Clone IP09348 Report

Search the DGRC for IP09348

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:93
Well:48
Vector:pOT2
Associated Gene/TranscriptCG13144-RA
Protein status:IP09348.pep: gold
Preliminary Size:876
Sequenced Size:1561

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG13144 2008-04-29 Release 5.5 accounting
CG13144 2008-08-15 Release 5.9 accounting
CG13144 2008-12-18 5.12 accounting

Clone Sequence Records

IP09348.complete Sequence

1561 bp (1561 high quality bases) assembled on 2006-04-12

GenBank Submission: BT025122

> IP09348.complete
GAACGCGTGCAATTCGGAGCATCGAAGCACCCAAGGTGATTACATAAAGC
CAGAAAACCAGAACCATGCAGAAGGCCATCAAGAAGGAGCTCAGCTTCTC
GCTGGACACGCTGGAGCGCTATAGGGCCAAGTACGGACGCAGTGCATCGC
TGGACACAAACGGCACACCAATTGCACACACAGACGGCGACCAGGCTGCT
CCTGCGCCGCCACCGCCCTCGATCTTCACAAAGTCGTTGTCGCCACCAAA
GATGACCAAGCTTCAGGAGTTGCAGCAGAAGAAGGAGGCCTATTTAAGGG
CCAAGGAGCACGAGCGGGAAATGGAGCAGCTGCAGCGCACAGAAAGAAGG
TCCATCATAAATGGTTCGGATACGCCCAAGCCCAAGACAGGCAGTCCAAC
GAGCACTTCACCGACTCCCAATGCAAGTTCCTCGTCAACCGCTGCCGTGG
CTACCAAGACCTCCAGTCCAGCTGGCTACACCAACTGGTCGAATCACCAT
GCCACACTCTGCTCCCAGTCGTGGGTGGCCATCTCCGAGCTCATGTACTT
TTGCGACAAGTATGAGTTCACCACCCTCAGCACACGCGATCTGAGGACGC
ACCAGGAGATCGTGGCCGAGGTGAGAGCTCTGCTGTCCGGCAAGGCGCCC
TTCGATCAACGCACCCGCTTCCCGGGTAACATTCACGATCCGGAGAACTT
GTGGGTTTGCATCGGTCGCTGTGCCAGCGTGGAATACCATCTGCAGCGCA
TCATCAGCATCTTTCGCAAACCTCTCAATCAATTGACACCGGACAAACAG
CGAACGGTGCGTCAGAATTTCCACCTGGCGGTCAGCGAACTGCGGCTGGA
CATCTCGGCGAGGATTAGCGAGGTGCGGCTGTACGATCGCCTGGTCTTTG
AGCGCGAGTTCCGGCTGGAGTGGCTGGATGAGGAGGCCTAGTGGATTAAA
TGGTTTAAAGGATGAGTTAGGTGGACAATAACGTTTATTGGCAATTCTTC
GCTCTTTTTTGCGGTGCGCGGTGGAAAAAACGGTTACAAAAATACACTTG
GACACAGGAGGCCGGAGCATGGAGCACACGACTATGGTAACCAGTGTGCT
GGCTGCTCCATTCAACATACATATAAGGGGTATCTCGTCAACTGATCATC
ATTATGATTTCTTTGGCTGCAATTGATTTGCTTAGTAGTTAACGTAAGGA
ACATTTTCAATCAGAAAGATTTTACATAAATTCTGTGTAGATTCTATTGT
ACAAAGCATTAGGACAATCATAATCAAAATCAGTTGTCGCACATGCCCAT
ATACAAAGTTAACCACATATTTCACAAATCTAGGCCATGGATTCCTGCAA
CAACTGCTCGCACAACTAAATCTAAAGGCCGCCGGCGGTCAGGTGGAATC
TGAGGATACAGCTCGAGCCTGTCCGCCGATCAGGACAACTTATTGCTCCG
TAATACGTAATACAAACATTTATATATATGTACACAATGCTAGCGGTATA
AATAAAGCACTTTTGTGTGGGCCAACATGGAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAA

IP09348.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:29:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG13144-RA 1530 CG13144-RA 1..1530 1..1530 7650 100 Plus
CG6144-RB 1722 CG6144-RB 1158..1722 1531..967 2825 100 Minus
CG6144-RA 1722 CG6144-RA 1158..1722 1531..967 2825 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 07:43:46
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 10488729..10490259 1530..1 7575 99.8 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:57:55 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 07:43:44
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10489899..10491429 1531..1 7655 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:20:16
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10489899..10491429 1531..1 7655 100 Minus
Blast to na_te.dros performed on 2019-03-16 07:43:45 has no hits.

IP09348.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 07:44:23 Download gff for IP09348.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 10488729..10490259 1..1530 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:39:15 Download gff for IP09348.complete
Subject Subject Range Query Range Percent Splice Strand
CG13144-RA 1..876 66..941 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:51:38 Download gff for IP09348.complete
Subject Subject Range Query Range Percent Splice Strand
CG13144-RA 1..876 66..941 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:34:27 Download gff for IP09348.complete
Subject Subject Range Query Range Percent Splice Strand
CG13144-RA 1..876 66..941 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:32:19 Download gff for IP09348.complete
Subject Subject Range Query Range Percent Splice Strand
CG13144-RA 1..876 66..941 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:40:47 Download gff for IP09348.complete
Subject Subject Range Query Range Percent Splice Strand
CG13144-RA 1..876 66..941 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:25:41 Download gff for IP09348.complete
Subject Subject Range Query Range Percent Splice Strand
CG13144-RA 1..876 66..941 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:51:38 Download gff for IP09348.complete
Subject Subject Range Query Range Percent Splice Strand
CG13144-RA 1..1530 1..1530 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:34:27 Download gff for IP09348.complete
Subject Subject Range Query Range Percent Splice Strand
CG13144-RA 1..1530 1..1530 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:32:19 Download gff for IP09348.complete
Subject Subject Range Query Range Percent Splice Strand
CG13144-RA 1..876 66..941 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:40:47 Download gff for IP09348.complete
Subject Subject Range Query Range Percent Splice Strand
CG13144-RA 26..1555 1..1530 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:44:23 Download gff for IP09348.complete
Subject Subject Range Query Range Percent Splice Strand
2L 10489900..10491429 1..1530 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:44:23 Download gff for IP09348.complete
Subject Subject Range Query Range Percent Splice Strand
2L 10489900..10491429 1..1530 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:44:23 Download gff for IP09348.complete
Subject Subject Range Query Range Percent Splice Strand
2L 10489900..10491429 1..1530 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:34:27 Download gff for IP09348.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 10489900..10491429 1..1530 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:10:52 Download gff for IP09348.complete
Subject Subject Range Query Range Percent Splice Strand
2L 10489900..10491429 1..1530 100   Minus

IP09348.hyp Sequence

Translation from 65 to 940

> IP09348.hyp
MQKAIKKELSFSLDTLERYRAKYGRSASLDTNGTPIAHTDGDQAAPAPPP
PSIFTKSLSPPKMTKLQELQQKKEAYLRAKEHEREMEQLQRTERRSIING
SDTPKPKTGSPTSTSPTPNASSSSTAAVATKTSSPAGYTNWSNHHATLCS
QSWVAISELMYFCDKYEFTTLSTRDLRTHQEIVAEVRALLSGKAPFDQRT
RFPGNIHDPENLWVCIGRCASVEYHLQRIISIFRKPLNQLTPDKQRTVRQ
NFHLAVSELRLDISARISEVRLYDRLVFEREFRLEWLDEEA*

IP09348.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:02:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG13144-PA 291 CG13144-PA 1..291 1..291 1512 100 Plus

IP09348.pep Sequence

Translation from 65 to 940

> IP09348.pep
MQKAIKKELSFSLDTLERYRAKYGRSASLDTNGTPIAHTDGDQAAPAPPP
PSIFTKSLSPPKMTKLQELQQKKEAYLRAKEHEREMEQLQRTERRSIING
SDTPKPKTGSPTSTSPTPNASSSSTAAVATKTSSPAGYTNWSNHHATLCS
QSWVAISELMYFCDKYEFTTLSTRDLRTHQEIVAEVRALLSGKAPFDQRT
RFPGNIHDPENLWVCIGRCASVEYHLQRIISIFRKPLNQLTPDKQRTVRQ
NFHLAVSELRLDISARISEVRLYDRLVFEREFRLEWLDEEA*

IP09348.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 14:02:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF14091-PA 296 GF14091-PA 1..296 1..291 1206 77.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 14:02:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG10381-PA 291 GG10381-PA 1..291 1..291 1404 96.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 14:02:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH10477-PA 335 GH10477-PA 1..334 1..289 1106 67.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:18:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG13144-PA 291 CG13144-PA 1..291 1..291 1512 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 14:03:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15971-PA 321 GI15971-PA 1..320 1..289 985 64.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 14:03:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL19530-PA 299 GL19530-PA 1..299 1..291 1166 78.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 14:03:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA12077-PA 299 GA12077-PA 1..299 1..291 1182 78.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 14:03:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM11641-PA 291 GM11641-PA 1..291 1..291 1524 97.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 14:03:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22249-PA 291 GD22249-PA 1..291 1..291 1524 97.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 14:03:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ10444-PA 309 GJ10444-PA 1..308 1..289 1033 68.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 14:03:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK21238-PA 316 GK21238-PA 1..316 1..291 1126 71.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 14:03:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE13572-PA 291 GE13572-PA 1..291 1..291 1457 96.2 Plus