Clone IP09483 Report

Search the DGRC for IP09483

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:94
Well:83
Vector:pOT2
Associated Gene/TranscriptCG14579-RA
Protein status:IP09483.pep: gold
Preliminary Size:877
Sequenced Size:1173

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG14579 2008-04-29 Release 5.5 accounting
CG14579 2008-08-15 Release 5.9 accounting
CG14579 2008-12-18 5.12 accounting

Clone Sequence Records

IP09483.complete Sequence

1173 bp (1173 high quality bases) assembled on 2005-06-08

GenBank Submission: BT023576

> IP09483.complete
ACAGATTTGCCGTACCATTCAGTCTCAGCCAGAGCTCCGTTGGCTGAACA
ACAAAATCAAAATTTATATTTTTTTACAAGTTTTTCCATAAAAAGAAGTG
CATCCGTTTTCTAAGCAAGAAAGACGAAAAATGACCATAATGGCTATATC
AAACGACACATTTGAAAATGAACAGCAGGTGGCGGTAAGGCAAGAAGCAC
CCAATGCCATTGGTAACATCCCGGATGTGGTGGAGTCGGCTTCCCGCCCA
CAAAAATACACGTTCCATGAGATCTATCAGATGATTACAGCCCTCACCTG
GCCCCGAATTCTGTTTGATTTGCTCGTGCGCCACGAGTGGAACTCCATCT
TTTTGAGCCTAGGCTTTCTTATCCTCAATGCCTTCGAGGTCCTTCAAAGC
TTCAATCTGTTGCAACAGCTGGCTGTAGTCGGCATGATGATCCTGAGCAA
CATAATGATCTACAAGGCCATCCGGCCGTATGTGCGATTCCATCTTTACG
AGCGTCTGATCCGCGCCGATTTCAATGTGCACATCACCCAGGAAATGGTT
GTGCGCGTGGTCAACTGTGTAAATCGCTGCTTGGTCACGCTGCATTGCAT
CCTCTTTCAAACTGAAATCTTCGAGCTCTTTTTGATGATGCTTGCCCTGG
AGGCAGTGCGTAACATCATCTGGTATACTAACATCTTCTTGCTAATTAGG
ATCGTCTTATGTGTGACGTTGTTTTTTCCAAGGCTTTTCGATAATGATAT
TGATAATGCGTCGAGCAGAGCCTATTATCAGATATGTGTGCTGCAGATCG
TTGACAAGCTTGAGGAGATAGGCGTGGAGGTGCATCTAGGCATCATTGAG
CGCTGGAAGCAGGAAGTGGATGCCATGAGGGAGTTGTATTACGAGATTGA
GGACTGGCCAAACCAAGAGTAGTTTCATGATGATATCGAGATCTAGTAAA
ATATATGGCTTCGCCGAGGATAATAGCCCATTATGGCAGTTATGGATAAC
TTTTGTATTTAACTTCTTAATTGTTTCCATACACTCCATACAACTACAAT
GCCAAATTCGCACAATCTACCTATCAAAAACATCAAATTACACCTTACAC
TTTAAATTTGTCCTTGCTTTATTTCATTTAAATTAAATTATGTACACTGC
ACACTGAAAAAAAAAAAAAAAAA

IP09483.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:36:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG14579-RA 1194 CG14579-RA 36..1194 1..1159 5795 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 23:34:16
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 21058410..21059113 1..704 3520 100 Plus
chrX 22417052 chrX 21059226..21059678 704..1156 2265 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:58:29 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 23:34:14
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 21193253..21193956 1..704 3520 100 Plus
X 23542271 X 21194069..21194526 704..1161 2290 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:26:28
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 21178345..21179048 1..704 3520 100 Plus
X 23527363 X 21179161..21179618 704..1161 2290 100 Plus
Blast to na_te.dros performed on 2019-03-16 23:34:15 has no hits.

IP09483.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 23:35:16 Download gff for IP09483.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 21058410..21059113 1..704 100 -> Plus
chrX 21059227..21059678 705..1156 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:40:15 Download gff for IP09483.complete
Subject Subject Range Query Range Percent Splice Strand
CG14579-RA 1..792 131..922 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:01:01 Download gff for IP09483.complete
Subject Subject Range Query Range Percent Splice Strand
CG14579-RA 1..792 131..922 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:44:35 Download gff for IP09483.complete
Subject Subject Range Query Range Percent Splice Strand
CG14579-RA 1..792 131..922 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:41:32 Download gff for IP09483.complete
Subject Subject Range Query Range Percent Splice Strand
CG14579-RA 1..792 131..922 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:51:54 Download gff for IP09483.complete
Subject Subject Range Query Range Percent Splice Strand
CG14579-RA 1..792 131..922 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:44:26 Download gff for IP09483.complete
Subject Subject Range Query Range Percent Splice Strand
CG14579-RA 1..1156 1..1156 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:01:00 Download gff for IP09483.complete
Subject Subject Range Query Range Percent Splice Strand
CG14579-RA 1..1156 1..1156 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:44:35 Download gff for IP09483.complete
Subject Subject Range Query Range Percent Splice Strand
CG14579-RA 1..1156 1..1156 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:41:33 Download gff for IP09483.complete
Subject Subject Range Query Range Percent Splice Strand
CG14579-RA 1..1156 1..1156 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:51:54 Download gff for IP09483.complete
Subject Subject Range Query Range Percent Splice Strand
CG14579-RA 1..1156 1..1156 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:35:16 Download gff for IP09483.complete
Subject Subject Range Query Range Percent Splice Strand
X 21193253..21193956 1..704 100 -> Plus
X 21194070..21194521 705..1156 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:35:16 Download gff for IP09483.complete
Subject Subject Range Query Range Percent Splice Strand
X 21193253..21193956 1..704 100 -> Plus
X 21194070..21194521 705..1156 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:35:16 Download gff for IP09483.complete
Subject Subject Range Query Range Percent Splice Strand
X 21193253..21193956 1..704 100 -> Plus
X 21194070..21194521 705..1156 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:44:35 Download gff for IP09483.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 21064280..21064983 1..704 100 -> Plus
arm_X 21065097..21065548 705..1156 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:20:31 Download gff for IP09483.complete
Subject Subject Range Query Range Percent Splice Strand
X 21178345..21179048 1..704 100 -> Plus
X 21179162..21179613 705..1156 100   Plus

IP09483.pep Sequence

Translation from 130 to 921

> IP09483.pep
MTIMAISNDTFENEQQVAVRQEAPNAIGNIPDVVESASRPQKYTFHEIYQ
MITALTWPRILFDLLVRHEWNSIFLSLGFLILNAFEVLQSFNLLQQLAVV
GMMILSNIMIYKAIRPYVRFHLYERLIRADFNVHITQEMVVRVVNCVNRC
LVTLHCILFQTEIFELFLMMLALEAVRNIIWYTNIFLLIRIVLCVTLFFP
RLFDNDIDNASSRAYYQICVLQIVDKLEEIGVEVHLGIIERWKQEVDAMR
ELYYEIEDWPNQE*

IP09483.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 19:35:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF21718-PA 280 GF21718-PA 2..207 12..204 179 26.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 19:35:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG19713-PA 274 GG19713-PA 9..265 9..262 637 53.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:07:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG14579-PA 263 CG14579-PA 1..263 1..263 1356 100 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 19:35:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM23069-PA 264 GM23069-PA 1..264 4..263 1004 73.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 19:35:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD17522-PA 264 GD17522-PA 1..264 4..263 949 75.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 19:35:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE17912-PA 266 GE17912-PA 7..256 7..255 619 51.2 Plus

IP09483.hyp Sequence

Translation from 130 to 921

> IP09483.hyp
MTIMAISNDTFENEQQVAVRQEAPNAIGNIPDVVESASRPQKYTFHEIYQ
MITALTWPRILFDLLVRHEWNSIFLSLGFLILNAFEVLQSFNLLQQLAVV
GMMILSNIMIYKAIRPYVRFHLYERLIRADFNVHITQEMVVRVVNCVNRC
LVTLHCILFQTEIFELFLMMLALEAVRNIIWYTNIFLLIRIVLCVTLFFP
RLFDNDIDNASSRAYYQICVLQIVDKLEEIGVEVHLGIIERWKQEVDAMR
ELYYEIEDWPNQE*

IP09483.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:04:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG14579-PA 263 CG14579-PA 1..263 1..263 1356 100 Plus