Clone IP09451 Report

Search the DGRC for IP09451

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:94
Well:51
Vector:pOT2
Associated Gene/TranscriptCG13288-RB
Protein status:IP09451.pep: gold
Preliminary Size:822
Sequenced Size:1703

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG13288 2008-04-29 Release 5.5 accounting
CG13288 2008-08-15 Release 5.9 accounting
CG13288 2008-12-18 5.12 accounting

Clone Sequence Records

IP09451.complete Sequence

1703 bp (1703 high quality bases) assembled on 2005-06-08

GenBank Submission: BT023580

> IP09451.complete
CGACGGTTCTCCTCGGAATATCGCGTCCTGGCATTTTGGCAACCCACACT
GCGGTCCGCGTAACTATGCCCGGTCATGCCACATAAATCAGTGTCATAAA
TCTGCGCGTCTTGTGTATGAAATTATGTGGCAGTGTCCCGCAAACAGCAA
AGAGAAATTCTAGATATTTATCTGTCGAGTGCCGAATAAAAACTTGTCTA
AAGAAAAACAAGTAAAGCAAGCAAATTAACCGTTTGGCGGGAAACGAAAT
AAAATGGTATCCCAGCGGGTAAAAGTGAAGAAAGTCAAGTGAAAGTGGCG
GCTGCCGTTCCCTAAGCGCAGAAAACAACGTAAAATAAAATCCTTCTTGT
GTCAGCGTGCTTGGAATGCTCATCCGCGAGGAGGCGTGAGCTACTAAAAG
ATGGCCATCCTGGAGTCTTGTTGCTTTTGGAAGGATGTGCGGAGTGGCAG
CTTTGCCTGCGCCATCTACACGTTGGTTTACTTTGGCTTCTCGACGCTGA
TGTTTTTGTTCTACCTAATCGAGGAACAGGACTTTCTGCTGGGTAACCGT
GCTCAGCCGCTGGGTGAAAGTTTGCTGGAGAAGGGCGATGTGACTGTAGT
GACTGTGATATTCAACATTTTGTTGCTCTTTTGCTCCATACTGATGGTGC
TATCGTCGGTTCTGCTCATATTGGGCCTCCAGCAGAACAAGAGACATCTG
CTGATACCCTGGATTAGTTTCATGCTGGGCGATCTGCTCATCGAGGTCTG
CCACTTGGTCCACTTGGCCCTATCCCGCCGCGTCAAGTTCGATCCGATTG
TCGGTTTCATCTTTACCATGGATTTCTTCCTACTGTGCCTCAATCTTTAC
TGTCTGCTGTGCGTCATCTCGCAGTACCAGACGTTCCGTTCCCAGCGGGC
GGAGATGCGACTGGCGGCCTCGACGGCATCGCCTATTGTGGTCTTCACAG
CAGCGGAGAAGCTAACCAAAGCACAGCAACAGCAACTGCACAATAATCTG
TTGCAGCAGCTGGAGACCGGAAGCGGATATGGCAAGCGGCGACGTATGCT
CGGAGCAGCCAGCCCGCTAATAACTTCGCAGCGGCCTACCAACTTCTCCA
CCATCACCGAGGAGGAGGAGCAGCAGTCCCGAACAGCACTGCCAGGAATA
TAAGAAGTGAAAAAGTTCCAAGAACTACCAAAACTTTGTGACTACAAGAA
ACACAAAAGTTTGCCGAAACTATTTGTGTAACTTTCTCTCGCCAAAACTT
GAAGGACCGCAAAAATGTGGTTTATGACGCCAGAAGAGCGCATGAAATTC
TTGGCGGTCAGCTCCACTGCCAAAAAGCTTTAAATTTAACCAATTATTTT
GTACGTTACCCCCAACAATGAACTATCAATATGAAGGACTTTTGATAAGA
ATGTAATCAGCAGTGCTCAAATACCCTTCAAAGTTTTATTCAATAATTAC
AGTGAGAGGAAGCGGGGAAACATGAAAAAAAAATCCATCAATCAATCAAC
ACACAGCTGCTGTGAACGAAACCTTTTCAACTCCCAACGGAAATTCACGG
TGAAATACATCAAATTTGTTTGTCAACAGCAAACACCACCGACCGAACTT
TCCTGTAAATCTATTATGCAAAATATAGAAATTCTTTTAATATCTAGAAA
TATTCATATAAAATTCCTGGAAAGCAAGCTGAACCAAAAAAAAAAAAAAA
AAA

IP09451.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:36:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG13288-RB 1708 CG13288-RB 14..1708 1..1695 8475 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 17:21:26
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 5899971..5900447 1..477 2340 99.4 Plus
chr3L 24539361 chr3L 5909677..5910111 1251..1685 2130 99.3 Plus
chr3L 24539361 chr3L 5901957..5902162 931..1136 1015 99.5 Plus
chr3L 24539361 chr3L 5901535..5901696 683..844 750 97.5 Plus
chr3L 24539361 chr3L 5909484..5909602 1133..1251 595 100 Plus
chr3L 24539361 chr3L 5901149..5901273 475..599 580 97.6 Plus
chr3L 24539361 chr3L 5901378..5901465 598..685 440 100 Plus
chr3L 24539361 chr3L 5901776..5901862 845..931 405 97.7 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:58:21 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 17:21:24
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 5907405..5907881 1..477 2385 100 Plus
3L 28110227 3L 5917106..5917550 1251..1695 2225 100 Plus
3L 28110227 3L 5909391..5909596 931..1136 1030 100 Plus
3L 28110227 3L 5908969..5909130 683..844 810 100 Plus
3L 28110227 3L 5908583..5908707 475..599 625 100 Plus
3L 28110227 3L 5916913..5917031 1133..1251 595 100 Plus
3L 28110227 3L 5908812..5908899 598..685 440 100 Plus
3L 28110227 3L 5909210..5909296 845..931 435 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:26:25
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 5900505..5900981 1..477 2385 100 Plus
3L 28103327 3L 5910206..5910650 1251..1695 2225 100 Plus
3L 28103327 3L 5902491..5902696 931..1136 1030 100 Plus
3L 28103327 3L 5902069..5902230 683..844 810 100 Plus
3L 28103327 3L 5901683..5901807 475..599 625 100 Plus
3L 28103327 3L 5910013..5910131 1133..1251 595 100 Plus
3L 28103327 3L 5901912..5901999 598..685 440 100 Plus
3L 28103327 3L 5902310..5902396 845..931 435 100 Plus
Blast to na_te.dros performed on 2019-03-16 17:21:24 has no hits.

IP09451.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 17:22:42 Download gff for IP09451.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 5901776..5901862 845..931 97 -> Plus
chr3L 5909488..5909602 1137..1251 100 -> Plus
chr3L 5901958..5902162 932..1136 99 -> Plus
chr3L 5901538..5901696 686..844 97 -> Plus
chr3L 5899971..5900445 1..475 99 -> Plus
chr3L 5901150..5901273 476..599 97 -> Plus
chr3L 5901380..5901465 600..685 100 -> Plus
chr3L 5909678..5910111 1252..1685 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 16:58:48 Download gff for IP09451.complete
Subject Subject Range Query Range Percent Splice Strand
CG13288-RB 1..753 401..1153 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:00:56 Download gff for IP09451.complete
Subject Subject Range Query Range Percent Splice Strand
CG13288-RB 1..753 401..1153 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 16:54:38 Download gff for IP09451.complete
Subject Subject Range Query Range Percent Splice Strand
CG13288-RB 1..753 401..1153 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:41:28 Download gff for IP09451.complete
Subject Subject Range Query Range Percent Splice Strand
CG13288-RB 1..753 401..1153 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:56:59 Download gff for IP09451.complete
Subject Subject Range Query Range Percent Splice Strand
CG13288-RB 1..753 401..1153 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:58:48 Download gff for IP09451.complete
Subject Subject Range Query Range Percent Splice Strand
CG13288-RB 1..1685 1..1685 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:00:55 Download gff for IP09451.complete
Subject Subject Range Query Range Percent Splice Strand
CG13288-RB 1..1685 1..1685 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:54:38 Download gff for IP09451.complete
Subject Subject Range Query Range Percent Splice Strand
CG13288-RB 25..1709 1..1685 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:41:28 Download gff for IP09451.complete
Subject Subject Range Query Range Percent Splice Strand
CG13288-RB 1..1685 1..1685 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:56:59 Download gff for IP09451.complete
Subject Subject Range Query Range Percent Splice Strand
CG13288-RB 25..1709 1..1685 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:22:42 Download gff for IP09451.complete
Subject Subject Range Query Range Percent Splice Strand
3L 5907405..5907879 1..475 100 -> Plus
3L 5908584..5908707 476..599 100 -> Plus
3L 5908814..5908899 600..685 100 -> Plus
3L 5908972..5909130 686..844 100 -> Plus
3L 5909210..5909296 845..931 100 -> Plus
3L 5909392..5909596 932..1136 100 -> Plus
3L 5916917..5917031 1137..1251 100 -> Plus
3L 5917107..5917540 1252..1685 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:22:42 Download gff for IP09451.complete
Subject Subject Range Query Range Percent Splice Strand
3L 5907405..5907879 1..475 100 -> Plus
3L 5908584..5908707 476..599 100 -> Plus
3L 5908814..5908899 600..685 100 -> Plus
3L 5908972..5909130 686..844 100 -> Plus
3L 5909210..5909296 845..931 100 -> Plus
3L 5909392..5909596 932..1136 100 -> Plus
3L 5916917..5917031 1137..1251 100 -> Plus
3L 5917107..5917540 1252..1685 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:22:42 Download gff for IP09451.complete
Subject Subject Range Query Range Percent Splice Strand
3L 5907405..5907879 1..475 100 -> Plus
3L 5908584..5908707 476..599 100 -> Plus
3L 5908814..5908899 600..685 100 -> Plus
3L 5908972..5909130 686..844 100 -> Plus
3L 5909210..5909296 845..931 100 -> Plus
3L 5909392..5909596 932..1136 100 -> Plus
3L 5916917..5917031 1137..1251 100 -> Plus
3L 5917107..5917540 1252..1685 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:54:38 Download gff for IP09451.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 5900505..5900979 1..475 100 -> Plus
arm_3L 5901684..5901807 476..599 100 -> Plus
arm_3L 5901914..5901999 600..685 100 -> Plus
arm_3L 5902072..5902230 686..844 100 -> Plus
arm_3L 5902310..5902396 845..931 100 -> Plus
arm_3L 5902492..5902696 932..1136 100 -> Plus
arm_3L 5910017..5910131 1137..1251 100 -> Plus
arm_3L 5910207..5910640 1252..1685 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:20:26 Download gff for IP09451.complete
Subject Subject Range Query Range Percent Splice Strand
3L 5900505..5900979 1..475 100 -> Plus
3L 5901684..5901807 476..599 100 -> Plus
3L 5901914..5901999 600..685 100 -> Plus
3L 5902072..5902230 686..844 100 -> Plus
3L 5902310..5902396 845..931 100 -> Plus
3L 5902492..5902696 932..1136 100 -> Plus
3L 5910017..5910131 1137..1251 100 -> Plus
3L 5910207..5910640 1252..1685 100   Plus

IP09451.hyp Sequence

Translation from 400 to 1152

> IP09451.hyp
MAILESCCFWKDVRSGSFACAIYTLVYFGFSTLMFLFYLIEEQDFLLGNR
AQPLGESLLEKGDVTVVTVIFNILLLFCSILMVLSSVLLILGLQQNKRHL
LIPWISFMLGDLLIEVCHLVHLALSRRVKFDPIVGFIFTMDFFLLCLNLY
CLLCVISQYQTFRSQRAEMRLAASTASPIVVFTAAEKLTKAQQQQLHNNL
LQQLETGSGYGKRRRMLGAASPLITSQRPTNFSTITEEEEQQSRTALPGI
*

IP09451.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:04:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG13288-PB 250 CG13288-PB 1..250 1..250 1268 100 Plus
CG13288-PC 273 CG13288-PC 1..245 1..245 1243 100 Plus

IP09451.pep Sequence

Translation from 400 to 1152

> IP09451.pep
MAILESCCFWKDVRSGSFACAIYTLVYFGFSTLMFLFYLIEEQDFLLGNR
AQPLGESLLEKGDVTVVTVIFNILLLFCSILMVLSSVLLILGLQQNKRHL
LIPWISFMLGDLLIEVCHLVHLALSRRVKFDPIVGFIFTMDFFLLCLNLY
CLLCVISQYQTFRSQRAEMRLAASTASPIVVFTAAEKLTKAQQQQLHNNL
LQQLETGSGYGKRRRMLGAASPLITSQRPTNFSTITEEEEQQSRTALPGI
*

IP09451.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 14:56:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24003-PA 287 GF24003-PA 1..256 1..244 951 78.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 14:56:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15299-PA 287 GG15299-PA 1..254 1..245 1097 90.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 14:56:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH14687-PA 286 GH14687-PA 1..235 1..241 796 71.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:41:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG13288-PB 250 CG13288-PB 1..250 1..250 1268 100 Plus
CG13288-PC 273 CG13288-PC 1..245 1..245 1243 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 14:56:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI13301-PA 299 GI13301-PA 1..228 1..235 786 71.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 14:56:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL21059-PA 297 GL21059-PA 1..250 1..246 874 75.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 14:56:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA12174-PA 297 GA12174-PA 1..250 1..246 874 75.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 14:56:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM14732-PA 282 GM14732-PA 1..254 1..245 1063 92.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 14:56:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD13911-PA 282 GD13911-PA 1..254 1..245 1067 92.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 14:56:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12070-PA 279 GJ12070-PA 1..237 1..244 829 71.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 14:56:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK16662-PA 304 GK16662-PA 1..249 1..242 725 67.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 14:56:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21521-PA 286 GE21521-PA 1..253 1..245 1069 91.7 Plus