Clone IP09436 Report

Search the DGRC for IP09436

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:94
Well:36
Vector:pOT2
Associated Gene/TranscriptCG12674-RA
Protein status:IP09436.pep: gold
Preliminary Size:945
Sequenced Size:1159

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG12674 2008-04-29 Release 5.5 accounting
CG12674 2008-08-15 Release 5.9 accounting
CG12674 2008-12-18 5.12 accounting

Clone Sequence Records

IP09436.complete Sequence

1159 bp (1159 high quality bases) assembled on 2005-06-08

GenBank Submission: BT023581

> IP09436.complete
TCGAGCATTTGGAACGTGAAAGCAGGCAGAGCAGGGAAGTGCACGAAGAG
CCAAGAAAAAATCAGAAAACTCCTCCATTATGGCATCTGGGTTCGTGAAC
AATAAGCGCAAGCGGGATGAAGCGCACAATCAGTTCATCTGTCCCATTGT
CTACACAAATGAGTTGCCCACTTATCCAAAGGATTGCAAGTTTCTGCCCT
GTGGCCAGAATATCCAGGAGTACTGCAAGGAGCCGGTTTCGATTCCCAAA
CTGGACACTTGTTTTTCGCTAAATTTCAAAGGACTTCATGAGCTATTCTC
CGTTAATTTGATGGATCAGTCGGCTTACGATAAGCTTTCCGAGAATGTGC
AGCCAATGAATCCCAGAGAAGCTGATCTACTTAAGGACATAAGAGCCCTA
GACTGGGACTTCGCCAGACTCGAACCAAGTCGCGCTCAGGAATGCGCCAA
GATGTTCGCCAAGGAGCGAGTGCATCCACCTCTCCCAGGACTACAGCGTT
CTGTGGCGGTGCCCAAGGCCCCAAAAGACCTGCAGCCGGTCAGCCTGGAG
CAACAAAAGGCGATGATTGATGCGAGCTTCAAGGATATTGGCAAACCCCT
CTACCGACATCCCACCAATCCGGGTAGCAATGCCTACCCTGTGCAGGTCT
TGCCAGTCTTTCCCGATACGGATTTGCAGAAATATAGCTTCGTCCAGATG
AGTTTTGATAATCCACCCCAAAATAGCAACCAGGGACTAATCAGGGACTG
CGGAAGCTGTCTGATCAACTTCAGTTTCGTCCAGGACATTGCGGACTCTA
CCGAAAAGGTTTACGTATCCGACCATCGCTACAGAGAGGAAAAAGCCGAC
GATAGCTTGGAGCGCGGTGAGGGTTACATACTCCGCGAGGAGAATGACGC
CATCTTTTACGTTGGTGTCGACAAATACATCAAATTAAGGCGGGAACGTC
CACGCCCACACGTTTCGGCTAACAAGTTTCTGCTGAAGGTCCAGCGTGTG
GGAATGAATACAACTACCGATTAAAGAACAATATAAGAACATTTAATTGG
ATGTACTTCAGAAGCTTATGTTATGAAAATAAAAATATCAAAATGCTTGG
TGGAAATTTTCCATCTGATGACCATTAAAATAATAAAAACAAAAAAAAAA
AAAAAAAAA

IP09436.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:36:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG12674-RA 1336 CG12674-RA 182..1324 1..1143 5715 100 Plus
CG12674.c 2055 CG12674.c 182..1324 1..1143 5715 100 Plus
CG12674.b 2052 CG12674.b 182..1321 1..1143 5645 99.7 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 15:23:30
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 2079937..2080795 127..985 4265 99.8 Plus
chr2L 23010047 chr2L 2080860..2081015 985..1140 780 100 Plus
chr2L 23010047 chr2L 2079726..2079851 1..126 630 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:58:16 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 15:23:28
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2080208..2081066 127..985 4295 100 Plus
2L 23513712 2L 2081131..2081289 985..1143 795 100 Plus
2L 23513712 2L 2079998..2080123 1..126 630 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:26:35
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2080208..2081066 127..985 4295 100 Plus
2L 23513712 2L 2081131..2081289 985..1143 795 100 Plus
2L 23513712 2L 2079998..2080123 1..126 630 100 Plus
Blast to na_te.dros performed on 2019-03-15 15:23:28 has no hits.

IP09436.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 15:24:30 Download gff for IP09436.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 2079726..2079851 1..126 100 -> Plus
chr2L 2079937..2080795 127..985 99 -> Plus
chr2L 2080861..2081015 986..1140 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:39:50 Download gff for IP09436.complete
Subject Subject Range Query Range Percent Splice Strand
CG12674-RA 1..945 80..1024 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:01:11 Download gff for IP09436.complete
Subject Subject Range Query Range Percent Splice Strand
CG12674-RA 1..945 80..1024 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 01:26:54 Download gff for IP09436.complete
Subject Subject Range Query Range Percent Splice Strand
CG12674-RA 1..945 80..1024 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:41:44 Download gff for IP09436.complete
Subject Subject Range Query Range Percent Splice Strand
CG12674-RA 1..945 80..1024 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:04:45 Download gff for IP09436.complete
Subject Subject Range Query Range Percent Splice Strand
CG12674-RA 1..945 80..1024 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:44:43 Download gff for IP09436.complete
Subject Subject Range Query Range Percent Splice Strand
CG12674-RA 22..1161 1..1140 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:01:10 Download gff for IP09436.complete
Subject Subject Range Query Range Percent Splice Strand
CG12674-RA 22..1161 1..1140 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:26:54 Download gff for IP09436.complete
Subject Subject Range Query Range Percent Splice Strand
CG12674-RA 80..1219 1..1140 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:41:44 Download gff for IP09436.complete
Subject Subject Range Query Range Percent Splice Strand
CG12674-RA 22..1161 1..1140 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:04:45 Download gff for IP09436.complete
Subject Subject Range Query Range Percent Splice Strand
CG12674-RA 80..1219 1..1140 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:24:30 Download gff for IP09436.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2081132..2081286 986..1140 100   Plus
2L 2080208..2081066 127..985 100 -> Plus
2L 2079998..2080123 1..126 100 -> Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:24:30 Download gff for IP09436.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2081132..2081286 986..1140 100   Plus
2L 2080208..2081066 127..985 100 -> Plus
2L 2079998..2080123 1..126 100 -> Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:24:30 Download gff for IP09436.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2081132..2081286 986..1140 100   Plus
2L 2080208..2081066 127..985 100 -> Plus
2L 2079998..2080123 1..126 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:26:54 Download gff for IP09436.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 2081132..2081286 986..1140 100   Plus
arm_2L 2079998..2080123 1..126 100 -> Plus
arm_2L 2080208..2081066 127..985 100 -> Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:20:41 Download gff for IP09436.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2080208..2081066 127..985 100 -> Plus
2L 2081132..2081286 986..1140 100   Plus
2L 2079998..2080123 1..126 100 -> Plus

IP09436.hyp Sequence

Translation from 79 to 1023

> IP09436.hyp
MASGFVNNKRKRDEAHNQFICPIVYTNELPTYPKDCKFLPCGQNIQEYCK
EPVSIPKLDTCFSLNFKGLHELFSVNLMDQSAYDKLSENVQPMNPREADL
LKDIRALDWDFARLEPSRAQECAKMFAKERVHPPLPGLQRSVAVPKAPKD
LQPVSLEQQKAMIDASFKDIGKPLYRHPTNPGSNAYPVQVLPVFPDTDLQ
KYSFVQMSFDNPPQNSNQGLIRDCGSCLINFSFVQDIADSTEKVYVSDHR
YREEKADDSLERGEGYILREENDAIFYVGVDKYIKLRRERPRPHVSANKF
LLKVQRVGMNTTTD*

IP09436.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:03:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG12674-PA 314 CG12674-PA 1..314 1..314 1672 100 Plus
CG12674-PB 313 CG12674-PB 1..313 1..314 1655 99.7 Plus

IP09436.pep Sequence

Translation from 79 to 1023

> IP09436.pep
MASGFVNNKRKRDEAHNQFICPIVYTNELPTYPKDCKFLPCGQNIQEYCK
EPVSIPKLDTCFSLNFKGLHELFSVNLMDQSAYDKLSENVQPMNPREADL
LKDIRALDWDFARLEPSRAQECAKMFAKERVHPPLPGLQRSVAVPKAPKD
LQPVSLEQQKAMIDASFKDIGKPLYRHPTNPGSNAYPVQVLPVFPDTDLQ
KYSFVQMSFDNPPQNSNQGLIRDCGSCLINFSFVQDIADSTEKVYVSDHR
YREEKADDSLERGEGYILREENDAIFYVGVDKYIKLRRERPRPHVSANKF
LLKVQRVGMNTTTD*

IP09436.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 14:57:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF14600-PA 947 GF14600-PA 1..314 1..305 804 50 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 14:57:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24828-PA 312 GG24828-PA 1..312 1..312 1114 68.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 14:57:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH25215-PA 306 GH25215-PA 86..251 19..215 208 32 Plus
Dgri\GH10872-PA 309 GH10872-PA 86..251 19..215 206 32 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:55:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG12674-PA 314 CG12674-PA 1..314 1..314 1672 100 Plus
CG12674-PB 313 CG12674-PB 1..313 1..314 1655 99.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 14:57:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI17275-PA 326 GI17275-PA 8..318 7..306 446 35.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 14:57:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM16852-PA 310 GM16852-PA 1..310 1..310 1419 85.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 14:57:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD23131-PA 310 GD23131-PA 1..310 1..310 1424 85.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 14:57:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ17433-PA 355 GJ17433-PA 1..323 1..306 654 43.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 14:57:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK15046-PA 331 GK15046-PA 5..313 10..307 699 48.7 Plus
Dwil\GK23723-PA 115 GK23723-PA 20..108 19..107 185 41.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 14:57:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE17932-PA 311 GE17932-PA 1..310 1..311 1103 69 Plus