Clone IP09370 Report

Search the DGRC for IP09370

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:93
Well:70
Vector:pOT2
Associated Gene/TranscriptCG14079-RA
Protein status:IP09370.pep: gold
Preliminary Size:810
Sequenced Size:1028

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG14079 2008-04-29 Release 5.5 accounting
CG14079 2008-08-15 Release 5.9 accounting
CG14079 2008-12-18 5.12 accounting

Clone Sequence Records

IP09370.complete Sequence

1028 bp (1028 high quality bases) assembled on 2005-06-08

GenBank Submission: BT023590

> IP09370.complete
CGTTATCGACCAGTAATCGACTTTGAAATTCACTTTCAACCGCTGCCCCG
GCAACCAGTGGGCTCCAAAACAAAGAACCATGCGCTTTCGCCCCCCAATT
CTCGATTCCCGCCCCAAGCAGTTGGCTATTTTCCGGCAGACTTTCACTTA
GGATCAGGCAGCAAATGTCCCACAAGAGATTCTACGTAAAGTTAGATCTG
CAGCTCCATGCGCTCACTTGTCCCGGTGTTTGGCTTTGTTCACACGGATA
TTTGGAGGCCACCATCAAGACCTTGGGCTACTACTTTCGAACTGGACCCA
TGGAGCCTCGCTTTCCGATGCTGTGCCACGATCAGTTCACGATGGAGGGA
TACTTCAAGAGCGTGGGCTGCCTGGAGGAGATGCACGAGCTACTGAAAGC
TGAACAGCTGGAGATAACCGTCTGGCAGAATGGCCGAAGGTTGGCCTACT
TCGTGGGCAGTCTTTCGGATGTGATGCAACCCACTTTTCCGCGCCTGAGC
TGTGCCCACAGCTCCAATGTTCAGCTGTTGATGAAGGCGACGCCTGCTTT
TCCGGGTATCCTGGCGCCCAAGGTGGAGCTATCTGCGCAGTTGACCACGC
AGGATCGGAAAAAGGTGTGCAGCTGCTCCAGTTCCAGGGAGTACTCTGCT
CCTCCTGTCAATCGCCACGTTGAGAGCCGTTGCCTGGGCCATTTGGATCA
GCCTCGAAAGCAGCAAACCGTGTGTCATGGGAGGCAATCCAATTGTTGTC
CAAGTGGCAGTTACGCCGCTTGGAGAGCTGGCTCTCCTGCCCAACAGAAA
CAGCAGGAACGGCGATTGTCCTCCTGCTCCAGCACAACGCAATTAAGTAG
CCTTAGCCAGAGTTCCTCGCTGACGCAGTGCAGCCACTTGTCCAGCTGTA
GTTCTCCTTTGGATGAGCATCACAACAGCTGCGATATATGCCAGGCCTAC
AGGCGCATGTTTCCTTCTTACTGAATAAATTAGCAAAATTATTTGTGTCT
TATGTTTTAAAAAAAAAAAAAAAAAAAA

IP09370.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:36:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG14079-RA 1194 CG14079-RA 141..1155 1..1015 5060 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 00:19:55
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 19087832..19088628 212..1008 3955 99.7 Plus
chr3L 24539361 chr3L 19087563..19087774 1..212 1060 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:57:59 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 00:19:54
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 19098268..19099071 212..1015 4005 99.9 Plus
3L 28110227 3L 19097999..19098210 1..212 1060 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:26:40
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 19091368..19092171 212..1015 4005 99.8 Plus
3L 28103327 3L 19091099..19091310 1..212 1060 100 Plus
Blast to na_te.dros performed on 2019-03-16 00:19:54 has no hits.

IP09370.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 00:20:42 Download gff for IP09370.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 19087563..19087774 1..212 100 -> Plus
chr3L 19087833..19088628 213..1008 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:39:24 Download gff for IP09370.complete
Subject Subject Range Query Range Percent Splice Strand
CG14079-RA 1..810 165..974 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:01:20 Download gff for IP09370.complete
Subject Subject Range Query Range Percent Splice Strand
CG14079-RA 1..810 165..974 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:49:18 Download gff for IP09370.complete
Subject Subject Range Query Range Percent Splice Strand
CG14079-RA 1..810 165..974 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:41:51 Download gff for IP09370.complete
Subject Subject Range Query Range Percent Splice Strand
CG14079-RA 1..810 165..974 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 02:02:59 Download gff for IP09370.complete
Subject Subject Range Query Range Percent Splice Strand
CG14079-RA 1..810 165..974 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:44:54 Download gff for IP09370.complete
Subject Subject Range Query Range Percent Splice Strand
CG14079-RA 1..810 165..974 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:01:19 Download gff for IP09370.complete
Subject Subject Range Query Range Percent Splice Strand
CG14079-RA 1..1008 1..1008 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:49:18 Download gff for IP09370.complete
Subject Subject Range Query Range Percent Splice Strand
CG14079-RA 1..1008 1..1008 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:41:51 Download gff for IP09370.complete
Subject Subject Range Query Range Percent Splice Strand
CG14079-RA 1..810 165..974 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:02:59 Download gff for IP09370.complete
Subject Subject Range Query Range Percent Splice Strand
CG14079-RA 1..1008 1..1008 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:20:42 Download gff for IP09370.complete
Subject Subject Range Query Range Percent Splice Strand
3L 19097999..19098210 1..212 100 -> Plus
3L 19098269..19099064 213..1008 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:20:42 Download gff for IP09370.complete
Subject Subject Range Query Range Percent Splice Strand
3L 19097999..19098210 1..212 100 -> Plus
3L 19098269..19099064 213..1008 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:20:42 Download gff for IP09370.complete
Subject Subject Range Query Range Percent Splice Strand
3L 19097999..19098210 1..212 100 -> Plus
3L 19098269..19099064 213..1008 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:49:18 Download gff for IP09370.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 19091099..19091310 1..212 100 -> Plus
arm_3L 19091369..19092164 213..1008 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:20:50 Download gff for IP09370.complete
Subject Subject Range Query Range Percent Splice Strand
3L 19091099..19091310 1..212 100 -> Plus
3L 19091369..19092164 213..1008 100   Plus

IP09370.hyp Sequence

Translation from 164 to 973

> IP09370.hyp
MSHKRFYVKLDLQLHALTCPGVWLCSHGYLEATIKTLGYYFRTGPMEPRF
PMLCHDQFTMEGYFKSVGCLEEMHELLKAEQLEITVWQNGRRLAYFVGSL
SDVMQPTFPRLSCAHSSNVQLLMKATPAFPGILAPKVELSAQLTTQDRKK
VCSCSSSREYSAPPVNRHVESRCLGHLDQPRKQQTVCHGRQSNCCPSGSY
AAWRAGSPAQQKQQERRLSSCSSTTQLSSLSQSSSLTQCSHLSSCSSPLD
EHHNSCDICQAYRRMFPSY*

IP09370.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:02:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG14079-PA 269 CG14079-PA 1..269 1..269 1454 100 Plus

IP09370.pep Sequence

Translation from 164 to 973

> IP09370.pep
MSHKRFYVKLDLQLHALTCPGVWLCSHGYLEATIKTLGYYFRTGPMEPRF
PMLCHDQFTMEGYFKSVGCLEEMHELLKAEQLEITVWQNGRRLAYFVGSL
SDVMQPTFPRLSCAHSSNVQLLMKATPAFPGILAPKVELSAQLTTQDRKK
VCSCSSSREYSAPPVNRHVESRCLGHLDQPRKQQTVCHGRQSNCCPSGSY
AAWRAGSPAQQKQQERRLSSCSSTTQLSSLSQSSSLTQCSHLSSCSSPLD
EHHNSCDICQAYRRMFPSY*

IP09370.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 14:58:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23660-PA 269 GF23660-PA 1..269 1..269 1083 80.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 14:58:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG16022-PA 269 GG16022-PA 1..269 1..269 1355 95.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 14:58:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH14612-PA 263 GH14612-PA 1..263 1..269 840 65 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:56:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG14079-PA 269 CG14079-PA 1..269 1..269 1454 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 14:58:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\Tes124-PA 279 GI13500-PA 1..278 1..268 851 60.8 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 14:58:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA12749-PA 277 GA12749-PA 1..274 1..266 1001 75.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 14:58:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM15011-PA 269 GM15011-PA 1..269 1..269 1411 97.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 14:58:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD14788-PA 269 GD14788-PA 1..269 1..269 1429 99.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 14:58:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ11861-PA 267 GJ11861-PA 1..264 1..266 813 64.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 14:58:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK10410-PA 286 GK10410-PA 1..284 1..266 898 65.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 14:58:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE23189-PA 269 GE23189-PA 1..269 1..269 1322 93.3 Plus
Dyak\GE19587-PA 269 GE19587-PA 1..269 1..269 1321 93.3 Plus