Associations are from manual ordering of a clone or by a periodic analysis.
Clone Sequence Records
IP09589.complete Sequence
1134 bp (1134 high quality bases) assembled on 2006-04-12
GenBank Submission: BT025120
> IP09589.complete
GGAACAACAATACAGTTACTTCAGCGATTTCCCGTCCGGAGAGAAAATGG
CTCTTGTGAAGACGTACACCATCGACAATAACTCCATTCCATGGATTCTG
TGGCTACCGCCATTAACGGAAGTGGATAGGAAATCGCCGGGTGGGAGGTT
CACATTTGATGGGCCAAAGGTGGTGGCGTTTCACTTTGTTAAGAACCGGC
ACGGAGACACGTTGGACAAGTGGATAAGTCTGCTCGATGAGTTGGCACAG
GAGTACGCCGGTCGTATATTGTTCGGATTGCGTGACATCTCCAACATCGG
GGAGTTCAATCCGAACCTAAATCCCGACGACTTTGGCAGCTACCGGAAGG
GATTGCCACCGCGAATCTATGGCAAGGACTGTGAGGGCCGAGTGTACGAT
ATGCACAAGCTGGTCAACGCCAAATACCTGAGGGAGTTTTGCGACCAGTT
GCTGGCGGATCAACTCTTCCGTGCCGTAGTCCTGGGCGCCACTGCCTCAC
TGGACTCCAAGCCAATGAATTACTTTGAGTTGCGGGAAGAGAGCAGCAGC
GATATGCTGGTGATGCTATATGATCCTGCCTGCTACTACTGGCCCATTCA
GAAGAGGATGCTGCGCAAGCTGATCCGCCTGCTGGCCAGCGAGGATCTGC
CCATTGTGATCGTAGACAAGGCGAATAACTACCTGGGCGTGGGCTTCACC
CGTTGGCTGCAGATGGTCAACTGTCACGGCTCCACCATCTTCACATCGCC
ACGTCGCGATGGCTGGGATATTAAGTTGTCGGTGCGAATGGAGAGCACAC
GTGGCTACCTGCGATACATCGCCCGAAACAGGCAGCCGGAGCTAATTGAC
TTCGATGCCGATGGGGAGCCCAGAGCACTGGAGCAGGCCGTGGAGTATAT
ACAGTATTTGTTTTAGATCTTGGCGCACTCGACTCGAAGTGAGTGGCAAG
TCGCATAAATATTATAACTATAATCTATAACTCACTTTAAGGATGAGTTG
GCTTTTCAAGCCAGCCATCTCGGATAAGTATCCGTTAAATTACCATTTAA
AAATTAAATGTTAGAATTGAGCATTGTTACCAATACCACTCCTATTTACT
AAATATATTTATCTGCAAAAAAAAAAAAAAAAAA
IP09589.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 17:28:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14695-RA | 1116 | CG14695-RA | 1..1116 | 1..1116 | 5580 | 100 | Plus |
Sodh-2.b | 1448 | Sodh-2.b | 1385..1448 | 1117..1054 | 320 | 100 | Minus |
Sodh-2.a | 1448 | Sodh-2.a | 1385..1448 | 1117..1054 | 320 | 100 | Minus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 20:01:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3R | 27901430 | chr3R | 6703741..6704856 | 1116..1 | 5580 | 100 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:58:43 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 20:01:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 10878203..10879319 | 1117..1 | 5585 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:20:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 31820162 | 3R | 10619034..10620150 | 1117..1 | 5585 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-16 20:01:14 has no hits.
IP09589.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 20:02:09 Download gff for
IP09589.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3R | 6703741..6704856 | 1..1116 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:40:50 Download gff for
IP09589.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14695-RA | 1..870 | 47..916 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:51:20 Download gff for
IP09589.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14695-RA | 1..870 | 47..916 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:50:56 Download gff for
IP09589.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14695-RA | 1..870 | 47..916 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:32:01 Download gff for
IP09589.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14695-RA | 1..870 | 47..916 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:50:21 Download gff for
IP09589.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14695-RA | 1..870 | 47..916 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:25:13 Download gff for
IP09589.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14695-RA | 1..870 | 47..916 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:51:20 Download gff for
IP09589.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14695-RA | 1..1116 | 1..1116 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:50:56 Download gff for
IP09589.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14695-RA | 1..1116 | 1..1116 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:32:01 Download gff for
IP09589.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14695-RA | 1..870 | 47..916 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:50:21 Download gff for
IP09589.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14695-RA | 1..1116 | 1..1116 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:02:09 Download gff for
IP09589.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 10878204..10879319 | 1..1116 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:02:09 Download gff for
IP09589.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 10878204..10879319 | 1..1116 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:02:09 Download gff for
IP09589.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 10878204..10879319 | 1..1116 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:50:56 Download gff for
IP09589.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 6703926..6705041 | 1..1116 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:10:33 Download gff for
IP09589.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 10619035..10620150 | 1..1116 | 100 | | Minus |
IP09589.hyp Sequence
Translation from 0 to 915
> IP09589.hyp
EQQYSYFSDFPSGEKMALVKTYTIDNNSIPWILWLPPLTEVDRKSPGGRF
TFDGPKVVAFHFVKNRHGDTLDKWISLLDELAQEYAGRILFGLRDISNIG
EFNPNLNPDDFGSYRKGLPPRIYGKDCEGRVYDMHKLVNAKYLREFCDQL
LADQLFRAVVLGATASLDSKPMNYFELREESSSDMLVMLYDPACYYWPIQ
KRMLRKLIRLLASEDLPIVIVDKANNYLGVGFTRWLQMVNCHGSTIFTSP
RRDGWDIKLSVRMESTRGYLRYIARNRQPELIDFDADGEPRALEQAVEYI
QYLF*
IP09589.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:05:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14695-PA | 289 | CG14695-PA | 1..289 | 16..304 | 1541 | 100 | Plus |
IP09589.pep Sequence
Translation from 46 to 915
> IP09589.pep
MALVKTYTIDNNSIPWILWLPPLTEVDRKSPGGRFTFDGPKVVAFHFVKN
RHGDTLDKWISLLDELAQEYAGRILFGLRDISNIGEFNPNLNPDDFGSYR
KGLPPRIYGKDCEGRVYDMHKLVNAKYLREFCDQLLADQLFRAVVLGATA
SLDSKPMNYFELREESSSDMLVMLYDPACYYWPIQKRMLRKLIRLLASED
LPIVIVDKANNYLGVGFTRWLQMVNCHGSTIFTSPRRDGWDIKLSVRMES
TRGYLRYIARNRQPELIDFDADGEPRALEQAVEYIQYLF*
IP09589.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 14:00:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF16173-PA | 282 | GF16173-PA | 1..279 | 1..288 | 743 | 50.5 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 14:00:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG17255-PA | 286 | GG17255-PA | 1..286 | 1..289 | 1291 | 84.1 | Plus |
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 14:00:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dgri\GH19432-PA | 268 | GH19432-PA | 3..261 | 30..289 | 625 | 46.2 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:43:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14695-PA | 289 | CG14695-PA | 1..289 | 1..289 | 1541 | 100 | Plus |
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 14:00:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dper\GL12059-PA | 291 | GL12059-PA | 1..287 | 1..289 | 869 | 54.6 | Plus |
Dper\GL12567-PA | 215 | GL12567-PA | 2..211 | 80..289 | 655 | 55.7 | Plus |
Dper\GL12031-PA | 121 | GL12031-PA | 1..117 | 173..289 | 404 | 59.8 | Plus |
Dper\GL12029-PA | 59 | GL12029-PA | 2..59 | 80..137 | 178 | 53.4 | Plus |
Dper\GL10245-PA | 489 | GL10245-PA | 250..488 | 37..279 | 154 | 25.7 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 14:00:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA13184-PA | 291 | GA13184-PA | 1..287 | 1..289 | 868 | 54 | Plus |
Dpse\GA30233-PA | 214 | GA30233-PA | 2..205 | 80..289 | 615 | 54.8 | Plus |
Dpse\GA24137-PB | 490 | GA24137-PB | 251..489 | 37..279 | 155 | 25.7 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 14:00:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM26139-PA | 289 | GM26139-PA | 1..289 | 1..289 | 1432 | 92.7 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 14:00:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD20693-PA | 289 | GD20693-PA | 1..289 | 1..289 | 1451 | 93.8 | Plus |
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 14:00:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dwil\GK18945-PA | 292 | GK18945-PA | 2..285 | 3..289 | 626 | 45.3 | Plus |
Dwil\GK22252-PA | 489 | GK22252-PA | 250..488 | 37..279 | 151 | 26 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 14:00:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE24657-PA | 282 | GE24657-PA | 1..282 | 1..289 | 1266 | 81.7 | Plus |