Clone IP09525 Report

Search the DGRC for IP09525

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:95
Well:25
Vector:pOT2
Associated Gene/TranscriptCG12256-RA
Protein status:IP09525.pep: gold
Preliminary Size:777
Sequenced Size:953

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG12256 2005-01-01 Successful iPCR screen
CG12256 2008-04-29 Release 5.5 accounting
CG12256 2008-08-15 Release 5.9 accounting
CG12256 2008-12-18 5.12 accounting

Clone Sequence Records

IP09525.complete Sequence

953 bp (953 high quality bases) assembled on 2005-03-06

GenBank Submission: BT023178

> IP09525.complete
CATGAACGGAGTAACTTATTTTGTGCTACTTCTTAGCTCTACTTTGTTAG
CTCTAGGTGGAGTTCAAAGTAAGCCCATGGGCAATGTCATCGATTTGGAC
AAGTATTTCGAGGAGGCAGACCTTAATTCCCAGGAGCGAGTTGTTGGCGG
TTACGATGTGCCAGAGGATGAATATGTTCCCTACCAGGTGTCCATGCAGT
TTCTTACCCGCAGTGGAAAGATGCGACACTTCTGTGGTGGATCCCTGATA
GCCCCAAATCGCGTCCTTACCGCTGCCCACTGCGTCAATGGCCAGAATGC
CAGTCGAATTAGCGTAGTTGCTGGGATTAGGGATCTCAACGATAGCTCCG
GCTTCCGATCGCAGGTGCAGTCGTACGAGATGAACGAGAACTACCAGGAG
CTGGTGACTAGTGACATTGCCATCCTCAAGATCGATCCGCCCTTTGAGCT
GGACGAGAAGCGTGTGTCCACCATCGACGTCAGTGGATCGGACATGGTAG
GTGCCGATCAGGAGGTTCTCCTCACCGGATGGGGTTCTGTCTTCCACTTT
GGCACAGGTCCTTTCGCCAAATATCCCACTGTACTCCAGAAACTCGACTA
CAAGACACTGAGCAATTCCAAGTGCAAGGAGACGATGACCCAGCTGACGG
ACACAGAGATCTGTGCCTTGGAAAGGTTTGGCAAGGGTGCCTGTAATGGC
GATTCTGGCGGTCCTTTGGTGATGAAGAGTGGTGAGTCCTATAAACAGGT
GGGCGTCGTCTCCTATGGAACTGCATTCTGTGCCTCGAACAATCCTGATG
TCTATACCAGAGTGTCCATGTTTGACGGTTGGATTAAGGAAAGAATGGTC
TAAAGCAATATCACAATGTACAAATTGTCAAAACAAATATTGGAATATCG
ATCGCGAGTTATTCAAATATATTCTGATAAACTCTAAAAAAAAAAAAAAA
AAA

IP09525.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:47:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG12256-RA 1086 CG12256-RA 55..990 1..936 4680 100 Plus
nc_16247.a 865 nc_16247.a 1..799 893..96 3910 99.4 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 01:31:52
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 8050975..8051577 698..96 3015 100 Minus
chr3R 27901430 chr3R 8050676..8050917 935..694 1195 99.6 Minus
chr3R 27901430 chr3R 8051639..8051733 95..1 475 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:58:35 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 01:31:50
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 12225581..12226183 698..96 3015 100 Minus
3R 32079331 3R 12225281..12225523 936..694 1200 99.6 Minus
3R 32079331 3R 12226245..12226339 95..1 475 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:37:21
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 11966412..11967014 698..96 3015 100 Minus
3R 31820162 3R 11966112..11966354 936..694 1200 99.5 Minus
3R 31820162 3R 11967076..11967170 95..1 475 100 Minus
Blast to na_te.dros performed on 2019-03-16 01:31:51 has no hits.

IP09525.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 01:32:56 Download gff for IP09525.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 8050676..8050913 698..935 100 <- Minus
chr3R 8050976..8051577 96..697 100 <- Minus
chr3R 8051639..8051733 1..95 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:40:32 Download gff for IP09525.complete
Subject Subject Range Query Range Percent Splice Strand
CG12256-RA 1..852 2..853 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:17:43 Download gff for IP09525.complete
Subject Subject Range Query Range Percent Splice Strand
CG12256-RA 1..852 2..853 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:55:36 Download gff for IP09525.complete
Subject Subject Range Query Range Percent Splice Strand
CG12256-RA 1..852 2..853 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:02:03 Download gff for IP09525.complete
Subject Subject Range Query Range Percent Splice Strand
CG12256-RA 1..852 2..853 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 04:35:39 Download gff for IP09525.complete
Subject Subject Range Query Range Percent Splice Strand
CG12256-RA 1..852 2..853 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:17:21 Download gff for IP09525.complete
Subject Subject Range Query Range Percent Splice Strand
CG12256-RA 1..935 1..935 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:17:43 Download gff for IP09525.complete
Subject Subject Range Query Range Percent Splice Strand
CG12256-RA 1..935 1..935 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:55:36 Download gff for IP09525.complete
Subject Subject Range Query Range Percent Splice Strand
CG12256-RA 1..935 1..935 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:02:03 Download gff for IP09525.complete
Subject Subject Range Query Range Percent Splice Strand
CG12256-RA 1..935 1..935 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 04:35:39 Download gff for IP09525.complete
Subject Subject Range Query Range Percent Splice Strand
CG12256-RA 1..935 1..935 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:32:56 Download gff for IP09525.complete
Subject Subject Range Query Range Percent Splice Strand
3R 12225282..12225519 698..935 100 <- Minus
3R 12225582..12226183 96..697 100 <- Minus
3R 12226245..12226339 1..95 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:32:56 Download gff for IP09525.complete
Subject Subject Range Query Range Percent Splice Strand
3R 12225282..12225519 698..935 100 <- Minus
3R 12225582..12226183 96..697 100 <- Minus
3R 12226245..12226339 1..95 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:32:56 Download gff for IP09525.complete
Subject Subject Range Query Range Percent Splice Strand
3R 12225282..12225519 698..935 100 <- Minus
3R 12225582..12226183 96..697 100 <- Minus
3R 12226245..12226339 1..95 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:55:36 Download gff for IP09525.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 8051004..8051241 698..935 100 <- Minus
arm_3R 8051304..8051905 96..697 100 <- Minus
arm_3R 8051967..8052061 1..95 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:37:50 Download gff for IP09525.complete
Subject Subject Range Query Range Percent Splice Strand
3R 11966113..11966350 698..935 100 <- Minus
3R 11966413..11967014 96..697 100 <- Minus
3R 11967076..11967170 1..95 100   Minus

IP09525.hyp Sequence

Translation from 0 to 852

> IP09525.hyp
MNGVTYFVLLLSSTLLALGGVQSKPMGNVIDLDKYFEEADLNSQERVVGG
YDVPEDEYVPYQVSMQFLTRSGKMRHFCGGSLIAPNRVLTAAHCVNGQNA
SRISVVAGIRDLNDSSGFRSQVQSYEMNENYQELVTSDIAILKIDPPFEL
DEKRVSTIDVSGSDMVGADQEVLLTGWGSVFHFGTGPFAKYPTVLQKLDY
KTLSNSKCKETMTQLTDTEICALERFGKGACNGDSGGPLVMKSGESYKQV
GVVSYGTAFCASNNPDVYTRVSMFDGWIKERMV*

IP09525.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:04:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG12256-PA 283 CG12256-PA 1..283 1..283 1473 100 Plus
CG17404-PB 275 CG17404-PB 2..269 3..278 639 50.7 Plus
CG3916-PA 267 CG3916-PA 27..259 43..280 458 42.5 Plus
CG1304-PA 260 CG1304-PA 31..254 46..279 315 35 Plus
Ser6-PA 259 CG2071-PA 31..255 46..280 310 34.4 Plus

IP09525.pep Sequence

Translation from 1 to 852

> IP09525.pep
MNGVTYFVLLLSSTLLALGGVQSKPMGNVIDLDKYFEEADLNSQERVVGG
YDVPEDEYVPYQVSMQFLTRSGKMRHFCGGSLIAPNRVLTAAHCVNGQNA
SRISVVAGIRDLNDSSGFRSQVQSYEMNENYQELVTSDIAILKIDPPFEL
DEKRVSTIDVSGSDMVGADQEVLLTGWGSVFHFGTGPFAKYPTVLQKLDY
KTLSNSKCKETMTQLTDTEICALERFGKGACNGDSGGPLVMKSGESYKQV
GVVSYGTAFCASNNPDVYTRVSMFDGWIKERMV*

IP09525.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 16:23:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF17737-PA 280 GF17737-PA 1..279 1..282 1394 91.1 Plus
Dana\GF17738-PA 271 GF17738-PA 30..265 43..278 638 53.9 Plus
Dana\GF17236-PA 315 GF17236-PA 32..261 46..280 474 42.6 Plus
Dana\GF12406-PA 285 GF12406-PA 37..276 46..282 322 34.9 Plus
Dana\GF17863-PA 269 GF17863-PA 20..253 38..282 307 32.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 16:23:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG17150-PA 282 GG17150-PA 1..282 1..283 1370 92.2 Plus
Dere\GG17151-PA 274 GG17151-PA 30..272 43..282 659 55 Plus
Dere\GG18673-PA 267 GG18673-PA 30..259 46..280 469 43.5 Plus
Dere\zetaTry-PA 281 GG22664-PA 1..274 1..278 305 31.9 Plus
Dere\GG22017-PA 273 GG22017-PA 36..259 45..282 304 35.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 16:23:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15433-PA 279 GH15433-PA 7..278 7..282 1265 85.1 Plus
Dgri\GH15444-PA 275 GH15444-PA 4..271 8..282 622 47.3 Plus
Dgri\GH17316-PA 288 GH17316-PA 38..279 38..280 454 42.1 Plus
Dgri\GH17321-PA 246 GH17321-PA 17..235 60..282 307 33.2 Plus
Dgri\GH22866-PA 255 GH22866-PA 4..249 7..279 306 33.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:48:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG12256-PA 283 CG12256-PA 1..283 1..283 1473 100 Plus
CG17404-PB 275 CG17404-PB 2..269 3..278 639 50.7 Plus
CG3916-PA 267 CG3916-PA 27..259 43..280 458 42.5 Plus
CG31269-PB 273 CG31269-PB 1..259 1..282 320 33.9 Plus
CG1304-PA 260 CG1304-PA 31..254 46..279 315 35 Plus
Ser6-PA 259 CG2071-PA 31..255 46..280 310 34.4 Plus
CG16749-PA 265 CG16749-PA 29..262 46..283 297 33.5 Plus
CG17571-PB 258 CG17571-PB 30..251 46..278 294 35.7 Plus
CG17571-PA 258 CG17571-PA 30..251 46..278 294 35.7 Plus
zetaTry-PA 280 CG12387-PA 38..273 46..278 292 34.7 Plus
CG10041-PB 287 CG10041-PB 51..266 60..282 289 32.3 Plus
gammaTry-PA 253 CG30028-PA 4..249 7..278 285 35 Plus
CG30025-PA 253 CG30025-PA 4..249 7..278 285 35 Plus
deltaTry-PA 253 CG12351-PA 4..249 7..278 285 35 Plus
CG30031-PA 253 CG30031-PA 4..249 7..278 285 35 Plus
CG5246-PA 272 CG5246-PA 39..265 44..282 285 32.5 Plus
CG3355-PA 314 CG3355-PA 75..304 46..280 281 33.1 Plus
CG18735-PA 364 CG18735-PA 76..313 40..280 280 32.4 Plus
CG12951-PA 265 CG12951-PA 26..262 43..283 277 32 Plus
CG31954-PA 277 CG31954-PA 8..273 9..280 276 32.5 Plus
alphaTry-PA 256 CG18444-PA 5..249 8..278 275 33.5 Plus
CG32271-PA 248 CG32271-PA 17..246 39..282 273 34.6 Plus
CG34458-PA 257 CG34458-PA 23..253 38..280 273 30 Plus
thetaTry-PA 262 CG12385-PA 34..255 46..278 272 36.3 Plus
Jon65Aiv-PA 271 CG6467-PA 37..266 46..279 270 32.1 Plus
lambdaTry-PA 272 CG12350-PA 35..258 46..280 268 32.8 Plus
CG9676-PA 251 CG9676-PA 25..248 44..281 263 33.3 Plus
l(2)k05911-PC 639 CG31728-PC 397..634 44..278 261 32.4 Plus
Sb-PB 787 CG4316-PB 541..786 44..282 259 31.2 Plus
Sb-PA 787 CG4316-PA 541..786 44..282 259 31.2 Plus
CG4998-PA 891 CG4998-PA 648..885 55..280 258 30.5 Plus
CG4998-PB 1185 CG4998-PB 942..1179 55..280 258 30.5 Plus
CG31266-PB 282 CG31266-PB 9..276 9..282 257 28.7 Plus
CG11836-PI 281 CG11836-PI 40..274 42..282 255 29.4 Plus
CG11836-PJ 333 CG11836-PJ 92..326 42..282 255 29.4 Plus
CG17477-PA 267 CG17477-PA 27..251 47..282 254 29.3 Plus
epsilonTry-PA 256 CG18681-PA 4..250 7..279 253 33.2 Plus
CG5255-PA 273 CG5255-PA 26..253 43..282 253 28.7 Plus
etaTry-PA 262 CG12386-PA 24..257 43..281 251 29.9 Plus
Jon99Fi-PA 267 CG18030-PA 31..261 40..280 251 33.1 Plus
CG32808-PA 284 CG32808-PA 29..257 46..280 250 32.1 Plus
Jon99Cii-PA 265 CG31034-PA 33..259 44..280 249 33.6 Plus
Jon99Ciii-PB 265 CG31362-PB 33..259 44..280 249 33.6 Plus
Jon99Ciii-PA 265 CG31362-PA 33..259 44..280 249 33.6 Plus
CG4053-PB 265 CG4053-PB 34..254 46..279 247 29.6 Plus
CG13430-PB 267 CG13430-PB 25..261 40..280 247 29.3 Plus
CG13430-PA 267 CG13430-PA 25..261 40..280 247 29.3 Plus
Jon99Fii-PA 267 CG2229-PA 31..261 40..280 247 32.7 Plus
yip7-PA 270 CG6457-PA 8..266 15..280 247 29.7 Plus
CG31265-PA 266 CG31265-PA 36..258 46..282 246 29.6 Plus
CG32270-PA 259 CG32270-PA 21..255 37..282 245 32.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 16:23:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI22461-PA 282 GI22461-PA 9..281 7..282 1280 85.9 Plus
Dmoj\GI22463-PA 274 GI22463-PA 3..268 7..280 619 48 Plus
Dmoj\GI22460-PA 283 GI22460-PA 42..272 46..278 491 44.7 Plus
Dmoj\GI24441-PA 272 GI24441-PA 3..266 7..283 311 30.4 Plus
Dmoj\GI10284-PA 248 GI10284-PA 27..244 60..282 300 33.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 16:23:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL21565-PA 282 GL21565-PA 7..281 8..282 1325 88 Plus
Dper\GL21566-PA 222 GL21566-PA 1..221 65..282 558 51.5 Plus
Dper\GL22270-PA 264 GL22270-PA 28..257 46..280 479 43 Plus
Dper\GL27271-PA 271 GL27271-PA 34..257 45..282 328 36.8 Plus
Dper\GL17342-PA 280 GL17342-PA 25..274 37..282 324 34.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 16:23:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA11513-PA 282 GA11513-PA 7..281 8..282 1321 87.6 Plus
Dpse\GA26337-PA 222 GA26337-PA 1..221 65..282 564 52.4 Plus
Dpse\GA17770-PA 278 GA17770-PA 4..271 4..280 478 39.8 Plus
Dpse\GA16138-PA 271 GA16138-PA 34..254 45..279 328 37.2 Plus
Dpse\GA11599-PA 280 GA11599-PA 25..274 37..282 322 34.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 16:23:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM26032-PA 283 GM26032-PA 1..282 1..282 1495 98.6 Plus
Dsec\GM26033-PA 274 GM26033-PA 30..268 43..278 657 55.5 Plus
Dsec\GM24004-PA 267 GM24004-PA 27..259 43..280 469 43.3 Plus
Dsec\GM22650-PA 259 GM22650-PA 31..256 46..281 306 34.3 Plus
Dsec\GM22649-PA 260 GM22649-PA 31..255 46..280 301 33.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 16:23:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD20590-PA 283 GD20590-PA 1..282 1..282 1505 99.6 Plus
Dsim\GD20591-PA 295 GD20591-PA 51..293 43..282 660 55 Plus
Dsim\GD18805-PA 267 GD18805-PA 27..259 43..280 470 43.3 Plus
Dsim\GD19140-PA 274 GD19140-PA 22..260 30..282 324 34.2 Plus
Dsim\GD15519-PA 259 GD15519-PA 31..256 46..281 305 33.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 16:23:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ10061-PA 280 GJ10061-PA 22..279 25..282 1249 88.4 Plus
Dvir\GJ10062-PA 271 GJ10062-PA 33..270 46..282 640 53.3 Plus
Dvir\GJ10060-PA 285 GJ10060-PA 48..272 56..280 477 42.5 Plus
Dvir\GJ10717-PA 272 GJ10717-PA 18..265 22..282 333 33.3 Plus
Dvir\GJ18895-PA 256 GJ18895-PA 27..252 46..281 286 33.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 16:23:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK11562-PA 274 GK11562-PA 18..273 27..282 1241 87.9 Plus
Dwil\GK11563-PA 297 GK11563-PA 51..293 43..281 615 49.4 Plus
Dwil\GK11536-PA 260 GK11536-PA 18..253 40..280 487 44.9 Plus
Dwil\GK12195-PA 272 GK12195-PA 29..255 39..279 333 35.1 Plus
Dwil\GK12200-PA 276 GK12200-PA 40..269 41..282 322 34.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 16:23:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24539-PA 282 GE24539-PA 1..281 1..282 1449 96.5 Plus
Dyak\GE24540-PA 274 GE24540-PA 30..272 43..282 646 53.4 Plus
Dyak\GE26165-PA 267 GE26165-PA 21..259 37..280 475 43.1 Plus
Dyak\GE24613-PA 274 GE24613-PA 30..260 38..282 318 34.9 Plus
Dyak\GE15325-PA 260 GE15325-PA 31..255 46..280 317 34.4 Plus