Clone IP09524 Report

Search the DGRC for IP09524

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:95
Well:24
Vector:pOT2
Associated Gene/TranscriptCG11815-RA
Protein status:IP09524.pep: gold
Preliminary Size:852
Sequenced Size:1028

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG11815 2008-04-29 Release 5.5 accounting
CG11815 2008-08-15 Release 5.9 accounting
CG11815 2008-12-18 5.12 accounting

Clone Sequence Records

IP09524.complete Sequence

1028 bp (1028 high quality bases) assembled on 2005-06-08

GenBank Submission: BT023572

> IP09524.complete
ATGACATCTCCTGTTTTGAGCAACAGTAAAATTTAAAAACATTTACTTTA
AAACAAAAGTGCTCCCGAAAATGTCTAAGAATCCACTTCGATTGTTCATA
AAACCTGTAATTCTTCGCCGCCTGTCTGATAAGCCCAAGTTGAGCAACAA
GCCATCGAACACCCCTCGCCCACCAAAGGATCCACCGGATGAGGGCTACC
AACCGACCAGTGTCGATCACAATGGGATCGATGTGCCGCCGTTTGTGAGA
CCCTCTTCCTTCCGCCAGTTCAGTGGACCGGATGAGAAGCTGGGACCAGG
AGCAGGCAAAGCGCTGCCCTACAAGAACCCAACTTACTTTGGCTATCATC
GATTCTCATTTATGGAACTCACGGTCACGGCTGTGGAGTTACGAGACGAA
CGTCGATTGGACGGAGGACTACAGGCATCCATCGAAGCCGACGAAGAATC
CGAGTGTGGCGAGGCCCAACTGGAGACCATGAAGAAGCTGGAAAGCGAGT
GCGATGCGATACTCTCCAACCAAGCCAAGAAAATCCAGAAGGCCAAATCT
TCGGCCGAGGAGAAGTGTCTCCAGGAGATGAGTGAGGAGGAGCTAAAGGA
GTGGTGCAAGAAAAAGGAGGAGGACATCAAAAAGAAGGAGCAGGAAAAGA
AGGAGGCCAAGTCCTCGCCCAAGGAGAAGAAAATCCAGGACATGAGCGAG
GAGGAACTGAAGGCTTGGTGCCAGAAAAAGGAAGAGGACATCAAAAAGAA
GGAGCAGGAAAAGAAGGAGGCCAAGTCCTCGCCCAAGGAGAAGAAAGTCC
AGGACATGAGCGAGGATGAACTGAAAGCTTGGTGCCAAAAGAAGGAAGAA
GACATCAAAAAGAAGGAGCAACAAAAGAAGGAGGAAGGAAAGTGTGAAGG
CGATGACAACAAAAAGGATTAAATAAAGCAGACTGCGTTACTCTTGAAAA
ATGAACAATATTGTTCAAAAATGTACGTTATTTGGTAGCTTAATAAATGA
ATTGTAGTTTAAAAAAAAAAAAAAAAAA

IP09524.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:36:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG11815-RA 852 CG11815-RA 1..852 71..922 4260 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 23:35:06
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 1969753..1970762 1010..1 5050 100 Minus
chr3L 24539361 chr3L 1969879..1970109 770..540 795 89.6 Minus
chr3L 24539361 chr3L 1969993..1970223 884..654 795 89.6 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:58:34 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 23:35:04
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 1970189..1971200 1012..1 5060 100 Minus
3L 28110227 3L 1970317..1970547 770..540 795 89.6 Minus
3L 28110227 3L 1970431..1970661 884..654 795 89.6 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:26:22
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 1970189..1971200 1012..1 5060 100 Minus
Blast to na_te.dros performed on 2019-03-16 23:35:04 has no hits.

IP09524.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 23:35:43 Download gff for IP09524.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 1969753..1970106 657..1010 100 == Minus
chr3L 1970191..1970762 1..572 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:40:30 Download gff for IP09524.complete
Subject Subject Range Query Range Percent Splice Strand
CG11815-RA 1..852 71..922 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:00:50 Download gff for IP09524.complete
Subject Subject Range Query Range Percent Splice Strand
CG11815-RA 1..852 71..922 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:45:16 Download gff for IP09524.complete
Subject Subject Range Query Range Percent Splice Strand
CG11815-RA 1..852 71..922 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:41:23 Download gff for IP09524.complete
Subject Subject Range Query Range Percent Splice Strand
CG11815-RA 1..852 71..922 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:52:45 Download gff for IP09524.complete
Subject Subject Range Query Range Percent Splice Strand
CG11815-RA 1..852 71..922 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:44:03 Download gff for IP09524.complete
Subject Subject Range Query Range Percent Splice Strand
CG11815-RA 1..852 71..922 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:00:50 Download gff for IP09524.complete
Subject Subject Range Query Range Percent Splice Strand
CG11815-RA 110..1119 1..1010 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:45:16 Download gff for IP09524.complete
Subject Subject Range Query Range Percent Splice Strand
CG11815-RA 1..1010 1..1010 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:41:23 Download gff for IP09524.complete
Subject Subject Range Query Range Percent Splice Strand
CG11815-RA 1..852 71..922 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:52:45 Download gff for IP09524.complete
Subject Subject Range Query Range Percent Splice Strand
CG11815-RA 1..1010 1..1010 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:35:43 Download gff for IP09524.complete
Subject Subject Range Query Range Percent Splice Strand
3L 1970191..1971200 1..1010 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:35:43 Download gff for IP09524.complete
Subject Subject Range Query Range Percent Splice Strand
3L 1970191..1971200 1..1010 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:35:43 Download gff for IP09524.complete
Subject Subject Range Query Range Percent Splice Strand
3L 1970191..1971200 1..1010 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:45:16 Download gff for IP09524.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 1970191..1971200 1..1010 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:20:20 Download gff for IP09524.complete
Subject Subject Range Query Range Percent Splice Strand
3L 1970191..1971200 1..1010 100   Minus

IP09524.hyp Sequence

Translation from 70 to 921

> IP09524.hyp
MSKNPLRLFIKPVILRRLSDKPKLSNKPSNTPRPPKDPPDEGYQPTSVDH
NGIDVPPFVRPSSFRQFSGPDEKLGPGAGKALPYKNPTYFGYHRFSFMEL
TVTAVELRDERRLDGGLQASIEADEESECGEAQLETMKKLESECDAILSN
QAKKIQKAKSSAEEKCLQEMSEEELKEWCKKKEEDIKKKEQEKKEAKSSP
KEKKIQDMSEEELKAWCQKKEEDIKKKEQEKKEAKSSPKEKKVQDMSEDE
LKAWCQKKEEDIKKKEQQKKEEGKCEGDDNKKD*

IP09524.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:04:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG11815-PA 283 CG11815-PA 1..283 1..283 1487 100 Plus
rudhira-PE 2075 CG43154-PE 1496..1647 122..282 183 32.1 Plus
rudhira-PC 2075 CG43154-PC 1496..1647 122..282 183 32.1 Plus
rudhira-PE 2075 CG43154-PE 1443..1603 106..274 177 29.6 Plus
rudhira-PC 2075 CG43154-PC 1443..1603 106..274 177 29.6 Plus
rudhira-PE 2075 CG43154-PE 1432..1597 122..283 174 29.8 Plus
rudhira-PC 2075 CG43154-PC 1432..1597 122..283 174 29.8 Plus
CG2839-PA 826 CG2839-PA 243..415 112..282 172 30.2 Plus
CG2839-PA 826 CG2839-PA 304..465 124..276 170 26.5 Plus
rudhira-PE 2075 CG43154-PE 1349..1513 110..283 169 31.1 Plus
rudhira-PE 2075 CG43154-PE 1418..1562 122..271 169 30.7 Plus
rudhira-PC 2075 CG43154-PC 1349..1513 110..283 169 31.1 Plus
rudhira-PC 2075 CG43154-PC 1418..1562 122..271 169 30.7 Plus
CG2839-PA 826 CG2839-PA 571..743 109..283 168 27 Plus
rudhira-PE 2075 CG43154-PE 1378..1541 122..283 167 29.8 Plus
rudhira-PC 2075 CG43154-PC 1378..1541 122..283 167 29.8 Plus
CG2839-PA 826 CG2839-PA 550..726 106..283 165 24.9 Plus
CG2839-PA 826 CG2839-PA 305..449 131..283 163 26.8 Plus
CG2839-PA 826 CG2839-PA 377..514 151..283 162 28.1 Plus
CG2839-PA 826 CG2839-PA 392..555 124..283 162 24.6 Plus
CG2839-PA 826 CG2839-PA 543..714 109..283 162 22.9 Plus
CG2839-PA 826 CG2839-PA 339..502 125..283 161 26.2 Plus
CG2839-PA 826 CG2839-PA 619..748 151..276 158 29.5 Plus
rudhira-PE 2075 CG43154-PE 1463..1632 108..274 157 28.3 Plus
rudhira-PC 2075 CG43154-PC 1463..1632 108..274 157 28.3 Plus
CG2839-PA 826 CG2839-PA 316..482 109..282 157 24.1 Plus
CG2839-PA 826 CG2839-PA 271..438 124..283 156 23.2 Plus
rudhira-PE 2075 CG43154-PE 1400..1569 118..283 155 29 Plus
rudhira-PC 2075 CG43154-PC 1400..1569 118..283 155 29 Plus
CG2839-PA 826 CG2839-PA 521..690 110..283 155 24.9 Plus
CG13337-PB 680 CG13337-PB 536..680 125..274 153 27.2 Plus
CG2839-PA 826 CG2839-PA 431..600 108..283 151 22.6 Plus

IP09524.pep Sequence

Translation from 70 to 921

> IP09524.pep
MSKNPLRLFIKPVILRRLSDKPKLSNKPSNTPRPPKDPPDEGYQPTSVDH
NGIDVPPFVRPSSFRQFSGPDEKLGPGAGKALPYKNPTYFGYHRFSFMEL
TVTAVELRDERRLDGGLQASIEADEESECGEAQLETMKKLESECDAILSN
QAKKIQKAKSSAEEKCLQEMSEEELKEWCKKKEEDIKKKEQEKKEAKSSP
KEKKIQDMSEEELKAWCQKKEEDIKKKEQEKKEAKSSPKEKKVQDMSEDE
LKAWCQKKEEDIKKKEQQKKEEGKCEGDDNKKD*

IP09524.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 14:57:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF21624-PA 358 GF21624-PA 1..264 1..264 543 53.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 14:57:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14540-PA 257 GG14540-PA 1..257 1..283 994 75.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 14:57:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13815-PA 395 GH13815-PA 2..185 6..192 481 47.8 Plus
Dgri\GH19631-PA 449 GH19631-PA 2..156 6..144 447 52.9 Plus
Dgri\GH20872-PA 290 GH20872-PA 49..117 39..108 158 44.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:35:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG11815-PA 283 CG11815-PA 1..283 1..283 1487 100 Plus
rudhira-PE 2075 CG43154-PE 1496..1647 122..282 183 32.1 Plus
rudhira-PC 2075 CG43154-PC 1496..1647 122..282 183 32.1 Plus
rudhira-PE 2075 CG43154-PE 1443..1603 106..274 177 29.6 Plus
rudhira-PC 2075 CG43154-PC 1443..1603 106..274 177 29.6 Plus
rudhira-PE 2075 CG43154-PE 1432..1597 122..283 174 29.8 Plus
rudhira-PC 2075 CG43154-PC 1432..1597 122..283 174 29.8 Plus
CG2839-PA 826 CG2839-PA 243..415 112..282 172 30.2 Plus
CG2839-PA 826 CG2839-PA 304..465 124..276 170 26.5 Plus
rudhira-PE 2075 CG43154-PE 1349..1513 110..283 169 31.1 Plus
rudhira-PE 2075 CG43154-PE 1418..1562 122..271 169 30.7 Plus
rudhira-PC 2075 CG43154-PC 1349..1513 110..283 169 31.1 Plus
rudhira-PC 2075 CG43154-PC 1418..1562 122..271 169 30.7 Plus
CG2839-PA 826 CG2839-PA 571..743 109..283 168 27 Plus
rudhira-PE 2075 CG43154-PE 1378..1541 122..283 167 29.8 Plus
rudhira-PC 2075 CG43154-PC 1378..1541 122..283 167 29.8 Plus
CG2839-PA 826 CG2839-PA 550..726 106..283 165 24.9 Plus
CG2839-PA 826 CG2839-PA 305..449 131..283 163 26.8 Plus
CG2839-PA 826 CG2839-PA 377..514 151..283 162 28.1 Plus
CG2839-PA 826 CG2839-PA 392..555 124..283 162 24.6 Plus
CG2839-PA 826 CG2839-PA 543..714 109..283 162 22.9 Plus
CG2839-PA 826 CG2839-PA 339..502 125..283 161 26.2 Plus
CG2839-PA 826 CG2839-PA 619..748 151..276 158 29.5 Plus
rudhira-PE 2075 CG43154-PE 1463..1632 108..274 157 28.3 Plus
rudhira-PC 2075 CG43154-PC 1463..1632 108..274 157 28.3 Plus
CG2839-PA 826 CG2839-PA 316..482 109..282 157 24.1 Plus
CG2839-PA 826 CG2839-PA 271..438 124..283 156 23.2 Plus
rudhira-PE 2075 CG43154-PE 1400..1569 118..283 155 29 Plus
rudhira-PC 2075 CG43154-PC 1400..1569 118..283 155 29 Plus
CG2839-PA 826 CG2839-PA 521..690 110..283 155 24.9 Plus
CG13337-PB 680 CG13337-PB 536..680 125..274 153 27.2 Plus
CG13337-PA 680 CG13337-PA 536..680 125..274 153 27.2 Plus
CG2839-PA 826 CG2839-PA 431..600 108..283 151 22.6 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 14:57:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI24793-PA 237 GI24793-PA 3..131 23..151 401 58.9 Plus
Dmoj\GI18630-PA 150 GI18630-PA 72..143 36..109 157 41.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 14:57:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL18535-PA 326 GL18535-PA 2..303 6..283 523 41.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 14:57:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA25679-PA 326 GA25679-PA 2..303 6..283 532 41.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 14:57:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM14149-PA 279 GM14149-PA 1..279 1..283 1054 84.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 14:57:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD13418-PA 279 GD13418-PA 1..279 1..283 1035 86.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 14:57:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22516-PA 319 GJ22516-PA 19..169 30..199 434 50 Plus
Dvir\GJ20700-PA 122 GJ20700-PA 41..111 32..104 181 52.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 14:57:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK15171-PA 679 GK15171-PA 3..226 7..259 540 44.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 14:57:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20894-PA 306 GE20894-PA 1..306 1..283 943 76.8 Plus