Clone IP09427 Report

Search the DGRC for IP09427

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:94
Well:27
Vector:pOT2
Associated Gene/TranscriptCG12448-RC
Protein status:IP09427.pep: gold
Preliminary Size:1182
Sequenced Size:1310

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG12448 2008-04-29 Release 5.5 accounting
CG12448 2008-08-15 Release 5.9 accounting
CG12448 2008-12-18 5.12 accounting

Clone Sequence Records

IP09427.complete Sequence

1310 bp assembled on 2007-04-18

GenBank Submission: BT030446

> IP09427.complete
CTACATATACAGCATTACAGCAATACATTTATACACATAAACATACGCAA
GAATACGGCTTGACCATGTTCCTACAATGTCCTTCGGTGATGCGAGGTTC
TAAACACTTTTCTCAGCACATGAGCGATTTCAGTTCTGGAAGCCATCAGA
ACACGGACAATTTCAGCGATTGTTGGTTGGAATCCAATAGTAGTCAGGAT
TCGTATTTCGGTCAATCTAGTCGACTGAAACTTGCCCTCCTGGATTACAA
ACAGTTCAACGCTGCAAGGACTATTCAGTGTCATGTGAGGGGATTTTTGG
CCAGAAGTACTCTTAAAAGGCAGATCGATGCTGCCACCATCATTAGCAAG
TGGTGGCGTGGTTTCTGGGTGCGACACTCAAAGTTCTCCTTTATGCAACA
GCTGTTACAGCAGAGGATCATCCAGTATCACCACGATATGGCCACTAAGA
TTCAGGCGCTGTTCCGCGGATGGATGACTCGCCAGTACTTCCAGGACTTC
CAGGGCATGAAGTCGCTCCGAATACAGTATGTGGAAGATATGCTCAGTTC
GCTTTACAGAAAGGTCCACAGAATGCGAAAGGAACATATGCTACCAGGAA
TTTATGCATTAAGGGAATCTGATCTGCTAAGTAAGATCGAGGACCTTTCT
AGTACCTTTGGCTACCGCTTTCATAACGGCCGTGTGCGGGCAGCCATTGC
AATGAAGCGATCCTTCATAAACGACCGGCGACATGAGTTCCGAAAGGGAA
ATACTTATTCCAAAGTGCCTTATCCGGGACCCTATATAGAAAACATTAAC
GACTTAGAATTTACCTTGCCAAAGCGAATGACACCACGTTTGCAGCGTAC
GATTCTGGTATATGACAAGGCAATGAGAGATAAGAATGTGGAGAAGGTGT
ACATGAACTATTCAACCAAACGTCGTATGAGCATGCATGTCATGCGAGAG
AATATGCGAAATCGTTTTTGCAAAGATTTTGTAAAGCGTTTGGCAAAAAG
GAACAAGACACGAAACGCACAGGATCGTAACATTAAATACTATCTTGATG
ATCTTCTAACGACCGCTGATGAATATAATTGTTTTTGCAAGCCCCAAGTA
AAAGACGATAGCTTGTGCCAATAGGTTGTCTCAGTAATTAACTTTCCATA
AGACACCGAGAGCTGGGAAAATCTATTTTCACATTCGATCTGTTTTTTAT
TATGGGCTCTTCAAATTGTGAACCTGTATTGAAAATAGTTTATGCATTAG
CATGCAAAATAAATTTAAGTTACCTACGAGTATGAACAACTTTAAAAAAA
AAAAAAAAAA

IP09427.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:05:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG12448-RC 1463 CG12448-RC 131..1427 1..1297 6485 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 18:16:18
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 15940240..15940861 1..622 3110 100 Plus
chr2L 23010047 chr2L 15941279..15941653 919..1293 1875 100 Plus
chr2L 23010047 chr2L 15940924..15941219 623..918 1480 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:58:13 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 18:16:16
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 15941441..15942062 1..622 3110 100 Plus
2L 23513712 2L 15942480..15942858 919..1297 1895 100 Plus
2L 23513712 2L 15942125..15942420 623..918 1480 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:00:35
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 15941441..15942062 1..622 3110 100 Plus
2L 23513712 2L 15942480..15942858 919..1297 1895 100 Plus
2L 23513712 2L 15942125..15942420 623..918 1480 100 Plus
Blast to na_te.dros performed on 2019-03-15 18:16:16 has no hits.

IP09427.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 18:17:07 Download gff for IP09427.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 15940240..15940861 1..622 100 -> Plus
chr2L 15940924..15941219 623..918 100 -> Plus
chr2L 15941279..15941653 919..1293 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:39:45 Download gff for IP09427.complete
Subject Subject Range Query Range Percent Splice Strand
CG12448-RB 1..1032 66..1097 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:06:26 Download gff for IP09427.complete
Subject Subject Range Query Range Percent Splice Strand
CG12448-RC 1..1059 66..1124 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:59:01 Download gff for IP09427.complete
Subject Subject Range Query Range Percent Splice Strand
CG12448-RC 1..1059 66..1124 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 15:15:12 Download gff for IP09427.complete
Subject Subject Range Query Range Percent Splice Strand
CG12448-RB 1..1032 66..1097 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:58:18 Download gff for IP09427.complete
Subject Subject Range Query Range Percent Splice Strand
CG12448-RC 1..1059 66..1124 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:34:30 Download gff for IP09427.complete
Subject Subject Range Query Range Percent Splice Strand
CG12448-RB 1..1032 66..1097 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:06:25 Download gff for IP09427.complete
Subject Subject Range Query Range Percent Splice Strand
CG12448-RC 1..1293 1..1293 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:59:01 Download gff for IP09427.complete
Subject Subject Range Query Range Percent Splice Strand
CG12448-RC 1..1293 1..1293 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 15:15:12 Download gff for IP09427.complete
Subject Subject Range Query Range Percent Splice Strand
CG12448-RB 1..1032 66..1097 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:58:18 Download gff for IP09427.complete
Subject Subject Range Query Range Percent Splice Strand
CG12448-RC 1..1293 1..1293 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:17:07 Download gff for IP09427.complete
Subject Subject Range Query Range Percent Splice Strand
2L 15941441..15942062 1..622 100 -> Plus
2L 15942125..15942420 623..918 100 -> Plus
2L 15942480..15942854 919..1293 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:17:07 Download gff for IP09427.complete
Subject Subject Range Query Range Percent Splice Strand
2L 15941441..15942062 1..622 100 -> Plus
2L 15942125..15942420 623..918 100 -> Plus
2L 15942480..15942854 919..1293 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:17:07 Download gff for IP09427.complete
Subject Subject Range Query Range Percent Splice Strand
2L 15941441..15942062 1..622 100 -> Plus
2L 15942125..15942420 623..918 100 -> Plus
2L 15942480..15942854 919..1293 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:59:01 Download gff for IP09427.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 15941441..15942062 1..622 100 -> Plus
arm_2L 15942125..15942420 623..918 100 -> Plus
arm_2L 15942480..15942854 919..1293 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:39:51 Download gff for IP09427.complete
Subject Subject Range Query Range Percent Splice Strand
2L 15941441..15942062 1..622 100 -> Plus
2L 15942125..15942420 623..918 100 -> Plus
2L 15942480..15942854 919..1293 100   Plus

IP09427.hyp Sequence

Translation from 2 to 1123

> IP09427.hyp
TYTALQQYIYTHKHTQEYGLTMFLQCPSVMRGSKHFSQHMSDFSSGSHQN
TDNFSDCWLESNSSQDSYFGQSSRLKLALLDYKQFNAARTIQCHVRGFLA
RSTLKRQIDAATIISKWWRGFWVRHSKFSFMQQLLQQRIIQYHHDMATKI
QALFRGWMTRQYFQDFQGMKSLRIQYVEDMLSSLYRKVHRMRKEHMLPGI
YALRESDLLSKIEDLSSTFGYRFHNGRVRAAIAMKRSFINDRRHEFRKGN
TYSKVPYPGPYIENINDLEFTLPKRMTPRLQRTILVYDKAMRDKNVEKVY
MNYSTKRRMSMHVMRENMRNRFCKDFVKRLAKRNKTRNAQDRNIKYYLDD
LLTTADEYNCFCKPQVKDDSLCQ*

IP09427.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:03:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG12448-PC 352 CG12448-PC 1..352 22..373 1873 100 Plus
CG13544-PA 367 CG13544-PA 34..366 61..372 428 30.4 Plus
CG18063-PD 371 CG18063-PD 44..306 73..330 374 31.2 Plus
CG18063-PE 372 CG18063-PE 45..307 73..330 374 31.2 Plus
CG18063-PC 372 CG18063-PC 45..307 73..330 374 31.2 Plus

IP09427.pep Sequence

Translation from 2 to 1123

> IP09427.pep
TYTALQQYIYTHKHTQEYGLTMFLQCPSVMRGSKHFSQHMSDFSSGSHQN
TDNFSDCWLESNSSQDSYFGQSSRLKLALLDYKQFNAARTIQCHVRGFLA
RSTLKRQIDAATIISKWWRGFWVRHSKFSFMQQLLQQRIIQYHHDMATKI
QALFRGWMTRQYFQDFQGMKSLRIQYVEDMLSSLYRKVHRMRKEHMLPGI
YALRESDLLSKIEDLSSTFGYRFHNGRVRAAIAMKRSFINDRRHEFRKGN
TYSKVPYPGPYIENINDLEFTLPKRMTPRLQRTILVYDKAMRDKNVEKVY
MNYSTKRRMSMHVMRENMRNRFCKDFVKRLAKRNKTRNAQDRNIKYYLDD
LLTTADEYNCFCKPQVKDDSLCQ*

IP09427.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 08:18:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF14929-PA 578 GF14929-PA 26..308 49..325 723 49.5 Plus
Dana\GF13314-PA 366 GF13314-PA 20..365 50..372 379 28.9 Plus
Dana\GF14926-PA 315 GF14926-PA 4..310 87..371 359 26.1 Plus
Dana\GF14929-PA 578 GF14929-PA 322..509 73..259 339 37.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 08:18:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG25181-PA 391 GG25181-PA 1..346 22..365 1497 83.5 Plus
Dere\GG20062-PA 367 GG20062-PA 46..366 73..372 419 31 Plus
Dere\GG25178-PA 352 GG25178-PA 24..298 67..332 385 32.7 Plus
Dere\GG25182-PA 307 GG25182-PA 46..246 73..277 332 33.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 08:18:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH23059-PA 329 GH23059-PA 6..277 62..327 379 33.3 Plus
Dgri\GH10387-PA 350 GH10387-PA 17..349 56..372 376 30.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:20:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG12448-PC 352 CG12448-PC 1..352 22..373 1873 100 Plus
CG13544-PA 367 CG13544-PA 34..366 61..372 428 30.4 Plus
CG18063-PD 371 CG18063-PD 44..306 73..330 374 31.2 Plus
CG18063-PE 372 CG18063-PE 45..307 73..330 374 31.2 Plus
CG18063-PC 372 CG18063-PC 45..307 73..330 374 31.2 Plus
CG31735-PC 312 CG31735-PC 2..258 85..332 355 29.6 Plus
CG31735-PA 312 CG31735-PA 2..258 85..332 355 29.6 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 08:18:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI21130-PA 355 GI21130-PA 40..355 77..373 461 34.4 Plus
Dmoj\GI12944-PA 310 GI12944-PA 1..302 80..362 373 29.7 Plus
Dmoj\GI17366-PA 304 GI17366-PA 62..245 76..259 314 36.4 Plus
Dmoj\GI17367-PA 209 GI17367-PA 1..156 104..259 208 30.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 08:18:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL15302-PA 357 GL15302-PA 55..356 79..372 613 41.3 Plus
Dper\GL11293-PA 587 GL11293-PA 245..587 52..373 520 34.9 Plus
Dper\GL15300-PA 351 GL15300-PA 24..342 73..372 400 31.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 08:18:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA11642-PA 357 GA11642-PA 30..356 60..372 615 40 Plus
Dpse\GA12353-PA 543 GA12353-PA 201..542 52..372 522 35 Plus
Dpse\GA29041-PA 635 GA29041-PA 308..626 73..372 394 31.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 08:18:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18642-PA 375 GM18642-PA 1..326 40..365 1708 96.9 Plus
Dsec\GM15577-PA 359 GM15577-PA 46..358 73..372 360 30 Plus
Dsec\GM18643-PA 208 GM18643-PA 44..197 73..225 308 37.7 Plus
Dsec\GM18639-PA 353 GM18639-PA 46..299 79..332 273 27.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 08:18:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD24029-PA 393 GD24029-PA 1..344 22..365 1800 96.5 Plus
Dsim\GD25077-PA 367 GD25077-PA 32..366 59..372 419 30 Plus
Dsim\GD24030-PA 371 GD24030-PA 44..306 73..330 370 31 Plus
Dsim\GD24026-PA 352 GD24026-PA 36..298 79..332 367 31.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 08:18:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ18189-PA 334 GJ18189-PA 18..327 77..368 420 34.3 Plus
Dvir\GJ20979-PA 263 GJ20979-PA 3..263 130..373 338 30.5 Plus
Dvir\GJ18044-PA 246 GJ18044-PA 7..137 110..243 164 28.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 08:18:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK19591-PA 368 GK19591-PA 34..367 60..372 463 32.2 Plus
Dwil\GK24765-PA 346 GK24765-PA 15..345 60..372 397 31.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 08:18:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21222-PA 392 GE21222-PA 1..346 22..365 1556 86.7 Plus
Dyak\GE11599-PA 362 GE11599-PA 41..361 73..372 430 31.9 Plus
Dyak\GE21188-PA 350 GE21188-PA 9..298 55..332 351 30.4 Plus
Dyak\GE21233-PA 391 GE21233-PA 46..233 73..259 323 34.6 Plus