Clone IP09474 Report

Search the DGRC for IP09474

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:94
Well:74
Vector:pOT2
Associated Gene/TranscriptCG14282-RA
Protein status:IP09474.pep: gold
Preliminary Size:934
Sequenced Size:1106

Clone Sequence Records

IP09474.complete Sequence

1106 bp assembled on 2011-04-25

GenBank Submission: BT126352.1

> IP09474.complete
CATACATCTATTTGTTGTGAAAATATTCTACCCAATTAATCCTTAAAAAT
GTTGGCCGGCTGCCCCGATGAGCTGCCCAATCCGCACAAGAACTGCCTGC
ACGAGATGCTCCAGGCGTTGATCTGCAACGACAACGATGTGAAGCGCTTG
AACACGGAGCTAAGGAATCTGAATCTAGAGCTAAAGGCGGAGCTGGCCAA
GATTAACAAGGCGAACCAGAAGTGCGGGCACGAGAAGAAGGGCAAGGTAG
TTTGCGAGAGCACCGAGGATGTGACGAAATTCGCCCAGCGGATCAATAGC
CTGGAAGAGGTGACAGCGCACTTCACCCAGCGTAGTGAGGAGATTCGAAA
GAGGCGGGACAACATCATCATCTATGCCCGCCAGTGCCTGTATGCCTACA
ACGAGGAGAAGTGCAAGTTCAAGTCGTTCCACGAGAACACGGTGGACTAC
ATAAAGCGGACGGCGACACTCTCCCAGGATGCGGAGGTTATCCGGGCATG
CGGAAAGGAGGTGTGCGAGCTGCATAAGCGCTTCGTGCGTGAGGTGGCCA
AGCTGAAGAGCTGCGAGGCGGAGCTGCTGCCCTTTTTCAAACTGCTCAAG
GATTCCGATCCGAAGACCTACTGCGAGTGCTGCTGTTTCAAGGGATACGA
CTGGATGCCCAAGAGCAAGAATCTGGAGGCCGTGGATGCAATGGCTGGCG
AGATCAAGGAACAGATGGGCGACGTACTGGTCAGGGCCTTCGCTCAACTG
CACATTCATTCGCCGCAGGATCCACGCGCCTTTATTGCCGCCTATCTGAT
GAATCTTGATCGTAACGAGCAGGAAATGAAGGAGAAGCTCGTGATTTTCC
AAGCAGATCCAGCAGTGCAACCCCAGGAGCTTTCGGATCCCACATTCAAT
TGCGAGGATATTTGTCCGAAGCCTGAATGATATCATTATTAATCCACGAT
TGTATTCGAATAATAACTTTAAATTGGCGAGCTAAGTACACAGAATTTAT
TGCCACCAGCGGAAAAATTTAAATGAAAAGCGGCTTTCTTCAAACATTTT
ATTAATTCAAAATAAACACGCAATACATTTTGGGAAAAAAAAAAAAAAAA
AAAAAA

IP09474.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 10:34:46
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 15000940..15002023 1..1084 5375 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 10:34:45
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 19177004..19178088 1..1085 5425 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:11:22
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 18917835..18918919 1..1085 5425 100 Plus
Blast to na_te.dros performed on 2019-03-15 10:34:45 has no hits.

IP09474.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 10:35:39 Download gff for IP09474.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 15000940..15002023 1..1084 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-04-27 15:22:44 Download gff for IP09474.complete
Subject Subject Range Query Range Percent Splice Strand
CG14282-RA 1..882 49..930 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:20:11 Download gff for IP09474.complete
Subject Subject Range Query Range Percent Splice Strand
CG14282-RA 1..882 49..930 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:06:51 Download gff for IP09474.complete
Subject Subject Range Query Range Percent Splice Strand
CG14282-RA 1..882 49..930 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-04-27 15:22:44 Download gff for IP09474.complete
Subject Subject Range Query Range Percent Splice Strand
CG14282-RA 5..987 1..983 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:20:11 Download gff for IP09474.complete
Subject Subject Range Query Range Percent Splice Strand
CG14282-RA 5..987 1..983 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:06:51 Download gff for IP09474.complete
Subject Subject Range Query Range Percent Splice Strand
CG14282-RA 5..987 1..983 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:35:39 Download gff for IP09474.complete
Subject Subject Range Query Range Percent Splice Strand
3R 19177004..19178087 1..1084 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:35:39 Download gff for IP09474.complete
Subject Subject Range Query Range Percent Splice Strand
3R 19177004..19178087 1..1084 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:35:39 Download gff for IP09474.complete
Subject Subject Range Query Range Percent Splice Strand
3R 19177004..19178087 1..1084 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:20:11 Download gff for IP09474.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 15002726..15003809 1..1084 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 20:06:29 Download gff for IP09474.complete
Subject Subject Range Query Range Percent Splice Strand
3R 18917835..18918918 1..1084 100   Plus

IP09474.hyp Sequence

Translation from 48 to 929

> IP09474.hyp
MLAGCPDELPNPHKNCLHEMLQALICNDNDVKRLNTELRNLNLELKAELA
KINKANQKCGHEKKGKVVCESTEDVTKFAQRINSLEEVTAHFTQRSEEIR
KRRDNIIIYARQCLYAYNEEKCKFKSFHENTVDYIKRTATLSQDAEVIRA
CGKEVCELHKRFVREVAKLKSCEAELLPFFKLLKDSDPKTYCECCCFKGY
DWMPKSKNLEAVDAMAGEIKEQMGDVLVRAFAQLHIHSPQDPRAFIAAYL
MNLDRNEQEMKEKLVIFQADPAVQPQELSDPTFNCEDICPKPE*

IP09474.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:33:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG14282-PA 293 CG14282-PA 1..293 1..293 1562 100 Plus

IP09474.pep Sequence

Translation from 48 to 929

> IP09474.pep
MLAGCPDELPNPHKNCLHEMLQALICNDNDVKRLNTELRNLNLELKAELA
KINKANQKCGHEKKGKVVCESTEDVTKFAQRINSLEEVTAHFTQRSEEIR
KRRDNIIIYARQCLYAYNEEKCKFKSFHENTVDYIKRTATLSQDAEVIRA
CGKEVCELHKRFVREVAKLKSCEAELLPFFKLLKDSDPKTYCECCCFKGY
DWMPKSKNLEAVDAMAGEIKEQMGDVLVRAFAQLHIHSPQDPRAFIAAYL
MNLDRNEQEMKEKLVIFQADPAVQPQELSDPTFNCEDICPKPE*

IP09474.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 18:50:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF16539-PA 294 GF16539-PA 1..293 1..293 1251 77.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 18:50:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG23163-PA 293 GG23163-PA 1..293 1..293 1464 92.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 18:50:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH17363-PA 297 GH17363-PA 1..297 1..293 996 62.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:41:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG14282-PA 293 CG14282-PA 1..293 1..293 1562 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 18:50:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI23902-PA 299 GI23902-PA 1..298 1..291 996 63.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 18:50:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL12635-PA 296 GL12635-PA 1..293 1..293 1060 69.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 18:50:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA12879-PA 296 GA12879-PA 1..293 1..293 1060 69.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 18:50:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM26828-PA 293 GM26828-PA 1..293 1..293 1512 97.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 18:50:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD19276-PA 293 GD19276-PA 1..293 1..293 1525 98 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 18:50:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ23998-PA 295 GJ23998-PA 1..294 1..291 1000 66 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 18:50:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13800-PA 304 GK13800-PA 4..292 2..290 1033 66.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 18:51:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE25587-PA 293 GE25587-PA 1..293 1..293 1453 91.5 Plus