Clone IP09322 Report

Search the DGRC for IP09322

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:93
Well:22
Vector:pOT2
Associated Gene/TranscriptCG11588-RA
Protein status:IP09322.pep: gold
Preliminary Size:886
Sequenced Size:917

Clone Sequence Records

IP09322.complete Sequence

917 bp assembled on 2011-08-31

GenBank Submission: BT128861.1

> IP09322.complete
ATTATACAATTCGTTGGGAGGATGACGTCAAGGCTAATCCTTCTTCTATC
GGTCTTTGGGGTTATTCCAAACGCGATGATCCCGAAAAGTCCAGTCAATA
TCGATGTATGTCCCCGATCATCCCGGAAATCAGAGTCTAGCTATTTGATG
GCCGAATATGGAGATGGATTAATTACCCGCATTGATGAGGGCAACTGGAA
GGAAGTGCTTACTGGCGAGTGGCTTTTGCTAATCTGTTCGTCACACCAGC
CGAGTTGCGGAGATTGGAAAGCGGTCTTATACCAGCTGGCTAGCACCTCA
ATGGGTTGCCTCGATGTGGACTTGGCTTTTGGTGATCTCTCCACCAATTT
TTGGCTAAGGGGACGATTTTCCGCCTTTCGGGAGGCTAACGTGTACCATG
TGGTGGATGGGGAATTTCGGAGACTGAGCTCCAGCCACGATACTAACTCC
ATTCTCAATCTTTTGCTTCTGCGCGAATGGTCAGAGTTACCTCCAATGCC
ATTTTGGTTACATCCGACCTCCACATGGAGCACATCCGCCGAATTTGTTT
TAAAAACGGCCGTGGATCTAAAGGACTTGGATATTCTTGGGCGCAACGCT
TGGAAGACCGCCCTTATTCTGGACTTAATTTTTTTCATCGTAACACCGTA
CATTTTATGGCTTACTATAATGACAACTACGGAGAATATGATGGTGAATG
ATGAATTTAAGCTAGGACCAACCGAAAGTAGTAGTCCACTTCCGCTGAAA
TCGATTTCTAAAATTAAAAGCACAACTCCAATATTTTTACAGAAGCTAAG
ACAACTGAGAGAATCTAAGTTCAAAAGTATTTAAAATTTATATGTTTCCT
TTTACGATTTTCTTTTACAATCGCCGAATTAGACCCAAAAATTAAAAAAA
AAAAAAAAAAAAAAAAA

IP09322.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 10:58:41
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 11912420..11913312 1..893 4450 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 10:58:39
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 11921595..11922489 1..895 4475 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:01:11
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 11914695..11915589 1..895 4475 100 Plus
Blast to na_te.dros performed on 2019-03-15 10:58:39 has no hits.

IP09322.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 10:59:21 Download gff for IP09322.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 11912420..11913312 1..893 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-08-31 17:39:36 Download gff for IP09322.complete
Subject Subject Range Query Range Percent Splice Strand
CG11588-RA 1..813 22..834 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:31:45 Download gff for IP09322.complete
Subject Subject Range Query Range Percent Splice Strand
CG11588-RA 1..813 22..834 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:18:05 Download gff for IP09322.complete
Subject Subject Range Query Range Percent Splice Strand
CG11588-RA 1..813 22..834 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-31 17:39:35 Download gff for IP09322.complete
Subject Subject Range Query Range Percent Splice Strand
CG11588-RA 30..886 1..857 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:31:45 Download gff for IP09322.complete
Subject Subject Range Query Range Percent Splice Strand
CG11588-RA 83..975 1..893 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:18:05 Download gff for IP09322.complete
Subject Subject Range Query Range Percent Splice Strand
CG11588-RA 83..975 1..893 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:59:21 Download gff for IP09322.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11921595..11922487 1..893 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:59:21 Download gff for IP09322.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11921595..11922487 1..893 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:59:21 Download gff for IP09322.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11921595..11922487 1..893 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:31:45 Download gff for IP09322.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 11914695..11915587 1..893 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:47:35 Download gff for IP09322.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11914695..11915587 1..893 100   Plus

IP09322.pep Sequence

Translation from 0 to 833

> IP09322.pep
IIQFVGRMTSRLILLLSVFGVIPNAMIPKSPVNIDVCPRSSRKSESSYLM
AEYGDGLITRIDEGNWKEVLTGEWLLLICSSHQPSCGDWKAVLYQLASTS
MGCLDVDLAFGDLSTNFWLRGRFSAFREANVYHVVDGEFRRLSSSHDTNS
ILNLLLLREWSELPPMPFWLHPTSTWSTSAEFVLKTAVDLKDLDILGRNA
WKTALILDLIFFIVTPYILWLTIMTTTENMMVNDEFKLGPTESSSPLPLK
SISKIKSTTPIFLQKLRQLRESKFKSI*

IP09322.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 19:30:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF12510-PA 322 GF12510-PA 36..173 56..194 175 27.3 Plus
Dana\GF25301-PA 437 GF25301-PA 78..184 105..207 159 34.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 19:30:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15540-PA 250 GG15540-PA 1..239 8..254 649 57.7 Plus
Dere\GG22892-PA 323 GG22892-PA 36..173 56..194 168 27.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 19:30:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH22879-PA 219 GH22879-PA 37..172 55..191 180 29.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:33:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG11588-PB 270 CG11588-PB 1..270 8..277 1406 100 Plus
CG11588-PA 270 CG11588-PA 1..270 8..277 1406 100 Plus
CG5554-PA 323 CG5554-PA 36..173 56..194 180 28.1 Plus
CG5554-PB 330 CG5554-PB 36..170 56..191 173 27.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 19:30:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI21260-PA 333 GI21260-PA 38..177 54..194 186 29.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 19:30:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL11037-PA 316 GL11037-PA 29..171 56..199 167 27.1 Plus
Dper\GL10278-PA 254 GL10278-PA 22..190 35..214 161 24.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 19:30:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA18965-PA 316 GA18965-PA 29..171 56..199 167 27.1 Plus
Dpse\GA28663-PA 254 GA28663-PA 22..190 35..214 162 24.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 19:30:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM25307-PA 274 GM25307-PA 1..274 8..277 1214 84 Plus
Dsec\GM16051-PA 322 GM16051-PA 36..173 56..194 174 28.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 19:30:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD14338-PA 273 GD14338-PA 1..273 8..277 1203 83.2 Plus
Dsim\GD11801-PA 322 GD11801-PA 36..173 56..194 174 28.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 19:30:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ20862-PA 331 GJ20862-PA 38..176 55..194 188 30.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 19:30:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK19127-PA 254 GK19127-PA 49..218 58..220 250 34.1 Plus
Dwil\GK16016-PA 153 GK16016-PA 9..142 96..224 177 34.3 Plus
Dwil\GK15815-PA 346 GK15815-PA 49..189 58..199 167 28.2 Plus
Dwil\GK17161-PA 269 GK17161-PA 64..268 61..249 145 23.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 19:30:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21862-PA 268 GE21862-PA 1..268 8..277 734 58.1 Plus
Dyak\GE14330-PA 323 GE14330-PA 36..173 56..194 168 27.3 Plus

IP09322.hyp Sequence

Translation from 0 to 833

> IP09322.hyp
IIQFVGRMTSRLILLLSVFGVIPNAMIPKSPVNIDVCPRSSRKSESSYLM
AEYGDGLITRIDEGNWKEVLTGEWLLLICSSHQPSCGDWKAVLYQLASTS
MGCLDVDLAFGDLSTNFWLRGRFSAFREANVYHVVDGEFRRLSSSHDTNS
ILNLLLLREWSELPPMPFWLHPTSTWSTSAEFVLKTAVDLKDLDILGRNA
WKTALILDLIFFIVTPYILWLTIMTTTENMMVNDEFKLGPTESSSPLPLK
SISKIKSTTPIFLQKLRQLRESKFKSI*

IP09322.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:15:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG11588-PB 270 CG11588-PB 1..270 8..277 1406 100 Plus
CG11588-PA 270 CG11588-PA 1..270 8..277 1406 100 Plus
CG5554-PA 323 CG5554-PA 36..173 56..194 180 28.1 Plus
CG5554-PB 330 CG5554-PB 36..170 56..191 173 27.9 Plus