Clone IP09426 Report

Search the DGRC for IP09426

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:94
Well:26
Vector:pOT2
Associated Gene/TranscriptCG12395-RA
Protein status:IP09426.pep: gold
Preliminary Size:824
Sequenced Size:996

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG12395 2008-04-29 Release 5.5 accounting
CG12395 2008-08-15 Release 5.9 accounting
CG12395 2008-12-18 5.12 accounting

Clone Sequence Records

IP09426.complete Sequence

996 bp (996 high quality bases) assembled on 2006-04-12

GenBank Submission: BT025119

> IP09426.complete
TGTATACCCACACAACAATAAAGCCGAGACCATATTTACAAATTGATTTT
GCTATTGCATATCATATCATTATCACCAAGGATGCATATCGTGAGTGGCA
AGAATCTGAGCCGCGAAGAGTTAGAGGAAGTTAACAAATGGATGCAACAA
AATAGTATTAGCACTCAAAGATTGCGTCGCGAGTTTTCCGATGTTTTGCC
GCTGGCCGAAATATTCAAACGCGATTATCCGCGCTTGGTGGATCTCTTCA
ATTATCCGAAGAAGAGTAGTGTTCAGCTGAAGTTGGCCAATTGGGAGACA
TTCAACTTTAAAGTGTTATCCAAGTTAAATATGACGTTGACTAAAGATTT
TATGGAGCAAATGGCGAATGGTGTTAGTGGTGCCGCCGAAGTCATGTTGC
ATGAAGTGATACGATTGGAGAAACGACAACGCCTTGCAGAACAACGAAAT
GCGGCATTGCGGCAGGAACAACTTTGGGAGGAAAATGATGAGATAAAAAC
TGTTGTGGTTAACAAACAGATCGGCGATGGCATAGTTCAGGTGCCGCAGA
AAATGATCCTATATTCGCTGTACGAGAAAGTGGAACGTGATAGTCATGCA
AAAGATGTTATTATCGATGCCTATCAACAGCGATTGACCCACATGGAGAG
TATTATTAAATTGAAAACGGAACGGATCGACGAACTTCTAATGCAGATGG
GTAAACAACCTCAAAAGAGAGCTACTAGCAACGCAACCAATTGTTTCTTT
GCTTACGATGGAAAGAACTCCCTAATTCAGAAGCATATAAGTCCTACGCA
AGCATCATCGCCTACCCATCTGGATGCGGACGGCTTTAACATCTAATGGC
AATCTCGGAATTAGTATTAAAAAGTTAATTATTGTTAGATTGTGAATCTA
AATTACCGATTATCGGTTAAATAGATTACGATATAGACACAGTCTTGGCA
ATTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

IP09426.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:29:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG12395-RA 954 CG12395-RA 1..954 1..954 4770 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 11:54:44
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 15951718..15952671 954..1 4695 99.5 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:58:11 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 11:54:42
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 16061900..16062855 956..1 4780 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:20:17
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 16069998..16070953 956..1 4780 100 Minus
Blast to na_te.dros performed on 2019-03-15 11:54:43 has no hits.

IP09426.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 11:55:28 Download gff for IP09426.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 15951718..15952671 1..954 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:39:43 Download gff for IP09426.complete
Subject Subject Range Query Range Percent Splice Strand
CG12395-RA 1..765 82..846 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:51:40 Download gff for IP09426.complete
Subject Subject Range Query Range Percent Splice Strand
CG12395-RA 1..765 82..846 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:34:33 Download gff for IP09426.complete
Subject Subject Range Query Range Percent Splice Strand
CG12395-RA 1..765 82..846 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:32:20 Download gff for IP09426.complete
Subject Subject Range Query Range Percent Splice Strand
CG12395-RA 1..765 82..846 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:45:37 Download gff for IP09426.complete
Subject Subject Range Query Range Percent Splice Strand
CG12395-RA 1..765 82..846 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:25:43 Download gff for IP09426.complete
Subject Subject Range Query Range Percent Splice Strand
CG12395-RA 1..824 23..846 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:51:40 Download gff for IP09426.complete
Subject Subject Range Query Range Percent Splice Strand
CG12395-RA 1..954 1..954 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:34:33 Download gff for IP09426.complete
Subject Subject Range Query Range Percent Splice Strand
CG12395-RA 1..954 1..954 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:32:20 Download gff for IP09426.complete
Subject Subject Range Query Range Percent Splice Strand
CG12395-RA 1..824 23..846 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:45:37 Download gff for IP09426.complete
Subject Subject Range Query Range Percent Splice Strand
CG12395-RA 44..997 1..954 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:55:28 Download gff for IP09426.complete
Subject Subject Range Query Range Percent Splice Strand
X 16061902..16062855 1..954 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:55:28 Download gff for IP09426.complete
Subject Subject Range Query Range Percent Splice Strand
X 16061902..16062855 1..954 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:55:28 Download gff for IP09426.complete
Subject Subject Range Query Range Percent Splice Strand
X 16061902..16062855 1..954 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:34:33 Download gff for IP09426.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 15955935..15956888 1..954 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:10:53 Download gff for IP09426.complete
Subject Subject Range Query Range Percent Splice Strand
X 16070000..16070953 1..954 100   Minus

IP09426.pep Sequence

Translation from 81 to 845

> IP09426.pep
MHIVSGKNLSREELEEVNKWMQQNSISTQRLRREFSDVLPLAEIFKRDYP
RLVDLFNYPKKSSVQLKLANWETFNFKVLSKLNMTLTKDFMEQMANGVSG
AAEVMLHEVIRLEKRQRLAEQRNAALRQEQLWEENDEIKTVVVNKQIGDG
IVQVPQKMILYSLYEKVERDSHAKDVIIDAYQQRLTHMESIIKLKTERID
ELLMQMGKQPQKRATSNATNCFFAYDGKNSLIQKHISPTQASSPTHLDAD
GFNI*

IP09426.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 14:03:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF20696-PA 231 GF20696-PA 1..223 1..224 962 78.6 Plus
Dana\GF25154-PA 288 GF25154-PA 8..248 7..208 329 37.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 14:03:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG19349-PA 252 GG19349-PA 1..249 1..249 1196 87.6 Plus
Dere\GG15400-PA 254 GG15400-PA 4..248 12..219 319 34.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 14:03:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH24770-PA 252 GH24770-PA 1..232 1..232 790 61.6 Plus
Dgri\GH24769-PA 204 GH24769-PA 12..138 8..137 272 40.8 Plus
Dgri\GH16317-PA 212 GH16317-PA 4..114 6..114 160 32.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:11:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG12395-PA 254 CG12395-PA 1..254 1..254 1292 100 Plus
CG16719-PA 271 CG16719-PA 1..233 9..208 338 36.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 14:03:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI21719-PA 254 GI21719-PA 1..253 1..243 829 61.4 Plus
Dmoj\GI21718-PA 384 GI21718-PA 19..154 8..148 266 41.1 Plus
Dmoj\GI24799-PA 231 GI24799-PA 6..210 7..203 211 30.6 Plus
Dmoj\GI13262-PA 284 GI13262-PA 7..113 9..114 152 32.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 14:03:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL13136-PA 243 GL13136-PA 1..228 1..228 854 67.5 Plus
Dper\GL12715-PA 312 GL12715-PA 5..110 7..110 203 42.5 Plus
Dper\GL17959-PA 148 GL17959-PA 3..106 5..107 194 42.3 Plus
Dper\GL20330-PA 115 GL20330-PA 5..109 7..110 190 40.6 Plus
Dper\GL14829-PA 132 GL14829-PA 15..109 17..110 185 34.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 14:03:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA22962-PA 243 GA22962-PA 1..228 1..228 854 67.5 Plus
Dpse\GA14103-PA 317 GA14103-PA 5..110 7..110 203 42.5 Plus
Dpse\GA28350-PA 157 GA28350-PA 3..108 5..109 192 41.5 Plus
Dpse\GA28865-PA 115 GA28865-PA 5..109 7..110 190 40.6 Plus
Dpse\GA26261-PA 132 GA26261-PA 15..109 17..110 187 34.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 14:03:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM12982-PA 254 GM12982-PA 1..253 1..253 1268 92.5 Plus
Dsec\GM25176-PA 271 GM25176-PA 4..233 12..208 318 37.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 14:03:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD15765-PA 254 GD15765-PA 1..253 1..253 1279 92.9 Plus
Dsim\GD14206-PA 211 GD14206-PA 1..173 68..208 183 33.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 14:03:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ15586-PA 254 GJ15586-PA 1..253 1..243 853 62.6 Plus
Dvir\GJ15585-PA 336 GJ15585-PA 8..136 4..138 279 41.5 Plus
Dvir\GJ12032-PA 259 GJ12032-PA 1..227 3..203 225 28.6 Plus
Dvir\GJ19072-PA 225 GJ19072-PA 5..217 7..207 223 27.8 Plus
Dvir\GJ15326-PA 267 GJ15326-PA 7..205 9..203 212 32.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 14:03:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20112-PA 247 GK20112-PA 1..231 1..229 882 68 Plus
Dwil\GK15552-PA 279 GK15552-PA 7..234 9..208 298 32.9 Plus
Dwil\GK20111-PA 348 GK20111-PA 9..134 8..140 267 39.1 Plus
Dwil\GK20109-PA 130 GK20109-PA 16..118 8..110 243 44.7 Plus
Dwil\GK20110-PA 121 GK20110-PA 9..111 8..110 236 41.7 Plus
Dwil\GK20111-PA 348 GK20111-PA 229..297 134..202 165 47.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 14:03:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE15995-PA 252 GE15995-PA 1..249 1..249 1241 91.6 Plus
Dyak\GE20866-PA 274 GE20866-PA 4..233 12..208 295 34.3 Plus

IP09426.hyp Sequence

Translation from 81 to 845

> IP09426.hyp
MHIVSGKNLSREELEEVNKWMQQNSISTQRLRREFSDVLPLAEIFKRDYP
RLVDLFNYPKKSSVQLKLANWETFNFKVLSKLNMTLTKDFMEQMANGVSG
AAEVMLHEVIRLEKRQRLAEQRNAALRQEQLWEENDEIKTVVVNKQIGDG
IVQVPQKMILYSLYEKVERDSHAKDVIIDAYQQRLTHMESIIKLKTERID
ELLMQMGKQPQKRATSNATNCFFAYDGKNSLIQKHISPTQASSPTHLDAD
GFNI*

IP09426.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:03:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG12395-PA 254 CG12395-PA 1..254 1..254 1292 100 Plus
CG16719-PA 271 CG16719-PA 1..233 9..208 338 36.5 Plus