20335-PA 26..298 8..292 194 25.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 13:57:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18510-PA 334 GG18510-PA 21..294 4..288 173 22.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 13:57:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH24276-PA 326 GH24276-PA 14..324 6..296 362 31 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:14:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG14556-PB 334 CG14556-PB 1..334 1..334 1695 100 Plus
CG15468-PA 290 CG15468-PA 66..248 119..301 194 25.8 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 13:57:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI21587-PA 334 GI21587-PA 11..308 7..287 358 32.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 13:57:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA13078-PB 342 GA13078-PB 6..302 12..302 424 35.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 13:57:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM10308-PA 509 GM10308-PA 61..306 37..280 1126 88.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 13:57:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ15807-PA 341 GJ15807-PA 12..341 7..318 393 33.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 13:57:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK24905-PA 286 GK24905-PA 11..281 9..307 226 27 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 13:57:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE23656-PA 521 GE23656-PA 79..318 38..280 827 68.3 Plus
Dyak\GE16827-PA 351 GE16827-PA 21..294 4..288 174 22 Plus

IP09281.hyp Sequence

Translation from 39 to 1043

> IP09281.hyp
MELENVKSLGEIAKCAKMPLNEMDLISRTSKCGKSVLEIFDVDEKVSFSY
DGGEEEEMDILDRSEQSDDRPVKMAHDIDCLIRQIELMQIAIRKRQVKKC
SEEISEETAEIEIEAGAQVKCKQRKNQGIDIKIKEKSVAICPNNQPLCGN
ELLEARSLRQAHNRIQLQIDELICRYRKLREIIHQMRERIRCMEGNLIDL
NSEAVKYVAWSSEVSKELKLCQERYNYLVNAKMSKADAKKLDHAHTTRFL
KQNAACLSKSRLKREIADFNGEVKDLVNLMSELHKELDRNMAVFESRHSN
FLDDPEEFLSSLTVTVRLSDEFRKSQMKLEDSAN*

IP09281.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:01:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG14556-PB 334 CG14556-PB 1..334 1..334 1695 100 Plus
SIP3-PA 290 CG15468-PA 66..248 119..301 194 25.8 Plus